RNA–Protein interactions for RNA: ENST00000588812.5

CDK3-204, Transcript of cyclin dependent kinase 3, humanhuman

TSL 3

Gene CDK3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-204ENST00000588812 BAG6P46379 1132 aa14.57□□□□□ -0.08
CDK3-204ENST00000588812 CCDC27Q2M243 656 aa14.57□□□□□ -0.08
CDK3-204ENST00000588812 SMARCC1Q92922 1105 aaPredicted RBP14.57□□□□□ -0.08
CDK3-204ENST00000588812 ITGB4P16144 1822 aa14.57□□□□□ -0.08
CDK3-204ENST00000588812 PLSCR1O15162 318 aa14.56□□□□□ -0.08
CDK3-204ENST00000588812 CALD1Q05682 793 aaKnown RBP14.56□□□□□ -0.08
CDK3-204ENST00000588812 TAF7Q15545 349 aaPredicted RBP14.56□□□□□ -0.08
CDK3-204ENST00000588812 THUMPD2Q9BTF0 503 aaKnown RBP14.55□□□□□ -0.08
CDK3-204ENST00000588812 TNS1Q9HBL0 1735 aaKnown RBP14.55□□□□□ -0.08
CDK3-204ENST00000588812 BTAF1O14981 1849 aa14.55□□□□□ -0.08
CDK3-204ENST00000588812 VIRMAQ69YN4 1812 aaKnown RBP14.55□□□□□ -0.08
CDK3-204ENST00000588812 BTBD11A6QL63 1104 aa14.54□□□□□ -0.08
CDK3-204ENST00000588812 WWC1Q8IX03 1113 aa14.54□□□□□ -0.08
CDK3-204ENST00000588812 ATG3Q9NT62 314 aa14.54□□□□□ -0.08
CDK3-204ENST00000588812 ASAP1Q9ULH1 1129 aa14.54□□□□□ -0.08
CDK3-204ENST00000588812 SENP3-EIF4A1A0A087X0R7 540 aa14.53□□□□□ -0.08
CDK3-204ENST00000588812 BABAM1Q9NWV8 329 aa14.53□□□□□ -0.08
CDK3-204ENST00000588812 SALL2Q9Y467 1007 aaPredicted RBP14.53□□□□□ -0.08
CDK3-204ENST00000588812 PALLDQ8WX93 1383 aa14.52□□□□□ -0.08
CDK3-204ENST00000588812 EN1Q05925 392 aaPredicted RBP14.52□□□□□ -0.09
CDK3-204ENST00000588812 ZNF790Q6PG37 636 aa14.52□□□□□ -0.09
CDK3-204ENST00000588812 DEFB132Q7Z7B7 95 aa14.52□□□□□ -0.09
CDK3-204ENST00000588812 TTC5Q8N0Z6 440 aa14.52□□□□□ -0.09
CDK3-204ENST00000588812 CAMKK2Q96RR4 588 aa14.52□□□□□ -0.09
CDK3-204ENST00000588812 HMGB2P26583 209 aaKnown RBP14.51□□□□□ -0.09
CDK3-204ENST00000588812 SLC39A6Q13433 755 aa14.51□□□□□ -0.09
CDK3-204ENST00000588812 SLC27A3Q5K4L6 730 aa14.51□□□□□ -0.09
CDK3-204ENST00000588812 WDR63Q8IWG1 891 aa14.51□□□□□ -0.09
CDK3-204ENST00000588812 SIPA1L3O60292 1781 aaPredicted RBP14.51□□□□□ -0.09
CDK3-204ENST00000588812 IL16Q14005 1332 aa14.5□□□□□ -0.09
CDK3-204ENST00000588812 CHL1O00533 1208 aa14.5□□□□□ -0.09
CDK3-204ENST00000588812 GNAI1P63096 354 aa14.5□□□□□ -0.09
CDK3-204ENST00000588812 TXNRD1Q16881 649 aa14.5□□□□□ -0.09
CDK3-204ENST00000588812 CFAP44Q96MT7 982 aa14.5□□□□□ -0.09
CDK3-204ENST00000588812 IFT57Q9NWB7 429 aa14.5□□□□□ -0.09
CDK3-204ENST00000588812 TSPYL4Q9UJ04 414 aa14.5□□□□□ -0.09
CDK3-204ENST00000588812 RGPD3A6NKT7 1758 aaPredicted RBP14.5□□□□□ -0.09
CDK3-204ENST00000588812 RGPD4Q7Z3J3 1758 aa14.5□□□□□ -0.09
CDK3-204ENST00000588812 LOC102724428A0A0B4J2F2 783 aa14.49□□□□□ -0.09
CDK3-204ENST00000588812 PTCD1O75127 700 aaKnown RBP14.49□□□□□ -0.09
CDK3-204ENST00000588812 SIK1P57059 783 aa14.49□□□□□ -0.09
CDK3-204ENST00000588812 EZH2Q15910 746 aaKnown RBP14.49□□□□□ -0.09
CDK3-204ENST00000588812 RBM42Q9BTD8 480 aaKnown RBP14.49□□□□□ -0.09
CDK3-204ENST00000588812 MIS18AQ9NYP9 233 aa14.49□□□□□ -0.09
CDK3-204ENST00000588812 LAS1LQ9Y4W2 734 aaKnown RBP14.49□□□□□ -0.09
CDK3-204ENST00000588812 ZNF853P0CG23 659 aa14.48□□□□□ -0.09
CDK3-204ENST00000588812 HNRNPUQ00839 825 aaKnown RBP eCLIP14.48□□□□□ -0.09
CDK3-204ENST00000588812 PROM2Q8N271 834 aa14.48□□□□□ -0.09
CDK3-204ENST00000588812 FMNL2Q96PY5 1086 aa14.48□□□□□ -0.09
CDK3-204ENST00000588812 CCNL1Q9UK58 526 aaPredicted RBP14.48□□□□□ -0.09
CDK3-204ENST00000588812 PAPPAQ13219 1627 aa14.48□□□□□ -0.09
CDK3-204ENST00000588812 ZNF521Q96K83 1311 aa14.47□□□□□ -0.09
CDK3-204ENST00000588812 ATP6V1AP38606 617 aa14.47□□□□□ -0.09
CDK3-204ENST00000588812 VSIG10Q8N0Z9 540 aa14.47□□□□□ -0.09
CDK3-204ENST00000588812 LY75O60449 1722 aa14.46□□□□□ -0.09
CDK3-204ENST00000588812 KCNQ3O43525 872 aa14.46□□□□□ -0.09
CDK3-204ENST00000588812 ZNF496Q96IT1 587 aaPredicted RBP14.46□□□□□ -0.09
CDK3-204ENST00000588812 KCPQ6ZWJ8 1503 aa14.46□□□□□ -0.1
CDK3-204ENST00000588812 EIF4A1P60842 406 aaKnown RBP14.45□□□□□ -0.1
CDK3-204ENST00000588812 GOLGA2Q08379 1002 aa14.45□□□□□ -0.1
CDK3-204ENST00000588812 SLC4A9Q96Q91 983 aa14.45□□□□□ -0.1
CDK3-204ENST00000588812 TEX13AQ9BXU3 409 aaPredicted RBP14.45□□□□□ -0.1
CDK3-204ENST00000588812 MBIPQ9NS73 344 aa14.45□□□□□ -0.1
CDK3-204ENST00000588812 LRRC4BQ9NT99 713 aa14.45□□□□□ -0.1
CDK3-204ENST00000588812 HEG1Q9ULI3 1381 aa14.45□□□□□ -0.1
CDK3-204ENST00000588812 UBR2Q8IWV8 1755 aa14.45□□□□□ -0.1
CDK3-204ENST00000588812 MYH16Q9H6N6 1097 aa14.44□□□□□ -0.1
CDK3-204ENST00000588812 ZNF831Q5JPB2 1677 aa14.44□□□□□ -0.1
CDK3-204ENST00000588812 KDM3BQ7LBC6 1761 aa14.44□□□□□ -0.1
CDK3-204ENST00000588812 SNRPA1P09661 255 aaKnown RBP14.43□□□□□ -0.1
CDK3-204ENST00000588812 KCNQ4P56696 695 aa14.43□□□□□ -0.1
CDK3-204ENST00000588812 ITPK1Q13572 414 aa14.43□□□□□ -0.1
CDK3-204ENST00000588812 RREB1Q92766 1687 aa14.42□□□□□ -0.1
CDK3-204ENST00000588812 E9PSI1 815 aa14.42□□□□□ -0.1
CDK3-204ENST00000588812 STARD3NLO95772 234 aa14.42□□□□□ -0.1
CDK3-204ENST00000588812 NBPF14Q5TI25 921 aa14.42□□□□□ -0.1
CDK3-204ENST00000588812 ZBED9Q6R2W3 1325 aa14.41□□□□□ -0.1
CDK3-204ENST00000588812 GIGYF1O75420 1035 aaPredicted RBP14.41□□□□□ -0.1
CDK3-204ENST00000588812 DNAJC10Q8IXB1 793 aa14.41□□□□□ -0.1
CDK3-204ENST00000588812 TSR2Q969E8 191 aaKnown RBP14.41□□□□□ -0.1
CDK3-204ENST00000588812 CICQ96RK0 1608 aaPredicted RBP14.41□□□□□ -0.1
CDK3-204ENST00000588812 RC3H1Q5TC82 1133 aaKnown RBP14.4□□□□□ -0.1
CDK3-204ENST00000588812 LINC00116Q8NCU8 138 aa14.4□□□□□ -0.1
CDK3-204ENST00000588812 SPINK5Q9NQ38 1064 aaPredicted RBP14.4□□□□□ -0.1
CDK3-204ENST00000588812 STK32BQ9NY57 414 aa14.4□□□□□ -0.1
CDK3-204ENST00000588812 FANCIQ9NVI1 1328 aa14.4□□□□□ -0.1
CDK3-204ENST00000588812 NUP188Q5SRE5 1749 aa14.39□□□□□ -0.11
CDK3-204ENST00000588812 HOXB7P09629 217 aa14.39□□□□□ -0.11
CDK3-204ENST00000588812 CYP19A1P11511 503 aaPredicted RBP14.39□□□□□ -0.11
CDK3-204ENST00000588812 SLFN5Q08AF3 891 aa14.39□□□□□ -0.11
CDK3-204ENST00000588812 CHMP4AQ9BY43 222 aa14.39□□□□□ -0.11
CDK3-204ENST00000588812 C5P01031 1676 aa14.39□□□□□ -0.11
CDK3-204ENST00000588812 SOS1Q07889 1333 aaPredicted RBP14.39□□□□□ -0.11
CDK3-204ENST00000588812 CNTNAP4Q9C0A0 1308 aa14.39□□□□□ -0.11
CDK3-204ENST00000588812 CRKLP46109 303 aaKnown RBP14.38□□□□□ -0.11
CDK3-204ENST00000588812 SLC15A2Q16348 729 aa14.38□□□□□ -0.11
CDK3-204ENST00000588812 DUSP27Q5VZP5 1158 aa14.38□□□□□ -0.11
CDK3-204ENST00000588812 AKT1S1Q96B36 256 aa14.38□□□□□ -0.11
CDK3-204ENST00000588812 AK7Q96M32 723 aa14.38□□□□□ -0.11
CDK3-204ENST00000588812 CCDC87Q9NVE4 849 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms