RNA–Protein interactions for RNA: ENST00000588839.1

NFIC-205, Transcript of nuclear factor I C, humanhuman

TSL 3

Gene NFIC, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIC-205ENST00000588839 C1orf141Q5JVX7 400 aa20.03■□□□□ 0.8
NFIC-205ENST00000588839 ASAP1Q9ULH1 1129 aa20.03■□□□□ 0.8
NFIC-205ENST00000588839 ATP6V1AP38606 617 aa20.02■□□□□ 0.8
NFIC-205ENST00000588839 MSL1Q68DK7 614 aa20.02■□□□□ 0.8
NFIC-205ENST00000588839 SULT6B1Q6IMI4 303 aa20.02■□□□□ 0.8
NFIC-205ENST00000588839 KDRP35968 1356 aa20.01■□□□□ 0.79
NFIC-205ENST00000588839 SSFA2P28290 1259 aa20.01■□□□□ 0.79
NFIC-205ENST00000588839 GPR162Q16538 588 aa20.01■□□□□ 0.79
NFIC-205ENST00000588839 ATG3Q9NT62 314 aa20.01■□□□□ 0.79
NFIC-205ENST00000588839 PHF14O94880 888 aa20■□□□□ 0.79
NFIC-205ENST00000588839 IL13P35225 146 aa20■□□□□ 0.79
NFIC-205ENST00000588839 AEBP1Q8IUX7 1158 aa20■□□□□ 0.79
NFIC-205ENST00000588839 SCN11AQ9UI33 1791 aa20■□□□□ 0.79
NFIC-205ENST00000588839 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.99■□□□□ 0.79
NFIC-205ENST00000588839 HOXD11P31277 338 aaPredicted RBP19.99■□□□□ 0.79
NFIC-205ENST00000588839 MTHFSP49914 203 aa19.99■□□□□ 0.79
NFIC-205ENST00000588839 CABP4P57796 275 aa19.99■□□□□ 0.79
NFIC-205ENST00000588839 LINC00116Q8NCU8 138 aa19.99■□□□□ 0.79
NFIC-205ENST00000588839 VIRMAQ69YN4 1812 aaKnown RBP19.99■□□□□ 0.79
NFIC-205ENST00000588839 PELP1Q8IZL8 1130 aaKnown RBP19.98■□□□□ 0.79
NFIC-205ENST00000588839 KDM6AO15550 1401 aaPredicted RBP19.98■□□□□ 0.79
NFIC-205ENST00000588839 COL5A3P25940 1745 aaPredicted RBP19.98■□□□□ 0.79
NFIC-205ENST00000588839 GNPATO15228 680 aa19.97■□□□□ 0.79
NFIC-205ENST00000588839 PER1O15534 1290 aaPredicted RBP19.97■□□□□ 0.79
NFIC-205ENST00000588839 ITPK1Q13572 414 aa19.97■□□□□ 0.79
NFIC-205ENST00000588839 CC2D1BQ5T0F9 858 aaKnown RBP19.97■□□□□ 0.79
NFIC-205ENST00000588839 RNF216Q9NWF9 866 aaPredicted RBP19.97■□□□□ 0.79
NFIC-205ENST00000588839 NPC1L1Q9UHC9 1359 aa19.96■□□□□ 0.79
NFIC-205ENST00000588839 NLGN2Q8NFZ4 835 aa19.96■□□□□ 0.79
NFIC-205ENST00000588839 RBM42Q9BTD8 480 aaKnown RBP19.96■□□□□ 0.79
NFIC-205ENST00000588839 CD2APQ9Y5K6 639 aa19.95■□□□□ 0.78
NFIC-205ENST00000588839 AMIGO3Q86WK7 504 aa19.94■□□□□ 0.78
NFIC-205ENST00000588839 DIAPH1O60610 1272 aaKnown RBP19.93■□□□□ 0.78
NFIC-205ENST00000588839 AKAP4Q5JQC9 854 aa19.93■□□□□ 0.78
NFIC-205ENST00000588839 RTCBQ9Y3I0 505 aaKnown RBP19.93■□□□□ 0.78
NFIC-205ENST00000588839 GRIN3BO60391 1043 aa19.91■□□□□ 0.78
NFIC-205ENST00000588839 RC3H1Q5TC82 1133 aaKnown RBP19.91■□□□□ 0.78
NFIC-205ENST00000588839 NFATC2IPQ8NCF5 419 aa19.91■□□□□ 0.78
NFIC-205ENST00000588839 CNTNAP4Q9C0A0 1308 aa19.91■□□□□ 0.78
NFIC-205ENST00000588839 CICQ96RK0 1608 aaPredicted RBP19.91■□□□□ 0.78
NFIC-205ENST00000588839 HMOX1P09601 288 aa19.9■□□□□ 0.78
NFIC-205ENST00000588839 TRAPPC3LQ5T215 181 aa19.9■□□□□ 0.78
NFIC-205ENST00000588839 MYH14Q7Z406 1995 aaKnown RBP19.9■□□□□ 0.78
NFIC-205ENST00000588839 SMIM5Q71RC9 77 aa19.89■□□□□ 0.77
NFIC-205ENST00000588839 ZNF784Q8NCA9 323 aaPredicted RBP19.89■□□□□ 0.77
NFIC-205ENST00000588839 SLC4A9Q96Q91 983 aa19.89■□□□□ 0.77
NFIC-205ENST00000588839 PTCD1O75127 700 aaKnown RBP19.88■□□□□ 0.77
NFIC-205ENST00000588839 KCNA4P22459 653 aa19.88■□□□□ 0.77
NFIC-205ENST00000588839 C4AP0C0L4 1744 aa19.88■□□□□ 0.77
NFIC-205ENST00000588839 TJP1Q07157 1748 aa19.88■□□□□ 0.77
NFIC-205ENST00000588839 MRC1P22897 1456 aa19.87■□□□□ 0.77
NFIC-205ENST00000588839 CNGB1Q14028 1251 aaPredicted RBP19.87■□□□□ 0.77
NFIC-205ENST00000588839 SLC52A2Q9HAB3 445 aa19.87■□□□□ 0.77
NFIC-205ENST00000588839 RPS6KA4O75676 772 aa19.86■□□□□ 0.77
NFIC-205ENST00000588839 RFC4P35249 363 aa19.86■□□□□ 0.77
NFIC-205ENST00000588839 NLGN1Q8N2Q7 840 aa19.86■□□□□ 0.77
NFIC-205ENST00000588839 COL3A1P02461 1466 aaPredicted RBP19.86■□□□□ 0.77
NFIC-205ENST00000588839 KIF13BQ9NQT8 1826 aa19.86■□□□□ 0.77
NFIC-205ENST00000588839 ADAMTS7Q9UKP4 1686 aa19.85■□□□□ 0.77
NFIC-205ENST00000588839 YBX3P16989 372 aaKnown RBP eCLIP19.85■□□□□ 0.77
NFIC-205ENST00000588839 U2SURPO15042 1029 aaKnown RBP19.84■□□□□ 0.77
NFIC-205ENST00000588839 RNMTO43148 476 aaKnown RBP19.84■□□□□ 0.77
NFIC-205ENST00000588839 MMP10P09238 476 aa19.84■□□□□ 0.77
NFIC-205ENST00000588839 ARHGEF1Q92888 912 aaKnown RBP19.84■□□□□ 0.77
NFIC-205ENST00000588839 CFAP53Q96M91 514 aa19.84■□□□□ 0.77
NFIC-205ENST00000588839 NPM3O75607 178 aaKnown RBP19.83■□□□□ 0.77
NFIC-205ENST00000588839 CRKLP46109 303 aaKnown RBP19.83■□□□□ 0.77
NFIC-205ENST00000588839 MTHFSDQ2M296 383 aaKnown RBP19.83■□□□□ 0.77
NFIC-205ENST00000588839 LGR6Q9HBX8 967 aa19.82■□□□□ 0.76
NFIC-205ENST00000588839 GAS2L2Q8NHY3 880 aa19.81■□□□□ 0.76
NFIC-205ENST00000588839 UBR2Q8IWV8 1755 aa19.8■□□□□ 0.76
NFIC-205ENST00000588839 GYS1P13807 737 aa19.79■□□□□ 0.76
NFIC-205ENST00000588839 NUDCQ9Y266 331 aa19.79■□□□□ 0.76
NFIC-205ENST00000588839 N4BP2Q86UW6 1770 aaPredicted RBP19.78■□□□□ 0.76
NFIC-205ENST00000588839 KCPQ6ZWJ8 1503 aa19.78■□□□□ 0.76
NFIC-205ENST00000588839 CCDC87Q9NVE4 849 aa19.78■□□□□ 0.76
NFIC-205ENST00000588839 PARP3Q9Y6F1 533 aa19.78■□□□□ 0.76
NFIC-205ENST00000588839 GNAT3A8MTJ3 354 aa19.77■□□□□ 0.76
NFIC-205ENST00000588839 TTC5Q8N0Z6 440 aa19.77■□□□□ 0.76
NFIC-205ENST00000588839 SIPA1L3O60292 1781 aaPredicted RBP19.77■□□□□ 0.76
NFIC-205ENST00000588839 USP42Q9H9J4 1324 aaKnown RBP19.76■□□□□ 0.75
NFIC-205ENST00000588839 C10orf71Q711Q0 1435 aa19.76■□□□□ 0.75
NFIC-205ENST00000588839 TGFB2P61812 414 aa19.76■□□□□ 0.75
NFIC-205ENST00000588839 TEFQ10587 303 aa19.76■□□□□ 0.75
NFIC-205ENST00000588839 SLC39A6Q13433 755 aa19.76■□□□□ 0.75
NFIC-205ENST00000588839 DNAJC10Q8IXB1 793 aa19.76■□□□□ 0.75
NFIC-205ENST00000588839 VSIG10Q8N0Z9 540 aa19.76■□□□□ 0.75
NFIC-205ENST00000588839 KIAA1551Q9HCM1 1747 aa19.76■□□□□ 0.75
NFIC-205ENST00000588839 PXDNLA1KZ92 1463 aa19.75■□□□□ 0.75
NFIC-205ENST00000588839 INTS5Q6P9B9 1019 aaKnown RBP19.75■□□□□ 0.75
NFIC-205ENST00000588839 ZPR1O75312 459 aa19.74■□□□□ 0.75
NFIC-205ENST00000588839 BRCA1P38398 1863 aaKnown RBP19.73■□□□□ 0.75
NFIC-205ENST00000588839 GIGYF1O75420 1035 aaPredicted RBP19.73■□□□□ 0.75
NFIC-205ENST00000588839 CYP19A1P11511 503 aaPredicted RBP19.73■□□□□ 0.75
NFIC-205ENST00000588839 WWC3Q9ULE0 1092 aa19.73■□□□□ 0.75
NFIC-205ENST00000588839 PPP2R1AP30153 589 aa19.72■□□□□ 0.75
NFIC-205ENST00000588839 PRKAR2BP31323 418 aa19.72■□□□□ 0.75
NFIC-205ENST00000588839 SRP68Q9UHB9 627 aaKnown RBP19.72■□□□□ 0.75
NFIC-205ENST00000588839 SOS1Q07889 1333 aaPredicted RBP19.72■□□□□ 0.75
NFIC-205ENST00000588839 STARD3NLO95772 234 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms