RNA–Protein interactions for RNA: ENST00000589165.5

ERCC1-208, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene ERCC1, Length 1,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-208ENST00000589165 SGIP1Q9BQI5 828 aa18.55■□□□□ 0.56
ERCC1-208ENST00000589165 SLC52A2Q9HAB3 445 aa18.55■□□□□ 0.56
ERCC1-208ENST00000589165 LGR6Q9HBX8 967 aa18.55■□□□□ 0.56
ERCC1-208ENST00000589165 ATF5Q9Y2D1 282 aaPredicted RBP18.55■□□□□ 0.56
ERCC1-208ENST00000589165 PRKAR2BP31323 418 aa18.54■□□□□ 0.56
ERCC1-208ENST00000589165 ATP6V1AP38606 617 aa18.54■□□□□ 0.56
ERCC1-208ENST00000589165 ITPK1Q13572 414 aa18.53■□□□□ 0.56
ERCC1-208ENST00000589165 FLAD1Q8NFF5 587 aa18.53■□□□□ 0.56
ERCC1-208ENST00000589165 PHACTR3Q96KR7 559 aa18.53■□□□□ 0.56
ERCC1-208ENST00000589165 PPP1R1BQ9UD71 204 aaPredicted RBP18.53■□□□□ 0.56
ERCC1-208ENST00000589165 QSER1Q2KHR3 1735 aa18.53■□□□□ 0.56
ERCC1-208ENST00000589165 LINC00116Q8NCU8 138 aa18.52■□□□□ 0.56
ERCC1-208ENST00000589165 SLC4A9Q96Q91 983 aa18.52■□□□□ 0.56
ERCC1-208ENST00000589165 MRC1P22897 1456 aa18.52■□□□□ 0.56
ERCC1-208ENST00000589165 C5P01031 1676 aa18.52■□□□□ 0.56
ERCC1-208ENST00000589165 GNAT3A8MTJ3 354 aa18.52■□□□□ 0.55
ERCC1-208ENST00000589165 COL23A1Q86Y22 540 aaPredicted RBP18.52■□□□□ 0.55
ERCC1-208ENST00000589165 AK7Q96M32 723 aa18.52■□□□□ 0.55
ERCC1-208ENST00000589165 MAP3K5Q99683 1374 aa18.52■□□□□ 0.55
ERCC1-208ENST00000589165 RBM42Q9BTD8 480 aaKnown RBP18.51■□□□□ 0.55
ERCC1-208ENST00000589165 ADAMTS7Q9UKP4 1686 aa18.5■□□□□ 0.55
ERCC1-208ENST00000589165 C4BP0C0L5 1744 aa18.5■□□□□ 0.55
ERCC1-208ENST00000589165 SCN11AQ9UI33 1791 aa18.49■□□□□ 0.55
ERCC1-208ENST00000589165 SSFA2P28290 1259 aa18.49■□□□□ 0.55
ERCC1-208ENST00000589165 IL17REQ8NFR9 667 aa18.49■□□□□ 0.55
ERCC1-208ENST00000589165 ZNF831Q5JPB2 1677 aa18.49■□□□□ 0.55
ERCC1-208ENST00000589165 VIRMAQ69YN4 1812 aaKnown RBP18.49■□□□□ 0.55
ERCC1-208ENST00000589165 TAF1LQ8IZX4 1826 aa18.49■□□□□ 0.55
ERCC1-208ENST00000589165 MYBBP1AQ9BQG0 1328 aaKnown RBP18.48■□□□□ 0.55
ERCC1-208ENST00000589165 PTCD1O75127 700 aaKnown RBP18.48■□□□□ 0.55
ERCC1-208ENST00000589165 MSH5O43196 834 aa18.47■□□□□ 0.55
ERCC1-208ENST00000589165 RC3H1Q5TC82 1133 aaKnown RBP18.47■□□□□ 0.55
ERCC1-208ENST00000589165 AMIGO3Q86WK7 504 aa18.47■□□□□ 0.55
ERCC1-208ENST00000589165 CEMIPQ8WUJ3 1361 aa18.47■□□□□ 0.55
ERCC1-208ENST00000589165 TUBGCP6Q96RT7 1819 aa18.47■□□□□ 0.55
ERCC1-208ENST00000589165 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.46■□□□□ 0.55
ERCC1-208ENST00000589165 POLD1P28340 1107 aa18.46■□□□□ 0.55
ERCC1-208ENST00000589165 ARXQ96QS3 562 aa18.46■□□□□ 0.55
ERCC1-208ENST00000589165 CNTNAP4Q9C0A0 1308 aa18.46■□□□□ 0.55
ERCC1-208ENST00000589165 GNPATO15228 680 aa18.46■□□□□ 0.54
ERCC1-208ENST00000589165 TEFQ10587 303 aa18.45■□□□□ 0.54
ERCC1-208ENST00000589165 SLC39A6Q13433 755 aa18.45■□□□□ 0.54
ERCC1-208ENST00000589165 HTATSF1O43719 755 aaKnown RBP18.44■□□□□ 0.54
ERCC1-208ENST00000589165 PLEKHF1Q96S99 279 aa18.44■□□□□ 0.54
ERCC1-208ENST00000589165 PNNQ9H307 717 aaKnown RBP18.44■□□□□ 0.54
ERCC1-208ENST00000589165 PRKRIP1Q9H875 184 aaPredicted RBP18.44■□□□□ 0.54
ERCC1-208ENST00000589165 PHF14O94880 888 aa18.43■□□□□ 0.54
ERCC1-208ENST00000589165 VSIG10Q8N0Z9 540 aa18.43■□□□□ 0.54
ERCC1-208ENST00000589165 FHDC1Q9C0D6 1143 aaPredicted RBP18.43■□□□□ 0.54
ERCC1-208ENST00000589165 RTCBQ9Y3I0 505 aaKnown RBP18.43■□□□□ 0.54
ERCC1-208ENST00000589165 COL24A1Q17RW2 1714 aa18.43■□□□□ 0.54
ERCC1-208ENST00000589165 NEFMP07197 916 aa18.42■□□□□ 0.54
ERCC1-208ENST00000589165 ADRA2BP18089 450 aa18.42■□□□□ 0.54
ERCC1-208ENST00000589165 RTF1Q92541 710 aaKnown RBP18.42■□□□□ 0.54
ERCC1-208ENST00000589165 RPS6KA4O75676 772 aa18.41■□□□□ 0.54
ERCC1-208ENST00000589165 SMIM5Q71RC9 77 aa18.41■□□□□ 0.54
ERCC1-208ENST00000589165 SYT17Q9BSW7 474 aa18.41■□□□□ 0.54
ERCC1-208ENST00000589165 UBR3Q6ZT12 1888 aa18.41■□□□□ 0.54
ERCC1-208ENST00000589165 KCPQ6ZWJ8 1503 aa18.41■□□□□ 0.54
ERCC1-208ENST00000589165 CICQ96RK0 1608 aaPredicted RBP18.41■□□□□ 0.54
ERCC1-208ENST00000589165 CRKLP46109 303 aaKnown RBP18.4■□□□□ 0.54
ERCC1-208ENST00000589165 TRAPPC3LQ5T215 181 aa18.4■□□□□ 0.54
ERCC1-208ENST00000589165 ZNF790Q6PG37 636 aa18.4■□□□□ 0.54
ERCC1-208ENST00000589165 TTC5Q8N0Z6 440 aa18.4■□□□□ 0.54
ERCC1-208ENST00000589165 ZNF316A6NFI3 1004 aaPredicted RBP18.39■□□□□ 0.54
ERCC1-208ENST00000589165 MSL1Q68DK7 614 aa18.39■□□□□ 0.54
ERCC1-208ENST00000589165 DNAJC10Q8IXB1 793 aa18.39■□□□□ 0.54
ERCC1-208ENST00000589165 COL5A3P25940 1745 aaPredicted RBP18.39■□□□□ 0.53
ERCC1-208ENST00000589165 MCM10Q7L590 875 aa18.39■□□□□ 0.53
ERCC1-208ENST00000589165 CYP19A1P11511 503 aaPredicted RBP18.38■□□□□ 0.53
ERCC1-208ENST00000589165 NFE2L2Q16236 605 aa18.38■□□□□ 0.53
ERCC1-208ENST00000589165 INTS5Q6P9B9 1019 aaKnown RBP18.38■□□□□ 0.53
ERCC1-208ENST00000589165 ARHGEF1Q92888 912 aaKnown RBP18.38■□□□□ 0.53
ERCC1-208ENST00000589165 BTBD11A6QL63 1104 aa18.37■□□□□ 0.53
ERCC1-208ENST00000589165 ZNF496Q96IT1 587 aaPredicted RBP18.37■□□□□ 0.53
ERCC1-208ENST00000589165 CCDC87Q9NVE4 849 aa18.37■□□□□ 0.53
ERCC1-208ENST00000589165 MAPK8IP3Q9UPT6 1336 aa18.37■□□□□ 0.53
ERCC1-208ENST00000589165 TJP1Q07157 1748 aa18.36■□□□□ 0.53
ERCC1-208ENST00000589165 RFC4P35249 363 aa18.35■□□□□ 0.53
ERCC1-208ENST00000589165 DCTN1Q14203 1278 aa18.35■□□□□ 0.53
ERCC1-208ENST00000589165 TEX13AQ9BXU3 409 aaPredicted RBP18.35■□□□□ 0.53
ERCC1-208ENST00000589165 HEG1Q9ULI3 1381 aa18.35■□□□□ 0.53
ERCC1-208ENST00000589165 STARD3NLO95772 234 aa18.34■□□□□ 0.53
ERCC1-208ENST00000589165 NLGN1Q8N2Q7 840 aa18.34■□□□□ 0.53
ERCC1-208ENST00000589165 FMNL2Q96PY5 1086 aa18.34■□□□□ 0.53
ERCC1-208ENST00000589165 UBR2Q8IWV8 1755 aa18.34■□□□□ 0.53
ERCC1-208ENST00000589165 SIPA1L3O60292 1781 aaPredicted RBP18.34■□□□□ 0.53
ERCC1-208ENST00000589165 DCAF8L1A6NGE4 600 aa18.33■□□□□ 0.53
ERCC1-208ENST00000589165 MYH14Q7Z406 1995 aaKnown RBP18.33■□□□□ 0.53
ERCC1-208ENST00000589165 KCNQ3O43525 872 aa18.33■□□□□ 0.52
ERCC1-208ENST00000589165 WDR43Q15061 677 aaKnown RBP eCLIP18.33■□□□□ 0.52
ERCC1-208ENST00000589165 TAF7Q15545 349 aaPredicted RBP18.33■□□□□ 0.52
ERCC1-208ENST00000589165 SOS1Q07889 1333 aaPredicted RBP18.32■□□□□ 0.52
ERCC1-208ENST00000589165 GYS1P13807 737 aa18.32■□□□□ 0.52
ERCC1-208ENST00000589165 CD2APQ9Y5K6 639 aa18.32■□□□□ 0.52
ERCC1-208ENST00000589165 DLG5Q8TDM6 1919 aa18.31■□□□□ 0.52
ERCC1-208ENST00000589165 ZBTB1Q9Y2K1 713 aa18.31■□□□□ 0.52
ERCC1-208ENST00000589165 USP42Q9H9J4 1324 aaKnown RBP18.31■□□□□ 0.52
ERCC1-208ENST00000589165 MMP10P09238 476 aa18.3■□□□□ 0.52
ERCC1-208ENST00000589165 KLHL34Q8N239 644 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms