RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 DCAF5Q96JK2 942 aa15.59■□□□□ 0.09
RFX1-204ENST00000588885 ATG3Q9NT62 314 aa15.59■□□□□ 0.09
RFX1-204ENST00000588885 LOC102724428A0A0B4J2F2 783 aa15.58■□□□□ 0.08
RFX1-204ENST00000588885 ERVV-2B6SEH9 535 aa15.58■□□□□ 0.08
RFX1-204ENST00000588885 U2SURPO15042 1029 aaKnown RBP15.58■□□□□ 0.08
RFX1-204ENST00000588885 HSP90AB1P08238 724 aaKnown RBP15.58■□□□□ 0.08
RFX1-204ENST00000588885 SIK1P57059 783 aa15.58■□□□□ 0.08
RFX1-204ENST00000588885 ARXQ96QS3 562 aa15.58■□□□□ 0.08
RFX1-204ENST00000588885 SGIP1Q9BQI5 828 aa15.58■□□□□ 0.08
RFX1-204ENST00000588885 FHDC1Q9C0D6 1143 aaPredicted RBP15.58■□□□□ 0.08
RFX1-204ENST00000588885 POLD1P28340 1107 aa15.57■□□□□ 0.08
RFX1-204ENST00000588885 ATP6V1AP38606 617 aa15.57■□□□□ 0.08
RFX1-204ENST00000588885 MSL1Q68DK7 614 aa15.57■□□□□ 0.08
RFX1-204ENST00000588885 AK7Q96M32 723 aa15.57■□□□□ 0.08
RFX1-204ENST00000588885 RBM42Q9BTD8 480 aaKnown RBP15.57■□□□□ 0.08
RFX1-204ENST00000588885 NPC1L1Q9UHC9 1359 aa15.57■□□□□ 0.08
RFX1-204ENST00000588885 C5P01031 1676 aa15.57■□□□□ 0.08
RFX1-204ENST00000588885 PKD1L3Q7Z443 1732 aa15.57■□□□□ 0.08
RFX1-204ENST00000588885 PHF14O94880 888 aa15.56■□□□□ 0.08
RFX1-204ENST00000588885 ITPK1Q13572 414 aa15.56■□□□□ 0.08
RFX1-204ENST00000588885 AMIGO3Q86WK7 504 aa15.56■□□□□ 0.08
RFX1-204ENST00000588885 NFATC2IPQ8NCF5 419 aa15.56■□□□□ 0.08
RFX1-204ENST00000588885 LINC00116Q8NCU8 138 aa15.56■□□□□ 0.08
RFX1-204ENST00000588885 SLC16A10Q8TF71 515 aa15.56■□□□□ 0.08
RFX1-204ENST00000588885 TAF1LQ8IZX4 1826 aa15.56■□□□□ 0.08
RFX1-204ENST00000588885 KDRP35968 1356 aa15.55■□□□□ 0.08
RFX1-204ENST00000588885 SYT17Q9BSW7 474 aa15.55■□□□□ 0.08
RFX1-204ENST00000588885 TOGARAM1Q9Y4F4 1720 aa15.54■□□□□ 0.08
RFX1-204ENST00000588885 KDM6AO15550 1401 aaPredicted RBP15.54■□□□□ 0.08
RFX1-204ENST00000588885 MTHFSDQ2M296 383 aaKnown RBP15.54■□□□□ 0.08
RFX1-204ENST00000588885 LGR6Q9HBX8 967 aa15.54■□□□□ 0.08
RFX1-204ENST00000588885 PTCD1O75127 700 aaKnown RBP15.53■□□□□ 0.08
RFX1-204ENST00000588885 PPP2R1AP30153 589 aa15.53■□□□□ 0.08
RFX1-204ENST00000588885 AKAP4Q5JQC9 854 aa15.53■□□□□ 0.08
RFX1-204ENST00000588885 PELP1Q8IZL8 1130 aaKnown RBP15.53■□□□□ 0.08
RFX1-204ENST00000588885 SLC4A9Q96Q91 983 aa15.53■□□□□ 0.08
RFX1-204ENST00000588885 PLEKHG2Q9H7P9 1386 aa15.52■□□□□ 0.08
RFX1-204ENST00000588885 CFAP53Q96M91 514 aa15.52■□□□□ 0.08
RFX1-204ENST00000588885 UTRNP46939 3433 aa15.51■□□□□ 0.07
RFX1-204ENST00000588885 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.51■□□□□ 0.07
RFX1-204ENST00000588885 GNPATO15228 680 aa15.51■□□□□ 0.07
RFX1-204ENST00000588885 ABCB7O75027 752 aa15.51■□□□□ 0.07
RFX1-204ENST00000588885 HMGB2P26583 209 aaKnown RBP15.51■□□□□ 0.07
RFX1-204ENST00000588885 FLAD1Q8NFF5 587 aa15.51■□□□□ 0.07
RFX1-204ENST00000588885 RNMTO43148 476 aaKnown RBP15.5■□□□□ 0.07
RFX1-204ENST00000588885 GPR162Q16538 588 aa15.5■□□□□ 0.07
RFX1-204ENST00000588885 GOLGB1Q14789 3259 aaKnown RBP15.49■□□□□ 0.07
RFX1-204ENST00000588885 COL24A1Q17RW2 1714 aa15.48■□□□□ 0.07
RFX1-204ENST00000588885 U2AF1L5P0DN76 240 aaPredicted RBP15.48■□□□□ 0.07
RFX1-204ENST00000588885 U2AF1Q01081 240 aaKnown RBP eCLIP15.48■□□□□ 0.07
RFX1-204ENST00000588885 SLC39A6Q13433 755 aa15.48■□□□□ 0.07
RFX1-204ENST00000588885 SLC52A2Q9HAB3 445 aa15.48■□□□□ 0.07
RFX1-204ENST00000588885 COL3A1P02461 1466 aaPredicted RBP15.47■□□□□ 0.07
RFX1-204ENST00000588885 C4BP0C0L5 1744 aa15.47■□□□□ 0.07
RFX1-204ENST00000588885 PRKAR2BP31323 418 aa15.47■□□□□ 0.07
RFX1-204ENST00000588885 PHACTR3Q96KR7 559 aa15.47■□□□□ 0.07
RFX1-204ENST00000588885 NUDCQ9Y266 331 aa15.47■□□□□ 0.07
RFX1-204ENST00000588885 SSFA2P28290 1259 aa15.46■□□□□ 0.07
RFX1-204ENST00000588885 DDX10Q13206 875 aaKnown RBP15.46■□□□□ 0.07
RFX1-204ENST00000588885 NLGN2Q8NFZ4 835 aa15.46■□□□□ 0.07
RFX1-204ENST00000588885 TRAPPC3LQ5T215 181 aa15.45■□□□□ 0.06
RFX1-204ENST00000588885 RTCBQ9Y3I0 505 aaKnown RBP15.45■□□□□ 0.06
RFX1-204ENST00000588885 UBR3Q6ZT12 1888 aa15.45■□□□□ 0.06
RFX1-204ENST00000588885 MAP3K5Q99683 1374 aa15.45■□□□□ 0.06
RFX1-204ENST00000588885 GNAT3A8MTJ3 354 aa15.44■□□□□ 0.06
RFX1-204ENST00000588885 IL17REQ8NFR9 667 aa15.44■□□□□ 0.06
RFX1-204ENST00000588885 GAS2L2Q8NHY3 880 aa15.44■□□□□ 0.06
RFX1-204ENST00000588885 RSPH6AQ9H0K4 717 aa15.44■□□□□ 0.06
RFX1-204ENST00000588885 CRKLP46109 303 aaKnown RBP15.43■□□□□ 0.06
RFX1-204ENST00000588885 RC3H1Q5TC82 1133 aaKnown RBP15.43■□□□□ 0.06
RFX1-204ENST00000588885 DNAJC10Q8IXB1 793 aa15.43■□□□□ 0.06
RFX1-204ENST00000588885 ARHGEF1Q92888 912 aaKnown RBP15.43■□□□□ 0.06
RFX1-204ENST00000588885 RPS6KA4O75676 772 aa15.42■□□□□ 0.06
RFX1-204ENST00000588885 RFC4P35249 363 aa15.41■□□□□ 0.06
RFX1-204ENST00000588885 TEFQ10587 303 aa15.41■□□□□ 0.06
RFX1-204ENST00000588885 CNTNAP4Q9C0A0 1308 aa15.41■□□□□ 0.06
RFX1-204ENST00000588885 VIRMAQ69YN4 1812 aaKnown RBP15.4■□□□□ 0.06
RFX1-204ENST00000588885 FCHSD2O94868 740 aa15.4■□□□□ 0.06
RFX1-204ENST00000588885 INTS5Q6P9B9 1019 aaKnown RBP15.4■□□□□ 0.06
RFX1-204ENST00000588885 MMP10P09238 476 aa15.39■□□□□ 0.05
RFX1-204ENST00000588885 DIEXFQ68CQ4 756 aaKnown RBP15.39■□□□□ 0.05
RFX1-204ENST00000588885 CHRDL2Q6WN34 429 aa15.39■□□□□ 0.05
RFX1-204ENST00000588885 TTC5Q8N0Z6 440 aa15.39■□□□□ 0.05
RFX1-204ENST00000588885 ZNF784Q8NCA9 323 aaPredicted RBP15.39■□□□□ 0.05
RFX1-204ENST00000588885 SRP68Q9UHB9 627 aaKnown RBP15.39■□□□□ 0.05
RFX1-204ENST00000588885 WWC3Q9ULE0 1092 aa15.39■□□□□ 0.05
RFX1-204ENST00000588885 MCM10Q7L590 875 aa15.38■□□□□ 0.05
RFX1-204ENST00000588885 ZNF219Q9P2Y4 722 aaPredicted RBP15.38■□□□□ 0.05
RFX1-204ENST00000588885 KCNQ3O43525 872 aa15.37■□□□□ 0.05
RFX1-204ENST00000588885 CYP19A1P11511 503 aaPredicted RBP15.37■□□□□ 0.05
RFX1-204ENST00000588885 DCTN1Q14203 1278 aa15.37■□□□□ 0.05
RFX1-204ENST00000588885 NLGN1Q8N2Q7 840 aa15.37■□□□□ 0.05
RFX1-204ENST00000588885 RTF1Q92541 710 aaKnown RBP15.37■□□□□ 0.05
RFX1-204ENST00000588885 CCDC87Q9NVE4 849 aa15.37■□□□□ 0.05
RFX1-204ENST00000588885 CD2APQ9Y5K6 639 aa15.37■□□□□ 0.05
RFX1-204ENST00000588885 GYS1P13807 737 aa15.36■□□□□ 0.05
RFX1-204ENST00000588885 YBX3P16989 372 aaKnown RBP eCLIP15.36■□□□□ 0.05
RFX1-204ENST00000588885 ZNF496Q96IT1 587 aaPredicted RBP15.36■□□□□ 0.05
RFX1-204ENST00000588885 BTBD11A6QL63 1104 aa15.35■□□□□ 0.05
RFX1-204ENST00000588885 GRIN3BO60391 1043 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms