RNA–Protein interactions for RNA: ENST00000590034.2

SF3A2-205, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 3

Gene SF3A2, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-205ENST00000590034 COL5A3P25940 1745 aaPredicted RBP19.23■□□□□ 0.67
SF3A2-205ENST00000590034 KIAA1551Q9HCM1 1747 aa19.23■□□□□ 0.67
SF3A2-205ENST00000590034 GNPATO15228 680 aa19.23■□□□□ 0.67
SF3A2-205ENST00000590034 KIF13BQ9NQT8 1826 aa19.23■□□□□ 0.67
SF3A2-205ENST00000590034 ZNF831Q5JPB2 1677 aa19.22■□□□□ 0.67
SF3A2-205ENST00000590034 ATP6V1AP38606 617 aa19.22■□□□□ 0.67
SF3A2-205ENST00000590034 PLEKHG2Q9H7P9 1386 aa19.21■□□□□ 0.67
SF3A2-205ENST00000590034 SLC4A9Q96Q91 983 aa19.21■□□□□ 0.67
SF3A2-205ENST00000590034 KDM6AO15550 1401 aaPredicted RBP19.2■□□□□ 0.66
SF3A2-205ENST00000590034 MYH14Q7Z406 1995 aaKnown RBP19.19■□□□□ 0.66
SF3A2-205ENST00000590034 N4BP2Q86UW6 1770 aaPredicted RBP19.19■□□□□ 0.66
SF3A2-205ENST00000590034 CICQ96RK0 1608 aaPredicted RBP19.18■□□□□ 0.66
SF3A2-205ENST00000590034 C4AP0C0L4 1744 aa19.18■□□□□ 0.66
SF3A2-205ENST00000590034 CLSPNQ9HAW4 1339 aa19.18■□□□□ 0.66
SF3A2-205ENST00000590034 PANK3Q9H999 370 aa19.17■□□□□ 0.66
SF3A2-205ENST00000590034 PXDNLA1KZ92 1463 aa19.16■□□□□ 0.66
SF3A2-205ENST00000590034 MMP10P09238 476 aa19.16■□□□□ 0.66
SF3A2-205ENST00000590034 ERVV-2B6SEH9 535 aa19.15■□□□□ 0.66
SF3A2-205ENST00000590034 HSPA5P11021 654 aaKnown RBP19.15■□□□□ 0.66
SF3A2-205ENST00000590034 AEBP1Q8IUX7 1158 aa19.15■□□□□ 0.66
SF3A2-205ENST00000590034 ZNF526Q8TF50 670 aaPredicted RBP19.15■□□□□ 0.66
SF3A2-205ENST00000590034 DCAF5Q96JK2 942 aa19.15■□□□□ 0.66
SF3A2-205ENST00000590034 PCGF6Q9BYE7 350 aa19.15■□□□□ 0.66
SF3A2-205ENST00000590034 GPBP1L1Q9HC44 474 aaPredicted RBP19.15■□□□□ 0.66
SF3A2-205ENST00000590034 BRCA1P38398 1863 aaKnown RBP19.14■□□□□ 0.65
SF3A2-205ENST00000590034 RBM42Q9BTD8 480 aaKnown RBP19.14■□□□□ 0.65
SF3A2-205ENST00000590034 C10orf71Q711Q0 1435 aa19.14■□□□□ 0.65
SF3A2-205ENST00000590034 EIF4G2P78344 907 aaKnown RBP eCLIP19.13■□□□□ 0.65
SF3A2-205ENST00000590034 ZNF530Q6P9A1 599 aaPredicted RBP19.13■□□□□ 0.65
SF3A2-205ENST00000590034 RTCBQ9Y3I0 505 aaKnown RBP19.13■□□□□ 0.65
SF3A2-205ENST00000590034 TJP1Q07157 1748 aa19.12■□□□□ 0.65
SF3A2-205ENST00000590034 CNTNAP4Q9C0A0 1308 aa19.12■□□□□ 0.65
SF3A2-205ENST00000590034 HSP90AB1P08238 724 aaKnown RBP19.12■□□□□ 0.65
SF3A2-205ENST00000590034 PLEKHO1Q53GL0 409 aaPredicted RBP19.12■□□□□ 0.65
SF3A2-205ENST00000590034 TRAPPC3LQ5T215 181 aa19.12■□□□□ 0.65
SF3A2-205ENST00000590034 ARHGEF1Q92888 912 aaKnown RBP19.12■□□□□ 0.65
SF3A2-205ENST00000590034 SCN11AQ9UI33 1791 aa19.11■□□□□ 0.65
SF3A2-205ENST00000590034 GYS1P13807 737 aa19.1■□□□□ 0.65
SF3A2-205ENST00000590034 RC3H1Q5TC82 1133 aaKnown RBP19.1■□□□□ 0.65
SF3A2-205ENST00000590034 RPS6KA4O75676 772 aa19.09■□□□□ 0.65
SF3A2-205ENST00000590034 ADRA2BP18089 450 aa19.09■□□□□ 0.65
SF3A2-205ENST00000590034 CABP4P57796 275 aa19.09■□□□□ 0.65
SF3A2-205ENST00000590034 AMOTQ4VCS5 1084 aa19.09■□□□□ 0.65
SF3A2-205ENST00000590034 NLGN1Q8N2Q7 840 aa19.09■□□□□ 0.65
SF3A2-205ENST00000590034 ADAMTS7Q9UKP4 1686 aa19.08■□□□□ 0.65
SF3A2-205ENST00000590034 A0A0G2JLW4 131 aa19.08■□□□□ 0.64
SF3A2-205ENST00000590034 MORC1Q86VD1 984 aa19.08■□□□□ 0.64
SF3A2-205ENST00000590034 VIRMAQ69YN4 1812 aaKnown RBP19.08■□□□□ 0.64
SF3A2-205ENST00000590034 PTCD1O75127 700 aaKnown RBP19.07■□□□□ 0.64
SF3A2-205ENST00000590034 MTHFSP49914 203 aa19.07■□□□□ 0.64
SF3A2-205ENST00000590034 TGFB2P61812 414 aa19.07■□□□□ 0.64
SF3A2-205ENST00000590034 SULT6B1Q6IMI4 303 aa19.07■□□□□ 0.64
SF3A2-205ENST00000590034 KIF3CO14782 793 aa19.06■□□□□ 0.64
SF3A2-205ENST00000590034 NFATC2IPQ8NCF5 419 aa19.06■□□□□ 0.64
SF3A2-205ENST00000590034 ARFGEF1Q9Y6D6 1849 aa19.06■□□□□ 0.64
SF3A2-205ENST00000590034 DPEP1P16444 411 aa19.05■□□□□ 0.64
SF3A2-205ENST00000590034 HSPA6P17066 643 aa19.05■□□□□ 0.64
SF3A2-205ENST00000590034 IL13P35225 146 aa19.05■□□□□ 0.64
SF3A2-205ENST00000590034 RFC4P35249 363 aa19.05■□□□□ 0.64
SF3A2-205ENST00000590034 C1orf141Q5JVX7 400 aa19.05■□□□□ 0.64
SF3A2-205ENST00000590034 BCS1LQ9Y276 419 aa19.05■□□□□ 0.64
SF3A2-205ENST00000590034 CRKLP46109 303 aaKnown RBP19.04■□□□□ 0.64
SF3A2-205ENST00000590034 CCDC87Q9NVE4 849 aa19.04■□□□□ 0.64
SF3A2-205ENST00000590034 SRP68Q9UHB9 627 aaKnown RBP19.04■□□□□ 0.64
SF3A2-205ENST00000590034 KCNA3P22001 575 aa19.02■□□□□ 0.64
SF3A2-205ENST00000590034 AMER1Q5JTC6 1135 aaPredicted RBP19.02■□□□□ 0.64
SF3A2-205ENST00000590034 PARP3Q9Y6F1 533 aa19.02■□□□□ 0.64
SF3A2-205ENST00000590034 MRC1P22897 1456 aa19.02■□□□□ 0.63
SF3A2-205ENST00000590034 USP42Q9H9J4 1324 aaKnown RBP19.01■□□□□ 0.63
SF3A2-205ENST00000590034 DDR1Q08345 913 aa19.01■□□□□ 0.63
SF3A2-205ENST00000590034 FKBP8Q14318 412 aa19.01■□□□□ 0.63
SF3A2-205ENST00000590034 KNSTRNQ9Y448 316 aa19.01■□□□□ 0.63
SF3A2-205ENST00000590034 INTS5Q6P9B9 1019 aaKnown RBP19■□□□□ 0.63
SF3A2-205ENST00000590034 FCHSD2O94868 740 aa18.99■□□□□ 0.63
SF3A2-205ENST00000590034 ARHGAP27Q6ZUM4 889 aa18.99■□□□□ 0.63
SF3A2-205ENST00000590034 KCPQ6ZWJ8 1503 aa18.99■□□□□ 0.63
SF3A2-205ENST00000590034 DNAJC10Q8IXB1 793 aa18.98■□□□□ 0.63
SF3A2-205ENST00000590034 LGR6Q9HBX8 967 aa18.98■□□□□ 0.63
SF3A2-205ENST00000590034 AFDNP55196 1824 aaKnown RBP18.97■□□□□ 0.63
SF3A2-205ENST00000590034 AKAP4Q5JQC9 854 aa18.97■□□□□ 0.63
SF3A2-205ENST00000590034 SLC52A2Q9HAB3 445 aa18.97■□□□□ 0.63
SF3A2-205ENST00000590034 KIF7Q2M1P5 1343 aa18.97■□□□□ 0.63
SF3A2-205ENST00000590034 HMOX1P09601 288 aa18.96■□□□□ 0.63
SF3A2-205ENST00000590034 NMRK2Q9NPI5 230 aa18.96■□□□□ 0.63
SF3A2-205ENST00000590034 SBF1O95248 1867 aa18.96■□□□□ 0.63
SF3A2-205ENST00000590034 SOS1Q07889 1333 aaPredicted RBP18.96■□□□□ 0.63
SF3A2-205ENST00000590034 UBR2Q8IWV8 1755 aa18.96■□□□□ 0.63
SF3A2-205ENST00000590034 POLRMTO00411 1230 aaKnown RBP18.95■□□□□ 0.62
SF3A2-205ENST00000590034 SLC39A6Q13433 755 aa18.95■□□□□ 0.62
SF3A2-205ENST00000590034 NRXN2Q9P2S2 1712 aa18.94■□□□□ 0.62
SF3A2-205ENST00000590034 RNMTO43148 476 aaKnown RBP18.94■□□□□ 0.62
SF3A2-205ENST00000590034 TM4SF1P30408 202 aa18.94■□□□□ 0.62
SF3A2-205ENST00000590034 CHRNA5P30532 468 aa18.94■□□□□ 0.62
SF3A2-205ENST00000590034 IFFO2Q5TF58 517 aa18.94■□□□□ 0.62
SF3A2-205ENST00000590034 PIM2Q9P1W9 311 aa18.94■□□□□ 0.62
SF3A2-205ENST00000590034 C9orf131Q5VYM1 1079 aa18.93■□□□□ 0.62
SF3A2-205ENST00000590034 USPL1Q5W0Q7 1092 aa18.93■□□□□ 0.62
SF3A2-205ENST00000590034 CCER1Q8TC90 406 aaPredicted RBP18.93■□□□□ 0.62
SF3A2-205ENST00000590034 DLEC1Q9Y238 1755 aa18.92■□□□□ 0.62
SF3A2-205ENST00000590034 PER1O15534 1290 aaPredicted RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms