RNA–Protein interactions for RNA: ENST00000590171.1

CIRBP-226, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-226ENST00000590171 ATP6V1AP38606 617 aa27.78■■■□□ 2.04
CIRBP-226ENST00000590171 SYT17Q9BSW7 474 aa27.78■■■□□ 2.04
CIRBP-226ENST00000590171 AKAP4Q5JQC9 854 aa27.77■■■□□ 2.04
CIRBP-226ENST00000590171 AMIGO3Q86WK7 504 aa27.77■■■□□ 2.04
CIRBP-226ENST00000590171 POLD1P28340 1107 aa27.76■■■□□ 2.03
CIRBP-226ENST00000590171 FLAD1Q8NFF5 587 aa27.76■■■□□ 2.03
CIRBP-226ENST00000590171 U2SURPO15042 1029 aaKnown RBP27.75■■■□□ 2.03
CIRBP-226ENST00000590171 SLC4A9Q96Q91 983 aa27.75■■■□□ 2.03
CIRBP-226ENST00000590171 SMIM5Q71RC9 77 aa27.74■■■□□ 2.03
CIRBP-226ENST00000590171 NFATC2IPQ8NCF5 419 aa27.74■■■□□ 2.03
CIRBP-226ENST00000590171 MAP3K5Q99683 1374 aa27.73■■■□□ 2.03
CIRBP-226ENST00000590171 MTHFSDQ2M296 383 aaKnown RBP27.73■■■□□ 2.03
CIRBP-226ENST00000590171 RBM42Q9BTD8 480 aaKnown RBP27.73■■■□□ 2.03
CIRBP-226ENST00000590171 UBR3Q6ZT12 1888 aa27.72■■■□□ 2.03
CIRBP-226ENST00000590171 PHF14O94880 888 aa27.72■■■□□ 2.03
CIRBP-226ENST00000590171 PPP2R1AP30153 589 aa27.72■■■□□ 2.03
CIRBP-226ENST00000590171 MSL1Q68DK7 614 aa27.72■■■□□ 2.03
CIRBP-226ENST00000590171 SCN11AQ9UI33 1791 aa27.72■■■□□ 2.03
CIRBP-226ENST00000590171 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.71■■■□□ 2.03
CIRBP-226ENST00000590171 LGR6Q9HBX8 967 aa27.71■■■□□ 2.03
CIRBP-226ENST00000590171 ZNF831Q5JPB2 1677 aa27.71■■■□□ 2.03
CIRBP-226ENST00000590171 SSFA2P28290 1259 aa27.7■■■□□ 2.02
CIRBP-226ENST00000590171 CFAP53Q96M91 514 aa27.7■■■□□ 2.02
CIRBP-226ENST00000590171 DCAF8L1A6NGE4 600 aa27.69■■■□□ 2.02
CIRBP-226ENST00000590171 GNPATO15228 680 aa27.69■■■□□ 2.02
CIRBP-226ENST00000590171 MRC1P22897 1456 aa27.69■■■□□ 2.02
CIRBP-226ENST00000590171 RNMTO43148 476 aaKnown RBP27.68■■■□□ 2.02
CIRBP-226ENST00000590171 SLC52A2Q9HAB3 445 aa27.68■■■□□ 2.02
CIRBP-226ENST00000590171 KLHL34Q8N239 644 aa27.67■■■□□ 2.02
CIRBP-226ENST00000590171 ADAMTS7Q9UKP4 1686 aa27.67■■■□□ 2.02
CIRBP-226ENST00000590171 PTCD1O75127 700 aaKnown RBP27.66■■■□□ 2.02
CIRBP-226ENST00000590171 COL5A3P25940 1745 aaPredicted RBP27.65■■■□□ 2.02
CIRBP-226ENST00000590171 CNTNAP4Q9C0A0 1308 aa27.63■■■□□ 2.01
CIRBP-226ENST00000590171 RSPH6AQ9H0K4 717 aa27.62■■■□□ 2.01
CIRBP-226ENST00000590171 RC3H1Q5TC82 1133 aaKnown RBP27.61■■■□□ 2.01
CIRBP-226ENST00000590171 GAS2L2Q8NHY3 880 aa27.61■■■□□ 2.01
CIRBP-226ENST00000590171 NUDCQ9Y266 331 aa27.61■■■□□ 2.01
CIRBP-226ENST00000590171 RTCBQ9Y3I0 505 aaKnown RBP27.61■■■□□ 2.01
CIRBP-226ENST00000590171 CICQ96RK0 1608 aaPredicted RBP27.6■■■□□ 2.01
CIRBP-226ENST00000590171 PRKAR2BP31323 418 aa27.6■■■□□ 2.01
CIRBP-226ENST00000590171 TJP1Q07157 1748 aa27.6■■■□□ 2.01
CIRBP-226ENST00000590171 NLGN2Q8NFZ4 835 aa27.59■■■□□ 2.01
CIRBP-226ENST00000590171 PHACTR3Q96KR7 559 aa27.59■■■□□ 2.01
CIRBP-226ENST00000590171 VIRMAQ69YN4 1812 aaKnown RBP27.58■■■□□ 2.01
CIRBP-226ENST00000590171 SLC39A6Q13433 755 aa27.58■■■□□ 2.01
CIRBP-226ENST00000590171 GNAT3A8MTJ3 354 aa27.57■■■□□ 2
CIRBP-226ENST00000590171 U2AF1L5P0DN76 240 aaPredicted RBP27.57■■■□□ 2
CIRBP-226ENST00000590171 U2AF1Q01081 240 aaKnown RBP eCLIP27.57■■■□□ 2
CIRBP-226ENST00000590171 KCPQ6ZWJ8 1503 aa27.57■■■□□ 2
CIRBP-226ENST00000590171 RPS6KA4O75676 772 aa27.56■■■□□ 2
CIRBP-226ENST00000590171 TRAPPC3LQ5T215 181 aa27.56■■■□□ 2
CIRBP-226ENST00000590171 CRKLP46109 303 aaKnown RBP27.55■■■□□ 2
CIRBP-226ENST00000590171 IL17REQ8NFR9 667 aa27.55■■■□□ 2
CIRBP-226ENST00000590171 ADRA2BP18089 450 aa27.54■■■□□ 2
CIRBP-226ENST00000590171 YY1P25490 414 aa27.54■■■□□ 2
CIRBP-226ENST00000590171 ARHGEF1Q92888 912 aaKnown RBP27.54■■■□□ 2
CIRBP-226ENST00000590171 DNAJC10Q8IXB1 793 aa27.53■■■□□ 2
CIRBP-226ENST00000590171 MYH14Q7Z406 1995 aaKnown RBP27.53■■■□□ 2
CIRBP-226ENST00000590171 FCHSD2O94868 740 aa27.52■■■□□ 2
CIRBP-226ENST00000590171 TEFQ10587 303 aa27.51■■□□□ 1.99
CIRBP-226ENST00000590171 CD2APQ9Y5K6 639 aa27.51■■□□□ 1.99
CIRBP-226ENST00000590171 CEMIPQ8WUJ3 1361 aa27.5■■□□□ 1.99
CIRBP-226ENST00000590171 GPR162Q16538 588 aa27.5■■□□□ 1.99
CIRBP-226ENST00000590171 INTS5Q6P9B9 1019 aaKnown RBP27.5■■□□□ 1.99
CIRBP-226ENST00000590171 RFC4P35249 363 aa27.49■■□□□ 1.99
CIRBP-226ENST00000590171 DDX10Q13206 875 aaKnown RBP27.49■■□□□ 1.99
CIRBP-226ENST00000590171 UBR2Q8IWV8 1755 aa27.49■■□□□ 1.99
CIRBP-226ENST00000590171 C4AP0C0L4 1744 aa27.49■■□□□ 1.99
CIRBP-226ENST00000590171 PELP1Q8IZL8 1130 aaKnown RBP27.48■■□□□ 1.99
CIRBP-226ENST00000590171 MMP10P09238 476 aa27.47■■□□□ 1.99
CIRBP-226ENST00000590171 CYP19A1P11511 503 aaPredicted RBP27.47■■□□□ 1.99
CIRBP-226ENST00000590171 GYS1P13807 737 aa27.47■■□□□ 1.99
CIRBP-226ENST00000590171 CCDC87Q9NVE4 849 aa27.47■■□□□ 1.99
CIRBP-226ENST00000590171 SIPA1L3O60292 1781 aaPredicted RBP27.47■■□□□ 1.99
CIRBP-226ENST00000590171 TTC5Q8N0Z6 440 aa27.46■■□□□ 1.99
CIRBP-226ENST00000590171 VSIG10Q8N0Z9 540 aa27.46■■□□□ 1.99
CIRBP-226ENST00000590171 NLGN1Q8N2Q7 840 aa27.46■■□□□ 1.99
CIRBP-226ENST00000590171 ZNF790Q6PG37 636 aa27.44■■□□□ 1.98
CIRBP-226ENST00000590171 SRP68Q9UHB9 627 aaKnown RBP27.44■■□□□ 1.98
CIRBP-226ENST00000590171 UTRNP46939 3433 aa27.44■■□□□ 1.98
CIRBP-226ENST00000590171 USP42Q9H9J4 1324 aaKnown RBP27.43■■□□□ 1.98
CIRBP-226ENST00000590171 RALBP1Q15311 655 aa27.43■■□□□ 1.98
CIRBP-226ENST00000590171 ZNF496Q96IT1 587 aaPredicted RBP27.43■■□□□ 1.98
CIRBP-226ENST00000590171 SOS1Q07889 1333 aaPredicted RBP27.42■■□□□ 1.98
CIRBP-226ENST00000590171 YBX3P16989 372 aaKnown RBP eCLIP27.42■■□□□ 1.98
CIRBP-226ENST00000590171 ZBTB1Q9Y2K1 713 aa27.42■■□□□ 1.98
CIRBP-226ENST00000590171 MCM10Q7L590 875 aa27.41■■□□□ 1.98
CIRBP-226ENST00000590171 HEG1Q9ULI3 1381 aa27.4■■□□□ 1.98
CIRBP-226ENST00000590171 RTF1Q92541 710 aaKnown RBP27.4■■□□□ 1.98
CIRBP-226ENST00000590171 BTBD11A6QL63 1104 aa27.38■■□□□ 1.97
CIRBP-226ENST00000590171 DCTN1Q14203 1278 aa27.38■■□□□ 1.97
CIRBP-226ENST00000590171 PLEKHF1Q96S99 279 aa27.38■■□□□ 1.97
CIRBP-226ENST00000590171 COL15A1P39059 1388 aa27.37■■□□□ 1.97
CIRBP-226ENST00000590171 KCNQ3O43525 872 aa27.37■■□□□ 1.97
CIRBP-226ENST00000590171 FKBP8Q14318 412 aa27.37■■□□□ 1.97
CIRBP-226ENST00000590171 C10orf71Q711Q0 1435 aa27.36■■□□□ 1.97
CIRBP-226ENST00000590171 HTATSF1O43719 755 aaKnown RBP27.36■■□□□ 1.97
CIRBP-226ENST00000590171 FMNL2Q96PY5 1086 aa27.36■■□□□ 1.97
CIRBP-226ENST00000590171 STARD3NLO95772 234 aa27.35■■□□□ 1.97
CIRBP-226ENST00000590171 PARP3Q9Y6F1 533 aa27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms