RNA–Protein interactions for RNA: ENST00000589214.1

ERCC1-209, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 3

Gene ERCC1, Length 674 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-209ENST00000589214 CFAP53Q96M91 514 aa20.46■□□□□ 0.87
ERCC1-209ENST00000589214 SLC16A10Q8TF71 515 aa20.45■□□□□ 0.86
ERCC1-209ENST00000589214 ITPK1Q13572 414 aa20.44■□□□□ 0.86
ERCC1-209ENST00000589214 AKAP4Q5JQC9 854 aa20.44■□□□□ 0.86
ERCC1-209ENST00000589214 COL23A1Q86Y22 540 aaPredicted RBP20.44■□□□□ 0.86
ERCC1-209ENST00000589214 LINC00116Q8NCU8 138 aa20.44■□□□□ 0.86
ERCC1-209ENST00000589214 MRC1P22897 1456 aa20.43■□□□□ 0.86
ERCC1-209ENST00000589214 ZNF831Q5JPB2 1677 aa20.43■□□□□ 0.86
ERCC1-209ENST00000589214 HMGB2P26583 209 aaKnown RBP20.43■□□□□ 0.86
ERCC1-209ENST00000589214 ATP6V1AP38606 617 aa20.43■□□□□ 0.86
ERCC1-209ENST00000589214 COL5A3P25940 1745 aaPredicted RBP20.43■□□□□ 0.86
ERCC1-209ENST00000589214 ADAMTS7Q9UKP4 1686 aa20.42■□□□□ 0.86
ERCC1-209ENST00000589214 PHF14O94880 888 aa20.42■□□□□ 0.86
ERCC1-209ENST00000589214 MTHFSDQ2M296 383 aaKnown RBP20.42■□□□□ 0.86
ERCC1-209ENST00000589214 ARXQ96QS3 562 aa20.42■□□□□ 0.86
ERCC1-209ENST00000589214 RBM42Q9BTD8 480 aaKnown RBP20.42■□□□□ 0.86
ERCC1-209ENST00000589214 FHDC1Q9C0D6 1143 aaPredicted RBP20.42■□□□□ 0.86
ERCC1-209ENST00000589214 AMIGO3Q86WK7 504 aa20.41■□□□□ 0.86
ERCC1-209ENST00000589214 POLD1P28340 1107 aa20.4■□□□□ 0.86
ERCC1-209ENST00000589214 MSL1Q68DK7 614 aa20.4■□□□□ 0.86
ERCC1-209ENST00000589214 NFATC2IPQ8NCF5 419 aa20.4■□□□□ 0.86
ERCC1-209ENST00000589214 TJP1Q07157 1748 aa20.39■□□□□ 0.86
ERCC1-209ENST00000589214 SMIM5Q71RC9 77 aa20.39■□□□□ 0.85
ERCC1-209ENST00000589214 FLAD1Q8NFF5 587 aa20.39■□□□□ 0.85
ERCC1-209ENST00000589214 SLC4A9Q96Q91 983 aa20.39■□□□□ 0.85
ERCC1-209ENST00000589214 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.38■□□□□ 0.85
ERCC1-209ENST00000589214 GNPATO15228 680 aa20.38■□□□□ 0.85
ERCC1-209ENST00000589214 RNMTO43148 476 aaKnown RBP20.38■□□□□ 0.85
ERCC1-209ENST00000589214 KLHL34Q8N239 644 aa20.38■□□□□ 0.85
ERCC1-209ENST00000589214 LGR6Q9HBX8 967 aa20.38■□□□□ 0.85
ERCC1-209ENST00000589214 NUDCQ9Y266 331 aa20.38■□□□□ 0.85
ERCC1-209ENST00000589214 CICQ96RK0 1608 aaPredicted RBP20.38■□□□□ 0.85
ERCC1-209ENST00000589214 MAP3K5Q99683 1374 aa20.37■□□□□ 0.85
ERCC1-209ENST00000589214 PTCD1O75127 700 aaKnown RBP20.37■□□□□ 0.85
ERCC1-209ENST00000589214 PRKAR2BP31323 418 aa20.37■□□□□ 0.85
ERCC1-209ENST00000589214 SYT17Q9BSW7 474 aa20.37■□□□□ 0.85
ERCC1-209ENST00000589214 SLC52A2Q9HAB3 445 aa20.37■□□□□ 0.85
ERCC1-209ENST00000589214 ZNF316A6NFI3 1004 aaPredicted RBP20.36■□□□□ 0.85
ERCC1-209ENST00000589214 SSFA2P28290 1259 aa20.36■□□□□ 0.85
ERCC1-209ENST00000589214 GAS2L2Q8NHY3 880 aa20.36■□□□□ 0.85
ERCC1-209ENST00000589214 RSPH6AQ9H0K4 717 aa20.36■□□□□ 0.85
ERCC1-209ENST00000589214 U2AF1L5P0DN76 240 aaPredicted RBP20.35■□□□□ 0.85
ERCC1-209ENST00000589214 U2AF1Q01081 240 aaKnown RBP eCLIP20.35■□□□□ 0.85
ERCC1-209ENST00000589214 KCPQ6ZWJ8 1503 aa20.33■□□□□ 0.85
ERCC1-209ENST00000589214 DCAF8L1A6NGE4 600 aa20.33■□□□□ 0.85
ERCC1-209ENST00000589214 CNTNAP4Q9C0A0 1308 aa20.32■□□□□ 0.84
ERCC1-209ENST00000589214 SIPA1L3O60292 1781 aaPredicted RBP20.32■□□□□ 0.84
ERCC1-209ENST00000589214 UBR2Q8IWV8 1755 aa20.32■□□□□ 0.84
ERCC1-209ENST00000589214 PHACTR3Q96KR7 559 aa20.32■□□□□ 0.84
ERCC1-209ENST00000589214 C4AP0C0L4 1744 aa20.32■□□□□ 0.84
ERCC1-209ENST00000589214 GNAT3A8MTJ3 354 aa20.31■□□□□ 0.84
ERCC1-209ENST00000589214 SLC39A6Q13433 755 aa20.31■□□□□ 0.84
ERCC1-209ENST00000589214 RALBP1Q15311 655 aa20.31■□□□□ 0.84
ERCC1-209ENST00000589214 RTCBQ9Y3I0 505 aaKnown RBP20.31■□□□□ 0.84
ERCC1-209ENST00000589214 MYH14Q7Z406 1995 aaKnown RBP20.31■□□□□ 0.84
ERCC1-209ENST00000589214 CRKLP46109 303 aaKnown RBP20.28■□□□□ 0.84
ERCC1-209ENST00000589214 TEFQ10587 303 aa20.28■□□□□ 0.84
ERCC1-209ENST00000589214 RC3H1Q5TC82 1133 aaKnown RBP20.28■□□□□ 0.84
ERCC1-209ENST00000589214 FCHSD2O94868 740 aa20.27■□□□□ 0.84
ERCC1-209ENST00000589214 DNAJC10Q8IXB1 793 aa20.27■□□□□ 0.84
ERCC1-209ENST00000589214 IL17REQ8NFR9 667 aa20.27■□□□□ 0.84
ERCC1-209ENST00000589214 NLGN2Q8NFZ4 835 aa20.27■□□□□ 0.84
ERCC1-209ENST00000589214 RPS6KA4O75676 772 aa20.26■□□□□ 0.83
ERCC1-209ENST00000589214 CEMIPQ8WUJ3 1361 aa20.25■□□□□ 0.83
ERCC1-209ENST00000589214 ADRA2BP18089 450 aa20.25■□□□□ 0.83
ERCC1-209ENST00000589214 TRAPPC3LQ5T215 181 aa20.25■□□□□ 0.83
ERCC1-209ENST00000589214 TTC5Q8N0Z6 440 aa20.25■□□□□ 0.83
ERCC1-209ENST00000589214 MYBBP1AQ9BQG0 1328 aaKnown RBP20.25■□□□□ 0.83
ERCC1-209ENST00000589214 ARHGEF1Q92888 912 aaKnown RBP20.24■□□□□ 0.83
ERCC1-209ENST00000589214 PRKRIP1Q9H875 184 aaPredicted RBP20.24■□□□□ 0.83
ERCC1-209ENST00000589214 RFC4P35249 363 aa20.22■□□□□ 0.83
ERCC1-209ENST00000589214 PELP1Q8IZL8 1130 aaKnown RBP20.22■□□□□ 0.83
ERCC1-209ENST00000589214 CCDC87Q9NVE4 849 aa20.22■□□□□ 0.83
ERCC1-209ENST00000589214 DLG5Q8TDM6 1919 aa20.21■□□□□ 0.83
ERCC1-209ENST00000589214 INTS5Q6P9B9 1019 aaKnown RBP20.21■□□□□ 0.83
ERCC1-209ENST00000589214 RTF1Q92541 710 aaKnown RBP20.21■□□□□ 0.83
ERCC1-209ENST00000589214 NEFMP07197 916 aa20.2■□□□□ 0.82
ERCC1-209ENST00000589214 MMP10P09238 476 aa20.2■□□□□ 0.82
ERCC1-209ENST00000589214 CYP19A1P11511 503 aaPredicted RBP20.2■□□□□ 0.82
ERCC1-209ENST00000589214 YY1P25490 414 aa20.2■□□□□ 0.82
ERCC1-209ENST00000589214 GPR162Q16538 588 aa20.2■□□□□ 0.82
ERCC1-209ENST00000589214 ZNF790Q6PG37 636 aa20.2■□□□□ 0.82
ERCC1-209ENST00000589214 MCM10Q7L590 875 aa20.2■□□□□ 0.82
ERCC1-209ENST00000589214 GYS1P13807 737 aa20.19■□□□□ 0.82
ERCC1-209ENST00000589214 DCTN1Q14203 1278 aa20.19■□□□□ 0.82
ERCC1-209ENST00000589214 VSIG10Q8N0Z9 540 aa20.19■□□□□ 0.82
ERCC1-209ENST00000589214 ZNF496Q96IT1 587 aaPredicted RBP20.19■□□□□ 0.82
ERCC1-209ENST00000589214 SRP68Q9UHB9 627 aaKnown RBP20.19■□□□□ 0.82
ERCC1-209ENST00000589214 ZBTB1Q9Y2K1 713 aa20.19■□□□□ 0.82
ERCC1-209ENST00000589214 CD2APQ9Y5K6 639 aa20.19■□□□□ 0.82
ERCC1-209ENST00000589214 HEG1Q9ULI3 1381 aa20.19■□□□□ 0.82
ERCC1-209ENST00000589214 SOS1Q07889 1333 aaPredicted RBP20.18■□□□□ 0.82
ERCC1-209ENST00000589214 USP42Q9H9J4 1324 aaKnown RBP20.18■□□□□ 0.82
ERCC1-209ENST00000589214 COL15A1P39059 1388 aa20.18■□□□□ 0.82
ERCC1-209ENST00000589214 BTBD11A6QL63 1104 aa20.17■□□□□ 0.82
ERCC1-209ENST00000589214 NLGN1Q8N2Q7 840 aa20.17■□□□□ 0.82
ERCC1-209ENST00000589214 MAPK8IP3Q9UPT6 1336 aa20.17■□□□□ 0.82
ERCC1-209ENST00000589214 KCNQ3O43525 872 aa20.16■□□□□ 0.82
ERCC1-209ENST00000589214 PLEKHF1Q96S99 279 aa20.16■□□□□ 0.82
ERCC1-209ENST00000589214 KIF13BQ9NQT8 1826 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms