RNA–Protein interactions for RNA: ENST00000589492.1

BECN1-209, Transcript of beclin 1, humanhuman

TSL 2

Gene BECN1, Length 597 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-209ENST00000589492 ROCK2O75116 1388 aaKnown RBP9.3□□□□□ -0.92
BECN1-209ENST00000589492 FCHSD2O94868 740 aa9.3□□□□□ -0.92
BECN1-209ENST00000589492 SMC1BQ8NDV3 1235 aa9.3□□□□□ -0.92
BECN1-209ENST00000589492 ARFGEF1Q9Y6D6 1849 aa9.3□□□□□ -0.92
BECN1-209ENST00000589492 ITGB4P16144 1822 aa9.29□□□□□ -0.92
BECN1-209ENST00000589492 MMP10P09238 476 aa9.29□□□□□ -0.92
BECN1-209ENST00000589492 DPEP1P16444 411 aa9.29□□□□□ -0.92
BECN1-209ENST00000589492 FAM161AQ3B820 660 aa9.29□□□□□ -0.92
BECN1-209ENST00000589492 IP6K1Q92551 441 aa9.29□□□□□ -0.92
BECN1-209ENST00000589492 FBXO3Q9UK99 471 aa9.29□□□□□ -0.92
BECN1-209ENST00000589492 MAP2P11137 1827 aaKnown RBP9.28□□□□□ -0.92
BECN1-209ENST00000589492 SBNO2Q9Y2G9 1366 aa9.28□□□□□ -0.92
BECN1-209ENST00000589492 SSFA2P28290 1259 aa9.28□□□□□ -0.92
BECN1-209ENST00000589492 TGFB2P61812 414 aa9.28□□□□□ -0.92
BECN1-209ENST00000589492 MPRIPQ6WCQ1 1025 aa9.28□□□□□ -0.92
BECN1-209ENST00000589492 VSIG10Q8N0Z9 540 aa9.28□□□□□ -0.92
BECN1-209ENST00000589492 RNF181Q9P0P0 153 aa9.28□□□□□ -0.92
BECN1-209ENST00000589492 U3KPZ7 1027 aaPredicted RBP9.28□□□□□ -0.92
BECN1-209ENST00000589492 NSD3Q9BZ95 1437 aa9.28□□□□□ -0.92
BECN1-209ENST00000589492 SBF1O95248 1867 aa9.28□□□□□ -0.92
BECN1-209ENST00000589492 CD163L1Q9NR16 1453 aa9.28□□□□□ -0.92
BECN1-209ENST00000589492 EIF4G2P78344 907 aaKnown RBP eCLIP9.27□□□□□ -0.93
BECN1-209ENST00000589492 LINC00116Q8NCU8 138 aa9.27□□□□□ -0.93
BECN1-209ENST00000589492 SPINK5Q9NQ38 1064 aaPredicted RBP9.27□□□□□ -0.93
BECN1-209ENST00000589492 C4AP0C0L4 1744 aa9.26□□□□□ -0.93
BECN1-209ENST00000589492 GNPATO15228 680 aa9.26□□□□□ -0.93
BECN1-209ENST00000589492 FOXN1O15353 648 aa9.26□□□□□ -0.93
BECN1-209ENST00000589492 USHBP1Q8N6Y0 703 aa9.26□□□□□ -0.93
BECN1-209ENST00000589492 CARD11Q9BXL7 1154 aa9.26□□□□□ -0.93
BECN1-209ENST00000589492 KCNA3P22001 575 aa9.25□□□□□ -0.93
BECN1-209ENST00000589492 FBLN1P23142 703 aa9.25□□□□□ -0.93
BECN1-209ENST00000589492 HMGB2P26583 209 aaKnown RBP9.25□□□□□ -0.93
BECN1-209ENST00000589492 HOXC9P31274 260 aa9.25□□□□□ -0.93
BECN1-209ENST00000589492 MAP3K19Q56UN5 1328 aa9.25□□□□□ -0.93
BECN1-209ENST00000589492 TPRNQ4KMQ1 711 aa9.24□□□□□ -0.93
BECN1-209ENST00000589492 NBPF6Q5VWK0 638 aa9.24□□□□□ -0.93
BECN1-209ENST00000589492 SMARCC1Q92922 1105 aaPredicted RBP9.24□□□□□ -0.93
BECN1-209ENST00000589492 DCAF5Q96JK2 942 aa9.24□□□□□ -0.93
BECN1-209ENST00000589492 NBPF4Q96M43 638 aa9.24□□□□□ -0.93
BECN1-209ENST00000589492 CCDC87Q9NVE4 849 aa9.24□□□□□ -0.93
BECN1-209ENST00000589492 MKRN1Q9UHC7 482 aaKnown RBP9.24□□□□□ -0.93
BECN1-209ENST00000589492 LOC102724428A0A0B4J2F2 783 aa9.23□□□□□ -0.93
BECN1-209ENST00000589492 AMPHP49418 695 aa9.23□□□□□ -0.93
BECN1-209ENST00000589492 SIK1P57059 783 aa9.23□□□□□ -0.93
BECN1-209ENST00000589492 ITPK1Q13572 414 aa9.23□□□□□ -0.93
BECN1-209ENST00000589492 PCDH11XQ9BZA7 1347 aa9.23□□□□□ -0.93
BECN1-209ENST00000589492 PCDH11YQ9BZA8 1340 aa9.23□□□□□ -0.93
BECN1-209ENST00000589492 EDC4Q6P2E9 1401 aaKnown RBP9.22□□□□□ -0.93
BECN1-209ENST00000589492 CYP27B1O15528 508 aa9.22□□□□□ -0.93
BECN1-209ENST00000589492 TMC1Q8TDI8 760 aa9.22□□□□□ -0.93
BECN1-209ENST00000589492 RAPGEF4Q8WZA2 1011 aa9.22□□□□□ -0.93
BECN1-209ENST00000589492 PIGBQ92521 554 aa9.22□□□□□ -0.93
BECN1-209ENST00000589492 PRDM10Q9NQV6 1147 aa9.22□□□□□ -0.93
BECN1-209ENST00000589492 PIM2Q9P1W9 311 aa9.22□□□□□ -0.93
BECN1-209ENST00000589492 CGNL1Q0VF96 1302 aa9.22□□□□□ -0.93
BECN1-209ENST00000589492 TIAM2Q8IVF5 1701 aa9.22□□□□□ -0.93
BECN1-209ENST00000589492 VEGFAP15692 232 aaPredicted RBP9.21□□□□□ -0.94
BECN1-209ENST00000589492 TATP17735 454 aaPredicted RBP9.21□□□□□ -0.94
BECN1-209ENST00000589492 TMF1P82094 1093 aa9.21□□□□□ -0.94
BECN1-209ENST00000589492 RASSF7Q02833 373 aa9.21□□□□□ -0.94
BECN1-209ENST00000589492 CDCA8Q53HL2 280 aa9.21□□□□□ -0.94
BECN1-209ENST00000589492 DALRD3Q5D0E6 543 aaKnown RBP9.21□□□□□ -0.94
BECN1-209ENST00000589492 HDGFL2Q7Z4V5 671 aaPredicted RBP9.21□□□□□ -0.94
BECN1-209ENST00000589492 NLGN1Q8N2Q7 840 aa9.21□□□□□ -0.94
BECN1-209ENST00000589492 SLC12A5Q9H2X9 1139 aa9.21□□□□□ -0.94
BECN1-209ENST00000589492 A0A1W2PP64 1363 aa9.21□□□□□ -0.94
BECN1-209ENST00000589492 CCDC88AQ3V6T2 1871 aa9.21□□□□□ -0.94
BECN1-209ENST00000589492 ZNF316A6NFI3 1004 aaPredicted RBP9.2□□□□□ -0.94
BECN1-209ENST00000589492 GLTPD2A6NH11 291 aa9.2□□□□□ -0.94
BECN1-209ENST00000589492 GYS1P13807 737 aa9.2□□□□□ -0.94
BECN1-209ENST00000589492 CHRNA5P30532 468 aa9.2□□□□□ -0.94
BECN1-209ENST00000589492 ATP6V1AP38606 617 aa9.2□□□□□ -0.94
BECN1-209ENST00000589492 ABHD8Q96I13 439 aa9.2□□□□□ -0.94
BECN1-209ENST00000589492 PARP3Q9Y6F1 533 aa9.2□□□□□ -0.94
BECN1-209ENST00000589492 CTCFP49711 727 aaPredicted RBP9.19□□□□□ -0.94
BECN1-209ENST00000589492 LBX1P52954 281 aa9.19□□□□□ -0.94
BECN1-209ENST00000589492 TRAPPC3LQ5T215 181 aa9.19□□□□□ -0.94
BECN1-209ENST00000589492 ARHGEF1Q92888 912 aaKnown RBP9.19□□□□□ -0.94
BECN1-209ENST00000589492 CREBZFQ9NS37 354 aa9.19□□□□□ -0.94
BECN1-209ENST00000589492 ASAP1Q9ULH1 1129 aa9.19□□□□□ -0.94
BECN1-209ENST00000589492 RTCBQ9Y3I0 505 aaKnown RBP9.19□□□□□ -0.94
BECN1-209ENST00000589492 KDM6AO15550 1401 aaPredicted RBP9.19□□□□□ -0.94
BECN1-209ENST00000589492 POTECB2RU33 542 aa9.18□□□□□ -0.94
BECN1-209ENST00000589492 VASPP50552 380 aaPredicted RBP9.18□□□□□ -0.94
BECN1-209ENST00000589492 CNTNAP1P78357 1384 aa9.18□□□□□ -0.94
BECN1-209ENST00000589492 MLLT1Q03111 559 aaPredicted RBP9.18□□□□□ -0.94
BECN1-209ENST00000589492 RRS1Q15050 365 aaKnown RBP9.18□□□□□ -0.94
BECN1-209ENST00000589492 VIRMAQ69YN4 1812 aaKnown RBP9.18□□□□□ -0.94
BECN1-209ENST00000589492 AIDAQ96BJ3 306 aa9.18□□□□□ -0.94
BECN1-209ENST00000589492 COG3Q96JB2 828 aa9.18□□□□□ -0.94
BECN1-209ENST00000589492 ZC3H4Q9UPT8 1303 aaKnown RBP9.18□□□□□ -0.94
BECN1-209ENST00000589492 COL5A3P25940 1745 aaPredicted RBP9.17□□□□□ -0.94
BECN1-209ENST00000589492 SMG6Q86US8 1419 aaKnown RBP9.17□□□□□ -0.94
BECN1-209ENST00000589492 RTL1A6NKG5 1358 aa9.17□□□□□ -0.94
BECN1-209ENST00000589492 KDRP35968 1356 aa9.16□□□□□ -0.94
BECN1-209ENST00000589492 CCDC85CA6NKD9 419 aa9.16□□□□□ -0.94
BECN1-209ENST00000589492 POTEIP0CG38 1075 aa9.16□□□□□ -0.94
BECN1-209ENST00000589492 POTEJP0CG39 1038 aa9.16□□□□□ -0.94
BECN1-209ENST00000589492 HSPA5P11021 654 aaKnown RBP9.16□□□□□ -0.94
BECN1-209ENST00000589492 LMNB1P20700 586 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms