RNA–Protein interactions for RNA: ENST00000589675.5

DDX39A-210, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-210ENST00000589675 NPC1L1Q9UHC9 1359 aa15.17■□□□□ 0.02
DDX39A-210ENST00000589675 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.17■□□□□ 0.02
DDX39A-210ENST00000589675 ITPK1Q13572 414 aa15.17■□□□□ 0.02
DDX39A-210ENST00000589675 GPR162Q16538 588 aa15.17■□□□□ 0.02
DDX39A-210ENST00000589675 SULT6B1Q6IMI4 303 aa15.17■□□□□ 0.02
DDX39A-210ENST00000589675 AMIGO3Q86WK7 504 aa15.17■□□□□ 0.02
DDX39A-210ENST00000589675 AEBP1Q8IUX7 1158 aa15.17■□□□□ 0.02
DDX39A-210ENST00000589675 CD2APQ9Y5K6 639 aa15.17■□□□□ 0.02
DDX39A-210ENST00000589675 KDM6AO15550 1401 aaPredicted RBP15.17■□□□□ 0.02
DDX39A-210ENST00000589675 C1orf141Q5JVX7 400 aa15.16■□□□□ 0.02
DDX39A-210ENST00000589675 MSL1Q68DK7 614 aa15.16■□□□□ 0.02
DDX39A-210ENST00000589675 KLHL34Q8N239 644 aa15.16■□□□□ 0.02
DDX39A-210ENST00000589675 NLGN2Q8NFZ4 835 aa15.16■□□□□ 0.02
DDX39A-210ENST00000589675 SCN11AQ9UI33 1791 aa15.16■□□□□ 0.02
DDX39A-210ENST00000589675 COL5A3P25940 1745 aaPredicted RBP15.15■□□□□ 0.02
DDX39A-210ENST00000589675 MTHFSP49914 203 aa15.15■□□□□ 0.02
DDX39A-210ENST00000589675 RC3H1Q5TC82 1133 aaKnown RBP15.15■□□□□ 0.02
DDX39A-210ENST00000589675 CABP4P57796 275 aa15.14■□□□□ 0.01
DDX39A-210ENST00000589675 SLC4A9Q96Q91 983 aa15.14■□□□□ 0.01
DDX39A-210ENST00000589675 GNPATO15228 680 aa15.13■□□□□ 0.01
DDX39A-210ENST00000589675 PHF14O94880 888 aa15.13■□□□□ 0.01
DDX39A-210ENST00000589675 ZNF784Q8NCA9 323 aaPredicted RBP15.13■□□□□ 0.01
DDX39A-210ENST00000589675 MYH14Q7Z406 1995 aaKnown RBP15.13■□□□□ 0.01
DDX39A-210ENST00000589675 VIRMAQ69YN4 1812 aaKnown RBP15.13■□□□□ 0.01
DDX39A-210ENST00000589675 GRIN3BO60391 1043 aa15.12■□□□□ 0.01
DDX39A-210ENST00000589675 AKAP4Q5JQC9 854 aa15.12■□□□□ 0.01
DDX39A-210ENST00000589675 CICQ96RK0 1608 aaPredicted RBP15.12■□□□□ 0.01
DDX39A-210ENST00000589675 CNTNAP4Q9C0A0 1308 aa15.12■□□□□ 0.01
DDX39A-210ENST00000589675 ADRA2BP18089 450 aa15.11■□□□□ 0.01
DDX39A-210ENST00000589675 SMIM5Q71RC9 77 aa15.11■□□□□ 0.01
DDX39A-210ENST00000589675 NFATC2IPQ8NCF5 419 aa15.11■□□□□ 0.01
DDX39A-210ENST00000589675 RBM42Q9BTD8 480 aaKnown RBP15.11■□□□□ 0.01
DDX39A-210ENST00000589675 RTCBQ9Y3I0 505 aaKnown RBP15.11■□□□□ 0.01
DDX39A-210ENST00000589675 DIAPH1O60610 1272 aaKnown RBP15.1■□□□□ 0.01
DDX39A-210ENST00000589675 CC2D1BQ5T0F9 858 aaKnown RBP15.1■□□□□ 0.01
DDX39A-210ENST00000589675 TRAPPC3LQ5T215 181 aa15.1■□□□□ 0.01
DDX39A-210ENST00000589675 RPS6KA4O75676 772 aa15.09■□□□□ 0.01
DDX39A-210ENST00000589675 YBX3P16989 372 aaKnown RBP eCLIP15.09■□□□□ 0.01
DDX39A-210ENST00000589675 PELP1Q8IZL8 1130 aaKnown RBP15.09■□□□□ 0.01
DDX39A-210ENST00000589675 ADAMTS7Q9UKP4 1686 aa15.09■□□□□ 0.01
DDX39A-210ENST00000589675 KIF13BQ9NQT8 1826 aa15.08■□□□□ 0.01
DDX39A-210ENST00000589675 NLGN1Q8N2Q7 840 aa15.08■□□□□ 0
DDX39A-210ENST00000589675 MRC1P22897 1456 aa15.08■□□□□ 0
DDX39A-210ENST00000589675 TJP1Q07157 1748 aa15.07■□□□□ 0
DDX39A-210ENST00000589675 HMOX1P09601 288 aa15.07■□□□□ 0
DDX39A-210ENST00000589675 ARHGEF1Q92888 912 aaKnown RBP15.07■□□□□ 0
DDX39A-210ENST00000589675 SLC52A2Q9HAB3 445 aa15.07■□□□□ 0
DDX39A-210ENST00000589675 COL3A1P02461 1466 aaPredicted RBP15.07■□□□□ 0
DDX39A-210ENST00000589675 RNMTO43148 476 aaKnown RBP15.06■□□□□ 0
DDX39A-210ENST00000589675 PTCD1O75127 700 aaKnown RBP15.06■□□□□ 0
DDX39A-210ENST00000589675 LGR6Q9HBX8 967 aa15.06■□□□□ 0
DDX39A-210ENST00000589675 C4AP0C0L4 1744 aa15.06■□□□□ 0
DDX39A-210ENST00000589675 MMP10P09238 476 aa15.05■□□□□ -0
DDX39A-210ENST00000589675 MTHFSDQ2M296 383 aaKnown RBP15.05■□□□□ -0
DDX39A-210ENST00000589675 GYS1P13807 737 aa15.04■□□□□ -0
DDX39A-210ENST00000589675 RFC4P35249 363 aa15.04■□□□□ -0
DDX39A-210ENST00000589675 CRKLP46109 303 aaKnown RBP15.04■□□□□ -0
DDX39A-210ENST00000589675 TGFB2P61812 414 aa15.02■□□□□ -0
DDX39A-210ENST00000589675 INTS5Q6P9B9 1019 aaKnown RBP15.02■□□□□ -0
DDX39A-210ENST00000589675 UBR2Q8IWV8 1755 aa15.02□□□□□ -0.01
DDX39A-210ENST00000589675 KIAA1551Q9HCM1 1747 aa15.02□□□□□ -0.01
DDX39A-210ENST00000589675 VSIG10Q8N0Z9 540 aa15.01□□□□□ -0.01
DDX39A-210ENST00000589675 KCPQ6ZWJ8 1503 aa15.01□□□□□ -0.01
DDX39A-210ENST00000589675 C10orf71Q711Q0 1435 aa15□□□□□ -0.01
DDX39A-210ENST00000589675 GAS2L2Q8NHY3 880 aa15□□□□□ -0.01
DDX39A-210ENST00000589675 CCDC87Q9NVE4 849 aa15□□□□□ -0.01
DDX39A-210ENST00000589675 USP42Q9H9J4 1324 aaKnown RBP14.99□□□□□ -0.01
DDX39A-210ENST00000589675 SIPA1L3O60292 1781 aaPredicted RBP14.99□□□□□ -0.01
DDX39A-210ENST00000589675 N4BP2Q86UW6 1770 aaPredicted RBP14.99□□□□□ -0.01
DDX39A-210ENST00000589675 U2SURPO15042 1029 aaKnown RBP14.99□□□□□ -0.01
DDX39A-210ENST00000589675 CYP19A1P11511 503 aaPredicted RBP14.99□□□□□ -0.01
DDX39A-210ENST00000589675 DNAJC10Q8IXB1 793 aa14.99□□□□□ -0.01
DDX39A-210ENST00000589675 CFAP53Q96M91 514 aa14.99□□□□□ -0.01
DDX39A-210ENST00000589675 PARP3Q9Y6F1 533 aa14.99□□□□□ -0.01
DDX39A-210ENST00000589675 PXDNLA1KZ92 1463 aa14.99□□□□□ -0.01
DDX39A-210ENST00000589675 BRCA1P38398 1863 aaKnown RBP14.99□□□□□ -0.01
DDX39A-210ENST00000589675 GNAT3A8MTJ3 354 aa14.98□□□□□ -0.01
DDX39A-210ENST00000589675 SLC39A6Q13433 755 aa14.98□□□□□ -0.01
DDX39A-210ENST00000589675 SOS1Q07889 1333 aaPredicted RBP14.97□□□□□ -0.01
DDX39A-210ENST00000589675 C1QTNF8P60827 252 aa14.97□□□□□ -0.01
DDX39A-210ENST00000589675 IL17REQ8NFR9 667 aa14.97□□□□□ -0.01
DDX39A-210ENST00000589675 ADCY9O60503 1353 aa14.97□□□□□ -0.01
DDX39A-210ENST00000589675 TM4SF1P30408 202 aa14.96□□□□□ -0.01
DDX39A-210ENST00000589675 CNGB1Q14028 1251 aaPredicted RBP14.96□□□□□ -0.01
DDX39A-210ENST00000589675 FKBP8Q14318 412 aa14.96□□□□□ -0.01
DDX39A-210ENST00000589675 RSPH6AQ9H0K4 717 aa14.96□□□□□ -0.01
DDX39A-210ENST00000589675 SRP68Q9UHB9 627 aaKnown RBP14.96□□□□□ -0.01
DDX39A-210ENST00000589675 NUDCQ9Y266 331 aa14.96□□□□□ -0.01
DDX39A-210ENST00000589675 CEMIPQ8WUJ3 1361 aa14.96□□□□□ -0.02
DDX39A-210ENST00000589675 ARFGEF1Q9Y6D6 1849 aa14.95□□□□□ -0.02
DDX39A-210ENST00000589675 A0A0G2JLW4 131 aa14.95□□□□□ -0.02
DDX39A-210ENST00000589675 ZPR1O75312 459 aa14.95□□□□□ -0.02
DDX39A-210ENST00000589675 GIGYF1O75420 1035 aaPredicted RBP14.95□□□□□ -0.02
DDX39A-210ENST00000589675 PPP2R1AP30153 589 aa14.95□□□□□ -0.02
DDX39A-210ENST00000589675 TEFQ10587 303 aa14.95□□□□□ -0.02
DDX39A-210ENST00000589675 NARFQ9UHQ1 456 aa14.95□□□□□ -0.02
DDX39A-210ENST00000589675 CEP350Q5VT06 3117 aa14.95□□□□□ -0.02
DDX39A-210ENST00000589675 ATP10DQ9P241 1426 aa14.94□□□□□ -0.02
DDX39A-210ENST00000589675 DDR1Q08345 913 aa14.94□□□□□ -0.02
DDX39A-210ENST00000589675 ZNF790Q6PG37 636 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 145.1 ms