RNA–Protein interactions for RNA: ENST00000588306.1

RDH13-210, Transcript of retinol dehydrogenase 13, humanhuman

TSL 5

Gene RDH13, Length 442 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-210ENST00000588306 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.38■□□□□ 0.21
RDH13-210ENST00000588306 MSL1Q68DK7 614 aa16.38■□□□□ 0.21
RDH13-210ENST00000588306 LINC00116Q8NCU8 138 aa16.38■□□□□ 0.21
RDH13-210ENST00000588306 NPC1L1Q9UHC9 1359 aa16.38■□□□□ 0.21
RDH13-210ENST00000588306 KDM6AO15550 1401 aaPredicted RBP16.37■□□□□ 0.21
RDH13-210ENST00000588306 PER1O15534 1290 aaPredicted RBP16.37■□□□□ 0.21
RDH13-210ENST00000588306 PHF14O94880 888 aa16.37■□□□□ 0.21
RDH13-210ENST00000588306 MTHFSP49914 203 aa16.37■□□□□ 0.21
RDH13-210ENST00000588306 CABP4P57796 275 aa16.37■□□□□ 0.21
RDH13-210ENST00000588306 AEBP1Q8IUX7 1158 aa16.37■□□□□ 0.21
RDH13-210ENST00000588306 CD2APQ9Y5K6 639 aa16.37■□□□□ 0.21
RDH13-210ENST00000588306 GNPATO15228 680 aa16.36■□□□□ 0.21
RDH13-210ENST00000588306 ITPK1Q13572 414 aa16.36■□□□□ 0.21
RDH13-210ENST00000588306 NLGN2Q8NFZ4 835 aa16.36■□□□□ 0.21
RDH13-210ENST00000588306 COL5A3P25940 1745 aaPredicted RBP16.34■□□□□ 0.21
RDH13-210ENST00000588306 SCN11AQ9UI33 1791 aa16.34■□□□□ 0.21
RDH13-210ENST00000588306 GRIN3BO60391 1043 aa16.34■□□□□ 0.21
RDH13-210ENST00000588306 AKAP4Q5JQC9 854 aa16.34■□□□□ 0.21
RDH13-210ENST00000588306 AMIGO3Q86WK7 504 aa16.34■□□□□ 0.21
RDH13-210ENST00000588306 PELP1Q8IZL8 1130 aaKnown RBP16.34■□□□□ 0.21
RDH13-210ENST00000588306 RBM42Q9BTD8 480 aaKnown RBP16.34■□□□□ 0.21
RDH13-210ENST00000588306 UTRNP46939 3433 aa16.33■□□□□ 0.2
RDH13-210ENST00000588306 ADRA2BP18089 450 aa16.33■□□□□ 0.2
RDH13-210ENST00000588306 RC3H1Q5TC82 1133 aaKnown RBP16.33■□□□□ 0.2
RDH13-210ENST00000588306 ZNF784Q8NCA9 323 aaPredicted RBP16.33■□□□□ 0.2
RDH13-210ENST00000588306 RTCBQ9Y3I0 505 aaKnown RBP16.33■□□□□ 0.2
RDH13-210ENST00000588306 CNTNAP4Q9C0A0 1308 aa16.33■□□□□ 0.2
RDH13-210ENST00000588306 DIAPH1O60610 1272 aaKnown RBP16.32■□□□□ 0.2
RDH13-210ENST00000588306 CC2D1BQ5T0F9 858 aaKnown RBP16.32■□□□□ 0.2
RDH13-210ENST00000588306 CICQ96RK0 1608 aaPredicted RBP16.31■□□□□ 0.2
RDH13-210ENST00000588306 TRAPPC3LQ5T215 181 aa16.31■□□□□ 0.2
RDH13-210ENST00000588306 NFATC2IPQ8NCF5 419 aa16.3■□□□□ 0.2
RDH13-210ENST00000588306 SLC4A9Q96Q91 983 aa16.3■□□□□ 0.2
RDH13-210ENST00000588306 MRC1P22897 1456 aa16.29■□□□□ 0.2
RDH13-210ENST00000588306 VIRMAQ69YN4 1812 aaKnown RBP16.29■□□□□ 0.2
RDH13-210ENST00000588306 RPS6KA4O75676 772 aa16.28■□□□□ 0.2
RDH13-210ENST00000588306 HMOX1P09601 288 aa16.28■□□□□ 0.2
RDH13-210ENST00000588306 YBX3P16989 372 aaKnown RBP eCLIP16.28■□□□□ 0.2
RDH13-210ENST00000588306 SMIM5Q71RC9 77 aa16.28■□□□□ 0.2
RDH13-210ENST00000588306 NLGN1Q8N2Q7 840 aa16.28■□□□□ 0.2
RDH13-210ENST00000588306 MYH14Q7Z406 1995 aaKnown RBP16.27■□□□□ 0.2
RDH13-210ENST00000588306 PTCD1O75127 700 aaKnown RBP16.27■□□□□ 0.2
RDH13-210ENST00000588306 RFC4P35249 363 aa16.27■□□□□ 0.2
RDH13-210ENST00000588306 SLC52A2Q9HAB3 445 aa16.27■□□□□ 0.2
RDH13-210ENST00000588306 MMP10P09238 476 aa16.26■□□□□ 0.19
RDH13-210ENST00000588306 ARHGEF1Q92888 912 aaKnown RBP16.26■□□□□ 0.19
RDH13-210ENST00000588306 COL3A1P02461 1466 aaPredicted RBP16.26■□□□□ 0.19
RDH13-210ENST00000588306 ADAMTS7Q9UKP4 1686 aa16.26■□□□□ 0.19
RDH13-210ENST00000588306 KIF13BQ9NQT8 1826 aa16.26■□□□□ 0.19
RDH13-210ENST00000588306 C4AP0C0L4 1744 aa16.25■□□□□ 0.19
RDH13-210ENST00000588306 TJP1Q07157 1748 aa16.25■□□□□ 0.19
RDH13-210ENST00000588306 RNMTO43148 476 aaKnown RBP16.25■□□□□ 0.19
RDH13-210ENST00000588306 CRKLP46109 303 aaKnown RBP16.24■□□□□ 0.19
RDH13-210ENST00000588306 MTHFSDQ2M296 383 aaKnown RBP16.24■□□□□ 0.19
RDH13-210ENST00000588306 GYS1P13807 737 aa16.23■□□□□ 0.19
RDH13-210ENST00000588306 GAS2L2Q8NHY3 880 aa16.23■□□□□ 0.19
RDH13-210ENST00000588306 CFAP53Q96M91 514 aa16.23■□□□□ 0.19
RDH13-210ENST00000588306 LGR6Q9HBX8 967 aa16.23■□□□□ 0.19
RDH13-210ENST00000588306 U2SURPO15042 1029 aaKnown RBP16.22■□□□□ 0.19
RDH13-210ENST00000588306 TGFB2P61812 414 aa16.22■□□□□ 0.19
RDH13-210ENST00000588306 CCDC87Q9NVE4 849 aa16.22■□□□□ 0.19
RDH13-210ENST00000588306 C10orf71Q711Q0 1435 aa16.21■□□□□ 0.19
RDH13-210ENST00000588306 VSIG10Q8N0Z9 540 aa16.21■□□□□ 0.19
RDH13-210ENST00000588306 PARP3Q9Y6F1 533 aa16.21■□□□□ 0.19
RDH13-210ENST00000588306 USP42Q9H9J4 1324 aaKnown RBP16.2■□□□□ 0.18
RDH13-210ENST00000588306 CNGB1Q14028 1251 aaPredicted RBP16.2■□□□□ 0.18
RDH13-210ENST00000588306 GOLGB1Q14789 3259 aaKnown RBP16.2■□□□□ 0.18
RDH13-210ENST00000588306 KCPQ6ZWJ8 1503 aa16.19■□□□□ 0.18
RDH13-210ENST00000588306 UBR2Q8IWV8 1755 aa16.19■□□□□ 0.18
RDH13-210ENST00000588306 PXDNLA1KZ92 1463 aa16.19■□□□□ 0.18
RDH13-210ENST00000588306 DNAJC10Q8IXB1 793 aa16.19■□□□□ 0.18
RDH13-210ENST00000588306 NUDCQ9Y266 331 aa16.19■□□□□ 0.18
RDH13-210ENST00000588306 GNAT3A8MTJ3 354 aa16.18■□□□□ 0.18
RDH13-210ENST00000588306 GIGYF1O75420 1035 aaPredicted RBP16.18■□□□□ 0.18
RDH13-210ENST00000588306 SLC39A6Q13433 755 aa16.18■□□□□ 0.18
RDH13-210ENST00000588306 INTS5Q6P9B9 1019 aaKnown RBP16.18■□□□□ 0.18
RDH13-210ENST00000588306 TTC5Q8N0Z6 440 aa16.18■□□□□ 0.18
RDH13-210ENST00000588306 KIAA1551Q9HCM1 1747 aa16.17■□□□□ 0.18
RDH13-210ENST00000588306 ZPR1O75312 459 aa16.17■□□□□ 0.18
RDH13-210ENST00000588306 CYP19A1P11511 503 aaPredicted RBP16.17■□□□□ 0.18
RDH13-210ENST00000588306 C1QTNF8P60827 252 aa16.17■□□□□ 0.18
RDH13-210ENST00000588306 TEFQ10587 303 aa16.17■□□□□ 0.18
RDH13-210ENST00000588306 SOS1Q07889 1333 aaPredicted RBP16.17■□□□□ 0.18
RDH13-210ENST00000588306 N4BP2Q86UW6 1770 aaPredicted RBP16.16■□□□□ 0.18
RDH13-210ENST00000588306 SIPA1L3O60292 1781 aaPredicted RBP16.15■□□□□ 0.18
RDH13-210ENST00000588306 ADCY9O60503 1353 aa16.15■□□□□ 0.18
RDH13-210ENST00000588306 BRCA1P38398 1863 aaKnown RBP16.15■□□□□ 0.18
RDH13-210ENST00000588306 ATP10DQ9P241 1426 aa16.15■□□□□ 0.18
RDH13-210ENST00000588306 SRP68Q9UHB9 627 aaKnown RBP16.15■□□□□ 0.18
RDH13-210ENST00000588306 COL15A1P39059 1388 aa16.14■□□□□ 0.17
RDH13-210ENST00000588306 STARD3NLO95772 234 aa16.14■□□□□ 0.17
RDH13-210ENST00000588306 PPP2R1AP30153 589 aa16.14■□□□□ 0.17
RDH13-210ENST00000588306 PRKAR2BP31323 418 aa16.14■□□□□ 0.17
RDH13-210ENST00000588306 FKBP8Q14318 412 aa16.14■□□□□ 0.17
RDH13-210ENST00000588306 TEX13AQ9BXU3 409 aaPredicted RBP16.14■□□□□ 0.17
RDH13-210ENST00000588306 RSPH6AQ9H0K4 717 aa16.14■□□□□ 0.17
RDH13-210ENST00000588306 CEMIPQ8WUJ3 1361 aa16.13■□□□□ 0.17
RDH13-210ENST00000588306 USPL1Q5W0Q7 1092 aa16.13■□□□□ 0.17
RDH13-210ENST00000588306 ZNF790Q6PG37 636 aa16.13■□□□□ 0.17
RDH13-210ENST00000588306 IL17REQ8NFR9 667 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms