RNA–Protein interactions for RNA: ENST00000588019.1

NLE1-204, Transcript of notchless homolog 1, humanhuman

TSL 5

Gene NLE1, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-204ENST00000588019 MIS18AQ9NYP9 233 aa20.92■□□□□ 0.94
NLE1-204ENST00000588019 NFATC2IPQ8NCF5 419 aa20.91■□□□□ 0.94
NLE1-204ENST00000588019 ZNF428Q96B54 188 aa20.91■□□□□ 0.94
NLE1-204ENST00000588019 THSD7AQ9UPZ6 1657 aa20.9■□□□□ 0.94
NLE1-204ENST00000588019 RBM6P78332 1123 aaKnown RBP20.89■□□□□ 0.93
NLE1-204ENST00000588019 MARCH10Q8NA82 808 aaPredicted RBP20.89■□□□□ 0.93
NLE1-204ENST00000588019 SOS1Q07889 1333 aaPredicted RBP20.88■□□□□ 0.93
NLE1-204ENST00000588019 TWISTNBQ3B726 338 aaPredicted RBP20.88■□□□□ 0.93
NLE1-204ENST00000588019 SUPT16HQ9Y5B9 1047 aaKnown RBP20.88■□□□□ 0.93
NLE1-204ENST00000588019 SEPT12Q8IYM1 358 aa20.87■□□□□ 0.93
NLE1-204ENST00000588019 C8orf58Q8NAV2 365 aa20.87■□□□□ 0.93
NLE1-204ENST00000588019 TMOD3Q9NYL9 352 aa20.87■□□□□ 0.93
NLE1-204ENST00000588019 VIRMAQ69YN4 1812 aaKnown RBP20.87■□□□□ 0.93
NLE1-204ENST00000588019 VAMP4O75379 141 aa20.86■□□□□ 0.93
NLE1-204ENST00000588019 EIF4A1P60842 406 aaKnown RBP20.86■□□□□ 0.93
NLE1-204ENST00000588019 SIPA1L3O60292 1781 aaPredicted RBP20.86■□□□□ 0.93
NLE1-204ENST00000588019 RARSP54136 660 aaKnown RBP20.85■□□□□ 0.93
NLE1-204ENST00000588019 ZNF790Q6PG37 636 aa20.85■□□□□ 0.93
NLE1-204ENST00000588019 TTC5Q8N0Z6 440 aa20.85■□□□□ 0.93
NLE1-204ENST00000588019 TSPYL6Q8N831 410 aa20.85■□□□□ 0.93
NLE1-204ENST00000588019 CHMP4AQ9BY43 222 aa20.85■□□□□ 0.93
NLE1-204ENST00000588019 ELL2O00472 640 aaPredicted RBP20.84■□□□□ 0.93
NLE1-204ENST00000588019 ALDH1L2Q3SY69 923 aa20.84■□□□□ 0.93
NLE1-204ENST00000588019 KDM3BQ7LBC6 1761 aa20.84■□□□□ 0.93
NLE1-204ENST00000588019 RNF123Q5XPI4 1314 aa20.83■□□□□ 0.93
NLE1-204ENST00000588019 HOXB7P09629 217 aa20.83■□□□□ 0.93
NLE1-204ENST00000588019 KCNQ3O43525 872 aa20.82■□□□□ 0.92
NLE1-204ENST00000588019 RXRBP28702 533 aa20.82■□□□□ 0.92
NLE1-204ENST00000588019 SLC39A6Q13433 755 aa20.82■□□□□ 0.92
NLE1-204ENST00000588019 KRT24Q2M2I5 525 aa20.82■□□□□ 0.92
NLE1-204ENST00000588019 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.82■□□□□ 0.92
NLE1-204ENST00000588019 TOGARAM1Q9Y4F4 1720 aa20.81■□□□□ 0.92
NLE1-204ENST00000588019 PRIM1P49642 420 aaKnown RBP20.81■□□□□ 0.92
NLE1-204ENST00000588019 PIGBQ92521 554 aa20.81■□□□□ 0.92
NLE1-204ENST00000588019 BCL9O00512 1426 aa20.8■□□□□ 0.92
NLE1-204ENST00000588019 SYTL4Q96C24 671 aaPredicted RBP20.8■□□□□ 0.92
NLE1-204ENST00000588019 FMNL2Q96PY5 1086 aa20.8■□□□□ 0.92
NLE1-204ENST00000588019 HEG1Q9ULI3 1381 aa20.8■□□□□ 0.92
NLE1-204ENST00000588019 BCAR3O75815 825 aa20.79■□□□□ 0.92
NLE1-204ENST00000588019 NEFLP07196 543 aa20.79■□□□□ 0.92
NLE1-204ENST00000588019 RRP1P56182 461 aaKnown RBP20.79■□□□□ 0.92
NLE1-204ENST00000588019 SSH1Q8WYL5 1049 aa20.79■□□□□ 0.92
NLE1-204ENST00000588019 SMC4Q9NTJ3 1288 aa20.79■□□□□ 0.92
NLE1-204ENST00000588019 RGS17Q9UGC6 210 aaPredicted RBP20.79■□□□□ 0.92
NLE1-204ENST00000588019 GIGYF1O75420 1035 aaPredicted RBP20.78■□□□□ 0.92
NLE1-204ENST00000588019 BRPF1P55201 1214 aaPredicted RBP20.77■□□□□ 0.92
NLE1-204ENST00000588019 CCDC30Q5VVM6 783 aa20.77■□□□□ 0.92
NLE1-204ENST00000588019 KRT27Q7Z3Y8 459 aa20.77■□□□□ 0.92
NLE1-204ENST00000588019 ILDR1Q86SU0 546 aaPredicted RBP20.77■□□□□ 0.92
NLE1-204ENST00000588019 ACSBG1Q96GR2 724 aa20.77■□□□□ 0.92
NLE1-204ENST00000588019 ZNF496Q96IT1 587 aaPredicted RBP20.77■□□□□ 0.92
NLE1-204ENST00000588019 DOT1LQ8TEK3 1739 aa20.76■□□□□ 0.91
NLE1-204ENST00000588019 SNRPA1P09661 255 aaKnown RBP20.76■□□□□ 0.91
NLE1-204ENST00000588019 BCL2L13Q9BXK5 485 aa20.75■□□□□ 0.91
NLE1-204ENST00000588019 STK31Q9BXU1 1019 aa20.75■□□□□ 0.91
NLE1-204ENST00000588019 ATG3Q9NT62 314 aa20.75■□□□□ 0.91
NLE1-204ENST00000588019 KIF16BQ96L93 1317 aa20.75■□□□□ 0.91
NLE1-204ENST00000588019 PAPPAQ13219 1627 aa20.75■□□□□ 0.91
NLE1-204ENST00000588019 CANXP27824 592 aaKnown RBP20.74■□□□□ 0.91
NLE1-204ENST00000588019 HDGFL1Q5TGJ6 251 aa20.74■□□□□ 0.91
NLE1-204ENST00000588019 POTEAQ6S8J7 498 aa20.74■□□□□ 0.91
NLE1-204ENST00000588019 MRPL50Q8N5N7 158 aaKnown RBP20.74■□□□□ 0.91
NLE1-204ENST00000588019 ASAP1Q9ULH1 1129 aa20.74■□□□□ 0.91
NLE1-204ENST00000588019 ITGB4P16144 1822 aa20.74■□□□□ 0.91
NLE1-204ENST00000588019 IPO8O15397 1037 aaKnown RBP20.73■□□□□ 0.91
NLE1-204ENST00000588019 FAM196AQ6ZSG2 479 aa20.73■□□□□ 0.91
NLE1-204ENST00000588019 SMARCC1Q92922 1105 aaPredicted RBP20.73■□□□□ 0.91
NLE1-204ENST00000588019 VSIG10Q8N0Z9 540 aa20.72■□□□□ 0.91
NLE1-204ENST00000588019 FRAT1Q92837 279 aaPredicted RBP20.72■□□□□ 0.91
NLE1-204ENST00000588019 PTCD1O75127 700 aaKnown RBP20.71■□□□□ 0.91
NLE1-204ENST00000588019 EIF2S2P20042 333 aaKnown RBP20.71■□□□□ 0.91
NLE1-204ENST00000588019 TEX13AQ9BXU3 409 aaPredicted RBP20.71■□□□□ 0.91
NLE1-204ENST00000588019 KCPQ6ZWJ8 1503 aa20.71■□□□□ 0.91
NLE1-204ENST00000588019 TCERG1O14776 1098 aaKnown RBP20.7■□□□□ 0.9
NLE1-204ENST00000588019 KCNQ2O43526 872 aa20.7■□□□□ 0.9
NLE1-204ENST00000588019 PLIN1O60240 522 aa20.7■□□□□ 0.9
NLE1-204ENST00000588019 MS4A1P11836 297 aa20.7■□□□□ 0.9
NLE1-204ENST00000588019 FAM182BQ5T319 152 aa20.7■□□□□ 0.9
NLE1-204ENST00000588019 ZKSCAN2Q63HK3 967 aa20.7■□□□□ 0.9
NLE1-204ENST00000588019 ARHGAP45Q92619 1136 aa20.7■□□□□ 0.9
NLE1-204ENST00000588019 UBR2Q8IWV8 1755 aa20.69■□□□□ 0.9
NLE1-204ENST00000588019 SLC4A2P04920 1241 aa20.69■□□□□ 0.9
NLE1-204ENST00000588019 RBM42Q9BTD8 480 aaKnown RBP20.69■□□□□ 0.9
NLE1-204ENST00000588019 NOB1Q9ULX3 412 aaKnown RBP20.69■□□□□ 0.9
NLE1-204ENST00000588019 PRAMEF22A3QJZ6 481 aa20.68■□□□□ 0.9
NLE1-204ENST00000588019 PDE3AQ14432 1141 aa20.68■□□□□ 0.9
NLE1-204ENST00000588019 NECTIN2Q92692 538 aa20.68■□□□□ 0.9
NLE1-204ENST00000588019 DBF4Q9UBU7 674 aaPredicted RBP20.68■□□□□ 0.9
NLE1-204ENST00000588019 RGS12O14924 1447 aa20.68■□□□□ 0.9
NLE1-204ENST00000588019 NHSQ6T4R5 1651 aa20.67■□□□□ 0.9
NLE1-204ENST00000588019 ATF7IPQ6VMQ6 1270 aa20.66■□□□□ 0.9
NLE1-204ENST00000588019 BCL11BQ9C0K0 894 aaPredicted RBP20.66■□□□□ 0.9
NLE1-204ENST00000588019 USP16Q9Y5T5 823 aa20.66■□□□□ 0.9
NLE1-204ENST00000588019 PTPRCP08575 1304 aa20.66■□□□□ 0.9
NLE1-204ENST00000588019 ERBB4Q15303 1308 aa20.66■□□□□ 0.9
NLE1-204ENST00000588019 BRWD3Q6RI45 1802 aa20.65■□□□□ 0.9
NLE1-204ENST00000588019 PALLDQ8WX93 1383 aa20.65■□□□□ 0.9
NLE1-204ENST00000588019 FKBP8Q14318 412 aa20.65■□□□□ 0.9
NLE1-204ENST00000588019 API5Q9BZZ5 524 aaKnown RBP20.65■□□□□ 0.9
NLE1-204ENST00000588019 DDX21Q9NR30 783 aaKnown RBP eCLIP20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms