RNA–Protein interactions for RNA: ENST00000588071.5

CCDC130-208, Transcript of coiled-coil domain containing 130, humanhuman

TSL 5

Gene CCDC130, Length 1,157 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-208ENST00000588071 MYH16Q9H6N6 1097 aa18.38■□□□□ 0.53
CCDC130-208ENST00000588071 TMOD3Q9NYL9 352 aa18.38■□□□□ 0.53
CCDC130-208ENST00000588071 PRIM1P49642 420 aaKnown RBP18.37■□□□□ 0.53
CCDC130-208ENST00000588071 SLFN5Q08AF3 891 aa18.37■□□□□ 0.53
CCDC130-208ENST00000588071 FAM196AQ6ZSG2 479 aa18.37■□□□□ 0.53
CCDC130-208ENST00000588071 MIS18AQ9NYP9 233 aa18.37■□□□□ 0.53
CCDC130-208ENST00000588071 RGS12O14924 1447 aa18.37■□□□□ 0.53
CCDC130-208ENST00000588071 DOT1LQ8TEK3 1739 aa18.36■□□□□ 0.53
CCDC130-208ENST00000588071 SPINK5Q9NQ38 1064 aaPredicted RBP18.36■□□□□ 0.53
CCDC130-208ENST00000588071 BABAM1Q9NWV8 329 aa18.36■□□□□ 0.53
CCDC130-208ENST00000588071 TSPYL4Q9UJ04 414 aa18.36■□□□□ 0.53
CCDC130-208ENST00000588071 TOGARAM1Q9Y4F4 1720 aa18.36■□□□□ 0.53
CCDC130-208ENST00000588071 SIPA1L3O60292 1781 aaPredicted RBP18.35■□□□□ 0.53
CCDC130-208ENST00000588071 CHL1O00533 1208 aa18.35■□□□□ 0.53
CCDC130-208ENST00000588071 ZNF853P0CG23 659 aa18.35■□□□□ 0.53
CCDC130-208ENST00000588071 MBIPQ9NS73 344 aa18.34■□□□□ 0.53
CCDC130-208ENST00000588071 SBF2Q86WG5 1849 aa18.33■□□□□ 0.53
CCDC130-208ENST00000588071 PIGBQ92521 554 aa18.33■□□□□ 0.52
CCDC130-208ENST00000588071 TSR2Q969E8 191 aaKnown RBP18.33■□□□□ 0.52
CCDC130-208ENST00000588071 TTC5Q8N0Z6 440 aa18.32■□□□□ 0.52
CCDC130-208ENST00000588071 MRC1P22897 1456 aa18.32■□□□□ 0.52
CCDC130-208ENST00000588071 BCL9O00512 1426 aa18.32■□□□□ 0.52
CCDC130-208ENST00000588071 FANCIQ9NVI1 1328 aa18.31■□□□□ 0.52
CCDC130-208ENST00000588071 KCNQ2O43526 872 aa18.31■□□□□ 0.52
CCDC130-208ENST00000588071 SLC39A6Q13433 755 aa18.31■□□□□ 0.52
CCDC130-208ENST00000588071 TRMT2AQ8IZ69 625 aaKnown RBP18.31■□□□□ 0.52
CCDC130-208ENST00000588071 DUSP27Q5VZP5 1158 aa18.3■□□□□ 0.52
CCDC130-208ENST00000588071 ZNF790Q6PG37 636 aa18.3■□□□□ 0.52
CCDC130-208ENST00000588071 KCNQ3O43525 872 aa18.29■□□□□ 0.52
CCDC130-208ENST00000588071 KDM3BQ7LBC6 1761 aa18.29■□□□□ 0.52
CCDC130-208ENST00000588071 TRIM37O94972 964 aa18.27■□□□□ 0.52
CCDC130-208ENST00000588071 EXOSC9Q06265 439 aaKnown RBP18.27■□□□□ 0.52
CCDC130-208ENST00000588071 BCL11BQ9C0K0 894 aaPredicted RBP18.27■□□□□ 0.52
CCDC130-208ENST00000588071 ATG3Q9NT62 314 aa18.27■□□□□ 0.52
CCDC130-208ENST00000588071 ASAP1Q9ULH1 1129 aa18.27■□□□□ 0.52
CCDC130-208ENST00000588071 NHSQ6T4R5 1651 aa18.27■□□□□ 0.52
CCDC130-208ENST00000588071 EIF4A1P60842 406 aaKnown RBP18.26■□□□□ 0.51
CCDC130-208ENST00000588071 SMARCC1Q92922 1105 aaPredicted RBP18.26■□□□□ 0.51
CCDC130-208ENST00000588071 BTAF1O14981 1849 aa18.26■□□□□ 0.51
CCDC130-208ENST00000588071 ELL2O00472 640 aaPredicted RBP18.25■□□□□ 0.51
CCDC130-208ENST00000588071 CENPBP07199 599 aaPredicted RBP18.25■□□□□ 0.51
CCDC130-208ENST00000588071 PTF1AQ7RTS3 328 aa18.25■□□□□ 0.51
CCDC130-208ENST00000588071 FMNL2Q96PY5 1086 aa18.25■□□□□ 0.51
CCDC130-208ENST00000588071 RBM42Q9BTD8 480 aaKnown RBP18.25■□□□□ 0.51
CCDC130-208ENST00000588071 PTCD1O75127 700 aaKnown RBP18.24■□□□□ 0.51
CCDC130-208ENST00000588071 C8orf58Q8NAV2 365 aa18.24■□□□□ 0.51
CCDC130-208ENST00000588071 KRT24Q2M2I5 525 aa18.23■□□□□ 0.51
CCDC130-208ENST00000588071 ZNF496Q96IT1 587 aaPredicted RBP18.23■□□□□ 0.51
CCDC130-208ENST00000588071 TWISTNBQ3B726 338 aaPredicted RBP18.22■□□□□ 0.51
CCDC130-208ENST00000588071 PAPPAQ13219 1627 aa18.22■□□□□ 0.51
CCDC130-208ENST00000588071 SNRPA1P09661 255 aaKnown RBP18.21■□□□□ 0.51
CCDC130-208ENST00000588071 TSPYL6Q8N831 410 aa18.21■□□□□ 0.51
CCDC130-208ENST00000588071 UBR2Q8IWV8 1755 aa18.21■□□□□ 0.51
CCDC130-208ENST00000588071 PALLDQ8WX93 1383 aa18.2■□□□□ 0.5
CCDC130-208ENST00000588071 VAMP4O75379 141 aa18.2■□□□□ 0.5
CCDC130-208ENST00000588071 GIGYF1O75420 1035 aaPredicted RBP18.2■□□□□ 0.5
CCDC130-208ENST00000588071 CT47B1P0C2W7 299 aaPredicted RBP18.2■□□□□ 0.5
CCDC130-208ENST00000588071 HEG1Q9ULI3 1381 aa18.19■□□□□ 0.5
CCDC130-208ENST00000588071 APBA3O96018 575 aa18.19■□□□□ 0.5
CCDC130-208ENST00000588071 EIF2S2P20042 333 aaKnown RBP18.19■□□□□ 0.5
CCDC130-208ENST00000588071 SOS1Q07889 1333 aaPredicted RBP18.19■□□□□ 0.5
CCDC130-208ENST00000588071 LOC102724428A0A0B4J2F2 783 aa18.18■□□□□ 0.5
CCDC130-208ENST00000588071 HOXB7P09629 217 aa18.18■□□□□ 0.5
CCDC130-208ENST00000588071 ATP6V1AP38606 617 aa18.18■□□□□ 0.5
CCDC130-208ENST00000588071 SIK1P57059 783 aa18.18■□□□□ 0.5
CCDC130-208ENST00000588071 SF3B2Q13435 895 aaKnown RBP18.18■□□□□ 0.5
CCDC130-208ENST00000588071 VSIG10Q8N0Z9 540 aa18.18■□□□□ 0.5
CCDC130-208ENST00000588071 TEX13AQ9BXU3 409 aaPredicted RBP18.18■□□□□ 0.5
CCDC130-208ENST00000588071 CHMP4AQ9BY43 222 aa18.18■□□□□ 0.5
CCDC130-208ENST00000588071 KCPQ6ZWJ8 1503 aa18.18■□□□□ 0.5
CCDC130-208ENST00000588071 PRAMEF22A3QJZ6 481 aa18.16■□□□□ 0.5
CCDC130-208ENST00000588071 NECTIN2Q92692 538 aa18.16■□□□□ 0.5
CCDC130-208ENST00000588071 USP16Q9Y5T5 823 aa18.16■□□□□ 0.5
CCDC130-208ENST00000588071 HDGFL1Q5TGJ6 251 aa18.15■□□□□ 0.5
CCDC130-208ENST00000588071 CCDC30Q5VVM6 783 aa18.15■□□□□ 0.5
CCDC130-208ENST00000588071 DNAJC10Q8IXB1 793 aa18.15■□□□□ 0.5
CCDC130-208ENST00000588071 ZNF428Q96B54 188 aa18.15■□□□□ 0.5
CCDC130-208ENST00000588071 RCAN3Q9UKA8 241 aa18.15■□□□□ 0.5
CCDC130-208ENST00000588071 C5P01031 1676 aa18.15■□□□□ 0.5
CCDC130-208ENST00000588071 LY75O60449 1722 aa18.15■□□□□ 0.5
CCDC130-208ENST00000588071 CACNA1FO60840 1977 aa18.14■□□□□ 0.49
CCDC130-208ENST00000588071 PLSCR1O15162 318 aa18.14■□□□□ 0.49
CCDC130-208ENST00000588071 STARD3NLO95772 234 aa18.14■□□□□ 0.49
CCDC130-208ENST00000588071 SLC4A9Q96Q91 983 aa18.14■□□□□ 0.49
CCDC130-208ENST00000588071 CCNL1Q9UK58 526 aaPredicted RBP18.14■□□□□ 0.49
CCDC130-208ENST00000588071 TNS1Q9HBL0 1735 aaKnown RBP18.13■□□□□ 0.49
CCDC130-208ENST00000588071 TCERG1O14776 1098 aaKnown RBP18.13■□□□□ 0.49
CCDC130-208ENST00000588071 STK31Q9BXU1 1019 aa18.13■□□□□ 0.49
CCDC130-208ENST00000588071 RARSP54136 660 aaKnown RBP18.12■□□□□ 0.49
CCDC130-208ENST00000588071 CCDC125Q86Z20 511 aa18.12■□□□□ 0.49
CCDC130-208ENST00000588071 LAMB4A4D0S4 1761 aa18.12■□□□□ 0.49
CCDC130-208ENST00000588071 HMGB2P26583 209 aaKnown RBP18.11■□□□□ 0.49
CCDC130-208ENST00000588071 KCNQ4P56696 695 aa18.11■□□□□ 0.49
CCDC130-208ENST00000588071 ALDH1L2Q3SY69 923 aa18.11■□□□□ 0.49
CCDC130-208ENST00000588071 SLC27A3Q5K4L6 730 aa18.11■□□□□ 0.49
CCDC130-208ENST00000588071 SSH1Q8WYL5 1049 aa18.11■□□□□ 0.49
CCDC130-208ENST00000588071 SMC4Q9NTJ3 1288 aa18.11■□□□□ 0.49
CCDC130-208ENST00000588071 TJP1Q07157 1748 aa18.1■□□□□ 0.49
CCDC130-208ENST00000588071 ZNF831Q5JPB2 1677 aa18.1■□□□□ 0.49
CCDC130-208ENST00000588071 SLC4A2P04920 1241 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms