RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 DCTN1Q14203 1278 aa11.85□□□□□ -0.51
CIRBP-218ENST00000588344 PTF1AQ7RTS3 328 aa11.85□□□□□ -0.51
CIRBP-218ENST00000588344 WDR63Q8IWG1 891 aa11.85□□□□□ -0.51
CIRBP-218ENST00000588344 VSIG10Q8N0Z9 540 aa11.85□□□□□ -0.51
CIRBP-218ENST00000588344 ASAP1Q9ULH1 1129 aa11.85□□□□□ -0.51
CIRBP-218ENST00000588344 EN1Q05925 392 aaPredicted RBP11.84□□□□□ -0.51
CIRBP-218ENST00000588344 TXNRD1Q16881 649 aa11.84□□□□□ -0.51
CIRBP-218ENST00000588344 ZNF790Q6PG37 636 aa11.84□□□□□ -0.51
CIRBP-218ENST00000588344 WWC1Q8IX03 1113 aa11.84□□□□□ -0.51
CIRBP-218ENST00000588344 TEX13AQ9BXU3 409 aaPredicted RBP11.84□□□□□ -0.51
CIRBP-218ENST00000588344 PALLDQ8WX93 1383 aa11.83□□□□□ -0.52
CIRBP-218ENST00000588344 LOC102724428A0A0B4J2F2 783 aa11.83□□□□□ -0.52
CIRBP-218ENST00000588344 SIK1P57059 783 aa11.83□□□□□ -0.52
CIRBP-218ENST00000588344 GNAI1P63096 354 aa11.83□□□□□ -0.52
CIRBP-218ENST00000588344 EZH2Q15910 746 aaKnown RBP11.83□□□□□ -0.52
CIRBP-218ENST00000588344 NBPF14Q5TI25 921 aa11.83□□□□□ -0.52
CIRBP-218ENST00000588344 DEFB132Q7Z7B7 95 aa11.83□□□□□ -0.52
CIRBP-218ENST00000588344 CFAP44Q96MT7 982 aa11.83□□□□□ -0.52
CIRBP-218ENST00000588344 FMNL2Q96PY5 1086 aa11.83□□□□□ -0.52
CIRBP-218ENST00000588344 CCNL1Q9UK58 526 aaPredicted RBP11.83□□□□□ -0.52
CIRBP-218ENST00000588344 IL16Q14005 1332 aa11.83□□□□□ -0.52
CIRBP-218ENST00000588344 CHL1O00533 1208 aa11.82□□□□□ -0.52
CIRBP-218ENST00000588344 RBM42Q9BTD8 480 aaKnown RBP11.82□□□□□ -0.52
CIRBP-218ENST00000588344 CHMP4AQ9BY43 222 aa11.82□□□□□ -0.52
CIRBP-218ENST00000588344 IFT57Q9NWB7 429 aa11.82□□□□□ -0.52
CIRBP-218ENST00000588344 TSPYL4Q9UJ04 414 aa11.82□□□□□ -0.52
CIRBP-218ENST00000588344 SHANK3Q9BYB0 1731 aa11.82□□□□□ -0.52
CIRBP-218ENST00000588344 MRC1P22897 1456 aa11.82□□□□□ -0.52
CIRBP-218ENST00000588344 PTCD1O75127 700 aaKnown RBP11.81□□□□□ -0.52
CIRBP-218ENST00000588344 ATP6V1AP38606 617 aa11.81□□□□□ -0.52
CIRBP-218ENST00000588344 PROM2Q8N271 834 aa11.81□□□□□ -0.52
CIRBP-218ENST00000588344 THUMPD2Q9BTF0 503 aaKnown RBP11.81□□□□□ -0.52
CIRBP-218ENST00000588344 NHSQ6T4R5 1651 aa11.81□□□□□ -0.52
CIRBP-218ENST00000588344 ZNF853P0CG23 659 aa11.8□□□□□ -0.52
CIRBP-218ENST00000588344 SLC39A6Q13433 755 aa11.8□□□□□ -0.52
CIRBP-218ENST00000588344 LAS1LQ9Y4W2 734 aaKnown RBP11.8□□□□□ -0.52
CIRBP-218ENST00000588344 ADAMTS7Q9UKP4 1686 aa11.79□□□□□ -0.52
CIRBP-218ENST00000588344 STARD3NLO95772 234 aa11.79□□□□□ -0.52
CIRBP-218ENST00000588344 SNRPA1P09661 255 aaKnown RBP11.79□□□□□ -0.52
CIRBP-218ENST00000588344 SALL2Q9Y467 1007 aaPredicted RBP11.79□□□□□ -0.52
CIRBP-218ENST00000588344 EIF4A1P60842 406 aaKnown RBP11.78□□□□□ -0.52
CIRBP-218ENST00000588344 RC3H1Q5TC82 1133 aaKnown RBP11.78□□□□□ -0.52
CIRBP-218ENST00000588344 ZNF496Q96IT1 587 aaPredicted RBP11.78□□□□□ -0.52
CIRBP-218ENST00000588344 MYH16Q9H6N6 1097 aa11.78□□□□□ -0.52
CIRBP-218ENST00000588344 LRRC4BQ9NT99 713 aa11.78□□□□□ -0.52
CIRBP-218ENST00000588344 MIS18AQ9NYP9 233 aa11.78□□□□□ -0.52
CIRBP-218ENST00000588344 GOLGA2Q08379 1002 aa11.77□□□□□ -0.53
CIRBP-218ENST00000588344 STK32BQ9NY57 414 aa11.77□□□□□ -0.53
CIRBP-218ENST00000588344 SOS1Q07889 1333 aaPredicted RBP11.77□□□□□ -0.53
CIRBP-218ENST00000588344 HEG1Q9ULI3 1381 aa11.77□□□□□ -0.53
CIRBP-218ENST00000588344 DOT1LQ8TEK3 1739 aa11.77□□□□□ -0.53
CIRBP-218ENST00000588344 E9PSI1 815 aa11.76□□□□□ -0.53
CIRBP-218ENST00000588344 GIGYF1O75420 1035 aaPredicted RBP11.76□□□□□ -0.53
CIRBP-218ENST00000588344 HOXB7P09629 217 aa11.76□□□□□ -0.53
CIRBP-218ENST00000588344 HNRNPUQ00839 825 aaKnown RBP eCLIP11.76□□□□□ -0.53
CIRBP-218ENST00000588344 SLC15A2Q16348 729 aa11.76□□□□□ -0.53
CIRBP-218ENST00000588344 FLAD1Q8NFF5 587 aa11.76□□□□□ -0.53
CIRBP-218ENST00000588344 ZNF521Q96K83 1311 aa11.76□□□□□ -0.53
CIRBP-218ENST00000588344 SCN11AQ9UI33 1791 aa11.75□□□□□ -0.53
CIRBP-218ENST00000588344 SBF2Q86WG5 1849 aa11.75□□□□□ -0.53
CIRBP-218ENST00000588344 KCNQ3O43525 872 aa11.75□□□□□ -0.53
CIRBP-218ENST00000588344 CYP19A1P11511 503 aaPredicted RBP11.75□□□□□ -0.53
CIRBP-218ENST00000588344 ITPK1Q13572 414 aa11.75□□□□□ -0.53
CIRBP-218ENST00000588344 AK7Q96M32 723 aa11.75□□□□□ -0.53
CIRBP-218ENST00000588344 SLC4A9Q96Q91 983 aa11.75□□□□□ -0.53
CIRBP-218ENST00000588344 MBIPQ9NS73 344 aa11.75□□□□□ -0.53
CIRBP-218ENST00000588344 TFCP2L1Q9NZI6 479 aa11.75□□□□□ -0.53
CIRBP-218ENST00000588344 CNTNAP4Q9C0A0 1308 aa11.75□□□□□ -0.53
CIRBP-218ENST00000588344 TOGARAM1Q9Y4F4 1720 aa11.74□□□□□ -0.53
CIRBP-218ENST00000588344 NPM2Q86SE8 214 aaKnown RBP11.74□□□□□ -0.53
CIRBP-218ENST00000588344 DNAJC10Q8IXB1 793 aa11.74□□□□□ -0.53
CIRBP-218ENST00000588344 AKT1S1Q96B36 256 aa11.74□□□□□ -0.53
CIRBP-218ENST00000588344 TNS1Q9HBL0 1735 aaKnown RBP11.74□□□□□ -0.53
CIRBP-218ENST00000588344 BTAF1O14981 1849 aa11.73□□□□□ -0.53
CIRBP-218ENST00000588344 RPS6KA4O75676 772 aa11.73□□□□□ -0.53
CIRBP-218ENST00000588344 ADRA2BP18089 450 aa11.73□□□□□ -0.53
CIRBP-218ENST00000588344 KCNQ4P56696 695 aa11.73□□□□□ -0.53
CIRBP-218ENST00000588344 LINC00116Q8NCU8 138 aa11.73□□□□□ -0.53
CIRBP-218ENST00000588344 CCDC87Q9NVE4 849 aa11.73□□□□□ -0.53
CIRBP-218ENST00000588344 RTCBQ9Y3I0 505 aaKnown RBP11.73□□□□□ -0.53
CIRBP-218ENST00000588344 RGPD3A6NKT7 1758 aaPredicted RBP11.72□□□□□ -0.53
CIRBP-218ENST00000588344 RGPD4Q7Z3J3 1758 aa11.72□□□□□ -0.53
CIRBP-218ENST00000588344 ERBB4Q15303 1308 aa11.72□□□□□ -0.53
CIRBP-218ENST00000588344 ZBED9Q6R2W3 1325 aa11.72□□□□□ -0.53
CIRBP-218ENST00000588344 SENP3-EIF4A1A0A087X0R7 540 aa11.72□□□□□ -0.53
CIRBP-218ENST00000588344 SSFA2P28290 1259 aa11.72□□□□□ -0.53
CIRBP-218ENST00000588344 CRKLP46109 303 aaKnown RBP11.72□□□□□ -0.53
CIRBP-218ENST00000588344 SLFN5Q08AF3 891 aa11.72□□□□□ -0.53
CIRBP-218ENST00000588344 TRAPPC3LQ5T215 181 aa11.72□□□□□ -0.53
CIRBP-218ENST00000588344 USP16Q9Y5T5 823 aa11.72□□□□□ -0.53
CIRBP-218ENST00000588344 KCPQ6ZWJ8 1503 aa11.71□□□□□ -0.53
CIRBP-218ENST00000588344 A0A087WZG4 1122 aa11.71□□□□□ -0.53
CIRBP-218ENST00000588344 GNPATO15228 680 aa11.71□□□□□ -0.53
CIRBP-218ENST00000588344 DUSP27Q5VZP5 1158 aa11.71□□□□□ -0.53
CIRBP-218ENST00000588344 INTS5Q6P9B9 1019 aaKnown RBP11.71□□□□□ -0.53
CIRBP-218ENST00000588344 SLC16A10Q8TF71 515 aa11.71□□□□□ -0.53
CIRBP-218ENST00000588344 ITGB4P16144 1822 aa11.71□□□□□ -0.54
CIRBP-218ENST00000588344 KAT6BQ8WYB5 2073 aa11.71□□□□□ -0.54
CIRBP-218ENST00000588344 FANCIQ9NVI1 1328 aa11.7□□□□□ -0.54
CIRBP-218ENST00000588344 CT47B1P0C2W7 299 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms