RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 YBX3P16989 372 aaKnown RBP eCLIP24.48■■□□□ 1.518e-10■□□□□ 8.8
PRKCSH-211ENST00000590098 SSFA2P28290 1259 aa24.48■■□□□ 1.51
PRKCSH-211ENST00000590098 ITPK1Q13572 414 aa24.48■■□□□ 1.51
PRKCSH-211ENST00000590098 AMOTQ4VCS5 1084 aa24.48■■□□□ 1.51
PRKCSH-211ENST00000590098 DCAF5Q96JK2 942 aa24.48■■□□□ 1.51
PRKCSH-211ENST00000590098 ZNF530Q6P9A1 599 aaPredicted RBP24.47■■□□□ 1.51
PRKCSH-211ENST00000590098 CD2APQ9Y5K6 639 aa24.46■■□□□ 1.51
PRKCSH-211ENST00000590098 KIF7Q2M1P5 1343 aa24.44■■□□□ 1.5
PRKCSH-211ENST00000590098 GNPATO15228 680 aa24.44■■□□□ 1.5
PRKCSH-211ENST00000590098 GRIN3BO60391 1043 aa24.44■■□□□ 1.5
PRKCSH-211ENST00000590098 C1orf141Q5JVX7 400 aa24.44■■□□□ 1.5
PRKCSH-211ENST00000590098 AEBP1Q8IUX7 1158 aa24.44■■□□□ 1.5
PRKCSH-211ENST00000590098 SULT6B1Q6IMI4 303 aa24.43■■□□□ 1.5
PRKCSH-211ENST00000590098 RBM42Q9BTD8 480 aaKnown RBP24.43■■□□□ 1.5
PRKCSH-211ENST00000590098 MTHFSP49914 203 aa24.42■■□□□ 1.5
PRKCSH-211ENST00000590098 CABP4P57796 275 aa24.42■■□□□ 1.5
PRKCSH-211ENST00000590098 AMER1Q5JTC6 1135 aaPredicted RBP24.42■■□□□ 1.5
PRKCSH-211ENST00000590098 SLC4A9Q96Q91 983 aa24.42■■□□□ 1.5
PRKCSH-211ENST00000590098 IL13P35225 146 aa24.4■■□□□ 1.5
PRKCSH-211ENST00000590098 KDM6AO15550 1401 aaPredicted RBP24.39■■□□□ 1.5
PRKCSH-211ENST00000590098 ZNF831Q5JPB2 1677 aa24.39■■□□□ 1.49
PRKCSH-211ENST00000590098 RTCBQ9Y3I0 505 aaKnown RBP24.38■■□□□ 1.49
PRKCSH-211ENST00000590098 KDRP35968 1356 aa24.38■■□□□ 1.49
PRKCSH-211ENST00000590098 TRAPPC3LQ5T215 181 aa24.37■■□□□ 1.49
PRKCSH-211ENST00000590098 RC3H1Q5TC82 1133 aaKnown RBP24.35■■□□□ 1.49
PRKCSH-211ENST00000590098 NFATC2IPQ8NCF5 419 aa24.35■■□□□ 1.49
PRKCSH-211ENST00000590098 C1QTNF8P60827 252 aa24.34■■□□□ 1.49
PRKCSH-211ENST00000590098 WWC3Q9ULE0 1092 aa24.34■■□□□ 1.49
PRKCSH-211ENST00000590098 COL5A3P25940 1745 aaPredicted RBP24.34■■□□□ 1.49
PRKCSH-211ENST00000590098 PTCD1O75127 700 aaKnown RBP24.33■■□□□ 1.49
PRKCSH-211ENST00000590098 CNTNAP4Q9C0A0 1308 aa24.33■■□□□ 1.48
PRKCSH-211ENST00000590098 MMP10P09238 476 aa24.32■■□□□ 1.48
PRKCSH-211ENST00000590098 ADRA2BP18089 450 aa24.32■■□□□ 1.48
PRKCSH-211ENST00000590098 CC2D1BQ5T0F9 858 aaKnown RBP24.32■■□□□ 1.48
PRKCSH-211ENST00000590098 SCN11AQ9UI33 1791 aa24.31■■□□□ 1.48
PRKCSH-211ENST00000590098 PER1O15534 1290 aaPredicted RBP24.31■■□□□ 1.48
PRKCSH-211ENST00000590098 AKAP4Q5JQC9 854 aa24.31■■□□□ 1.48
PRKCSH-211ENST00000590098 NLGN1Q8N2Q7 840 aa24.31■■□□□ 1.48
PRKCSH-211ENST00000590098 RPS6KA4O75676 772 aa24.3■■□□□ 1.48
PRKCSH-211ENST00000590098 RFC4P35249 363 aa24.3■■□□□ 1.48
PRKCSH-211ENST00000590098 ARHGEF1Q92888 912 aaKnown RBP24.3■■□□□ 1.48
PRKCSH-211ENST00000590098 HMOX1P09601 288 aa24.29■■□□□ 1.48
PRKCSH-211ENST00000590098 MYH14Q7Z406 1995 aaKnown RBP24.29■■□□□ 1.48
PRKCSH-211ENST00000590098 DIAPH1O60610 1272 aaKnown RBP24.28■■□□□ 1.48
PRKCSH-211ENST00000590098 GIGYF1O75420 1035 aaPredicted RBP24.26■■□□□ 1.47
PRKCSH-211ENST00000590098 CNGB1Q14028 1251 aaPredicted RBP24.25■■□□□ 1.47
PRKCSH-211ENST00000590098 SLC52A2Q9HAB3 445 aa24.25■■□□□ 1.47
PRKCSH-211ENST00000590098 VIRMAQ69YN4 1812 aaKnown RBP24.24■■□□□ 1.47
PRKCSH-211ENST00000590098 SENP3-EIF4A1A0A087X0R7 540 aa24.24■■□□□ 1.47
PRKCSH-211ENST00000590098 GYS1P13807 737 aa24.24■■□□□ 1.47
PRKCSH-211ENST00000590098 CRKLP46109 303 aaKnown RBP24.24■■□□□ 1.47
PRKCSH-211ENST00000590098 LGR6Q9HBX8 967 aa24.24■■□□□ 1.47
PRKCSH-211ENST00000590098 CICQ96RK0 1608 aaPredicted RBP24.23■■□□□ 1.47
PRKCSH-211ENST00000590098 KIF13BQ9NQT8 1826 aa24.23■■□□□ 1.47
PRKCSH-211ENST00000590098 C4AP0C0L4 1744 aa24.22■■□□□ 1.47
PRKCSH-211ENST00000590098 TJP1Q07157 1748 aa24.22■■□□□ 1.47
PRKCSH-211ENST00000590098 NPC1L1Q9UHC9 1359 aa24.22■■□□□ 1.47
PRKCSH-211ENST00000590098 RNMTO43148 476 aaKnown RBP24.22■■□□□ 1.47
PRKCSH-211ENST00000590098 PARP3Q9Y6F1 533 aa24.22■■□□□ 1.47
PRKCSH-211ENST00000590098 ATP10DQ9P241 1426 aa24.21■■□□□ 1.47
PRKCSH-211ENST00000590098 TGFB2P61812 414 aa24.21■■□□□ 1.47
PRKCSH-211ENST00000590098 MTHFSDQ2M296 383 aaKnown RBP24.21■■□□□ 1.47
PRKCSH-211ENST00000590098 CCDC87Q9NVE4 849 aa24.21■■□□□ 1.47
PRKCSH-211ENST00000590098 A0A0G2JLW4 131 aa24.19■■□□□ 1.46
PRKCSH-211ENST00000590098 PXDNLA1KZ92 1463 aa24.19■■□□□ 1.46
PRKCSH-211ENST00000590098 N4BP2Q86UW6 1770 aaPredicted RBP24.19■■□□□ 1.46
PRKCSH-211ENST00000590098 U2SURPO15042 1029 aaKnown RBP24.18■■□□□ 1.46
PRKCSH-211ENST00000590098 MRC1P22897 1456 aa24.18■■□□□ 1.46
PRKCSH-211ENST00000590098 SLC39A6Q13433 755 aa24.17■■□□□ 1.46
PRKCSH-211ENST00000590098 INTS5Q6P9B9 1019 aaKnown RBP24.17■■□□□ 1.46
PRKCSH-211ENST00000590098 DNAJC10Q8IXB1 793 aa24.17■■□□□ 1.46
PRKCSH-211ENST00000590098 SRP68Q9UHB9 627 aaKnown RBP24.17■■□□□ 1.46
PRKCSH-211ENST00000590098 C10orf71Q711Q0 1435 aa24.17■■□□□ 1.46
PRKCSH-211ENST00000590098 USP42Q9H9J4 1324 aaKnown RBP24.16■■□□□ 1.46
PRKCSH-211ENST00000590098 ADCY9O60503 1353 aa24.16■■□□□ 1.46
PRKCSH-211ENST00000590098 ZNF526Q8TF50 670 aaPredicted RBP24.15■■□□□ 1.46
PRKCSH-211ENST00000590098 GPBP1L1Q9HC44 474 aaPredicted RBP24.15■■□□□ 1.46
PRKCSH-211ENST00000590098 KIAA1551Q9HCM1 1747 aa24.15■■□□□ 1.46
PRKCSH-211ENST00000590098 COL3A1P02461 1466 aaPredicted RBP24.14■■□□□ 1.46
PRKCSH-211ENST00000590098 ZPR1O75312 459 aa24.14■■□□□ 1.45
PRKCSH-211ENST00000590098 DPEP1P16444 411 aa24.14■■□□□ 1.45
PRKCSH-211ENST00000590098 FKBP8Q14318 412 aa24.14■■□□□ 1.45
PRKCSH-211ENST00000590098 BCS1LQ9Y276 419 aa24.14■■□□□ 1.45
PRKCSH-211ENST00000590098 ADAMTS7Q9UKP4 1686 aa24.14■■□□□ 1.45
PRKCSH-211ENST00000590098 CYP19A1P11511 503 aaPredicted RBP24.13■■□□□ 1.45
PRKCSH-211ENST00000590098 KCNA3P22001 575 aa24.12■■□□□ 1.45
PRKCSH-211ENST00000590098 GAS2L2Q8NHY3 880 aa24.12■■□□□ 1.45
PRKCSH-211ENST00000590098 CFAP53Q96M91 514 aa24.12■■□□□ 1.45
PRKCSH-211ENST00000590098 KCPQ6ZWJ8 1503 aa24.11■■□□□ 1.45
PRKCSH-211ENST00000590098 TTC5Q8N0Z6 440 aa24.11■■□□□ 1.45
PRKCSH-211ENST00000590098 VSIG10Q8N0Z9 540 aa24.11■■□□□ 1.45
PRKCSH-211ENST00000590098 SOS1Q07889 1333 aaPredicted RBP24.1■■□□□ 1.45
PRKCSH-211ENST00000590098 GNAT3A8MTJ3 354 aa24.1■■□□□ 1.45
PRKCSH-211ENST00000590098 DDR1Q08345 913 aa24.1■■□□□ 1.45
PRKCSH-211ENST00000590098 USPL1Q5W0Q7 1092 aa24.1■■□□□ 1.45
PRKCSH-211ENST00000590098 FCHSD2O94868 740 aa24.09■■□□□ 1.45
PRKCSH-211ENST00000590098 TEFQ10587 303 aa24.09■■□□□ 1.45
PRKCSH-211ENST00000590098 ARHGAP27Q6ZUM4 889 aa24.08■■□□□ 1.45
PRKCSH-211ENST00000590098 BRCA1P38398 1863 aaKnown RBP24.08■■□□□ 1.45
PRKCSH-211ENST00000590098 UBR2Q8IWV8 1755 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms