RNA–Protein interactions for RNA: ENST00000587958.1

GRN-210, Transcript of granulin precursor, humanhuman

TSL 2

Gene GRN, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-210ENST00000587958 SMARCC1Q92922 1105 aaPredicted RBP20.13■□□□□ 0.81
GRN-210ENST00000587958 RBM42Q9BTD8 480 aaKnown RBP20.13■□□□□ 0.81
GRN-210ENST00000587958 RNMTO43148 476 aaKnown RBP20.12■□□□□ 0.81
GRN-210ENST00000587958 HSP90AB1P08238 724 aaKnown RBP20.12■□□□□ 0.81
GRN-210ENST00000587958 PRKAR2BP31323 418 aa20.12■□□□□ 0.81
GRN-210ENST00000587958 AKAP4Q5JQC9 854 aa20.12■□□□□ 0.81
GRN-210ENST00000587958 CFAP53Q96M91 514 aa20.12■□□□□ 0.81
GRN-210ENST00000587958 RSPH6AQ9H0K4 717 aa20.12■□□□□ 0.81
GRN-210ENST00000587958 MYH14Q7Z406 1995 aaKnown RBP20.12■□□□□ 0.81
GRN-210ENST00000587958 PLEKHG2Q9H7P9 1386 aa20.11■□□□□ 0.81
GRN-210ENST00000587958 MSH5O43196 834 aa20.11■□□□□ 0.81
GRN-210ENST00000587958 U2AF1L5P0DN76 240 aaPredicted RBP20.11■□□□□ 0.81
GRN-210ENST00000587958 ATP6V1AP38606 617 aa20.11■□□□□ 0.81
GRN-210ENST00000587958 U2AF1Q01081 240 aaKnown RBP eCLIP20.11■□□□□ 0.81
GRN-210ENST00000587958 SGIP1Q9BQI5 828 aa20.11■□□□□ 0.81
GRN-210ENST00000587958 PPP1R1BQ9UD71 204 aaPredicted RBP20.11■□□□□ 0.81
GRN-210ENST00000587958 ADAMTS7Q9UKP4 1686 aa20.1■□□□□ 0.81
GRN-210ENST00000587958 PTCD1O75127 700 aaKnown RBP20.1■□□□□ 0.81
GRN-210ENST00000587958 PHF14O94880 888 aa20.1■□□□□ 0.81
GRN-210ENST00000587958 SLC39A6Q13433 755 aa20.1■□□□□ 0.81
GRN-210ENST00000587958 MSL1Q68DK7 614 aa20.1■□□□□ 0.81
GRN-210ENST00000587958 MTFR1LQ9H019 292 aa20.1■□□□□ 0.81
GRN-210ENST00000587958 COL5A3P25940 1745 aaPredicted RBP20.09■□□□□ 0.81
GRN-210ENST00000587958 IL17REQ8NFR9 667 aa20.08■□□□□ 0.81
GRN-210ENST00000587958 TJP1Q07157 1748 aa20.07■□□□□ 0.8
GRN-210ENST00000587958 COL24A1Q17RW2 1714 aa20.07■□□□□ 0.8
GRN-210ENST00000587958 SLC52A2Q9HAB3 445 aa20.07■□□□□ 0.8
GRN-210ENST00000587958 DLG5Q8TDM6 1919 aa20.07■□□□□ 0.8
GRN-210ENST00000587958 SIPA1L3O60292 1781 aaPredicted RBP20.06■□□□□ 0.8
GRN-210ENST00000587958 AK7Q96M32 723 aa20.05■□□□□ 0.8
GRN-210ENST00000587958 NUDCQ9Y266 331 aa20.05■□□□□ 0.8
GRN-210ENST00000587958 MRC1P22897 1456 aa20.05■□□□□ 0.8
GRN-210ENST00000587958 MAP3K5Q99683 1374 aa20.04■□□□□ 0.8
GRN-210ENST00000587958 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.03■□□□□ 0.8
GRN-210ENST00000587958 GNPATO15228 680 aa20.03■□□□□ 0.8
GRN-210ENST00000587958 DCTN1Q14203 1278 aa20.03■□□□□ 0.8
GRN-210ENST00000587958 FHDC1Q9C0D6 1143 aaPredicted RBP20.03■□□□□ 0.8
GRN-210ENST00000587958 ZNF831Q5JPB2 1677 aa20.03■□□□□ 0.8
GRN-210ENST00000587958 GNAT3A8MTJ3 354 aa20.02■□□□□ 0.8
GRN-210ENST00000587958 ZEB1P37275 1124 aaPredicted RBP20.02■□□□□ 0.8
GRN-210ENST00000587958 KCPQ6ZWJ8 1503 aa20.02■□□□□ 0.79
GRN-210ENST00000587958 KCNQ3O43525 872 aa20.01■□□□□ 0.79
GRN-210ENST00000587958 MCM10Q7L590 875 aa20.01■□□□□ 0.79
GRN-210ENST00000587958 KLHL34Q8N239 644 aa20.01■□□□□ 0.79
GRN-210ENST00000587958 ARXQ96QS3 562 aa20.01■□□□□ 0.79
GRN-210ENST00000587958 UBR2Q8IWV8 1755 aa20■□□□□ 0.79
GRN-210ENST00000587958 DNAJC10Q8IXB1 793 aa20■□□□□ 0.79
GRN-210ENST00000587958 GAS2L2Q8NHY3 880 aa20■□□□□ 0.79
GRN-210ENST00000587958 FCHSD2O94868 740 aa19.99■□□□□ 0.79
GRN-210ENST00000587958 RALBP1Q15311 655 aa19.99■□□□□ 0.79
GRN-210ENST00000587958 SLC16A10Q8TF71 515 aa19.99■□□□□ 0.79
GRN-210ENST00000587958 SYT17Q9BSW7 474 aa19.99■□□□□ 0.79
GRN-210ENST00000587958 C4AP0C0L4 1744 aa19.99■□□□□ 0.79
GRN-210ENST00000587958 PLEKHF1Q96S99 279 aa19.98■□□□□ 0.79
GRN-210ENST00000587958 CRKLP46109 303 aaKnown RBP19.96■□□□□ 0.79
GRN-210ENST00000587958 INTS5Q6P9B9 1019 aaKnown RBP19.96■□□□□ 0.79
GRN-210ENST00000587958 NLGN2Q8NFZ4 835 aa19.95■□□□□ 0.78
GRN-210ENST00000587958 ARHGEF1Q92888 912 aaKnown RBP19.95■□□□□ 0.78
GRN-210ENST00000587958 ZNF496Q96IT1 587 aaPredicted RBP19.95■□□□□ 0.78
GRN-210ENST00000587958 THUMPD2Q9BTF0 503 aaKnown RBP19.95■□□□□ 0.78
GRN-210ENST00000587958 MYBBP1AQ9BQG0 1328 aaKnown RBP19.95■□□□□ 0.78
GRN-210ENST00000587958 CEMIPQ8WUJ3 1361 aa19.95■□□□□ 0.78
GRN-210ENST00000587958 SSFA2P28290 1259 aa19.94■□□□□ 0.78
GRN-210ENST00000587958 TEFQ10587 303 aa19.94■□□□□ 0.78
GRN-210ENST00000587958 PRKRIP1Q9H875 184 aaPredicted RBP19.94■□□□□ 0.78
GRN-210ENST00000587958 MIS18AQ9NYP9 233 aa19.94■□□□□ 0.78
GRN-210ENST00000587958 CICQ96RK0 1608 aaPredicted RBP19.94■□□□□ 0.78
GRN-210ENST00000587958 POLD1P28340 1107 aa19.93■□□□□ 0.78
GRN-210ENST00000587958 CCDC184Q52MB2 194 aa19.93■□□□□ 0.78
GRN-210ENST00000587958 CCDC146Q8IYE0 955 aa19.93■□□□□ 0.78
GRN-210ENST00000587958 SRP68Q9UHB9 627 aaKnown RBP19.93■□□□□ 0.78
GRN-210ENST00000587958 RTCBQ9Y3I0 505 aaKnown RBP19.93■□□□□ 0.78
GRN-210ENST00000587958 CNTNAP4Q9C0A0 1308 aa19.93■□□□□ 0.78
GRN-210ENST00000587958 PRAMEF22A3QJZ6 481 aa19.92■□□□□ 0.78
GRN-210ENST00000587958 ZNF316A6NFI3 1004 aaPredicted RBP19.92■□□□□ 0.78
GRN-210ENST00000587958 RPS6KA4O75676 772 aa19.92■□□□□ 0.78
GRN-210ENST00000587958 CYP19A1P11511 503 aaPredicted RBP19.92■□□□□ 0.78
GRN-210ENST00000587958 TRAPPC3LQ5T215 181 aa19.92■□□□□ 0.78
GRN-210ENST00000587958 RC3H1Q5TC82 1133 aaKnown RBP19.92■□□□□ 0.78
GRN-210ENST00000587958 FLAD1Q8NFF5 587 aa19.92■□□□□ 0.78
GRN-210ENST00000587958 ZNF790Q6PG37 636 aa19.91■□□□□ 0.78
GRN-210ENST00000587958 BTBD11A6QL63 1104 aa19.89■□□□□ 0.77
GRN-210ENST00000587958 WWC3Q9ULE0 1092 aa19.89■□□□□ 0.77
GRN-210ENST00000587958 ZBTB1Q9Y2K1 713 aa19.89■□□□□ 0.77
GRN-210ENST00000587958 RRP7AQ9Y3A4 280 aaKnown RBP19.89■□□□□ 0.77
GRN-210ENST00000587958 PIP4K2AP48426 406 aaPredicted RBP19.88■□□□□ 0.77
GRN-210ENST00000587958 TTC5Q8N0Z6 440 aa19.88■□□□□ 0.77
GRN-210ENST00000587958 RTF1Q92541 710 aaKnown RBP19.88■□□□□ 0.77
GRN-210ENST00000587958 CCDC87Q9NVE4 849 aa19.88■□□□□ 0.77
GRN-210ENST00000587958 HEG1Q9ULI3 1381 aa19.87■□□□□ 0.77
GRN-210ENST00000587958 SENP3-EIF4A1A0A087X0R7 540 aa19.87■□□□□ 0.77
GRN-210ENST00000587958 GYS1P13807 737 aa19.87■□□□□ 0.77
GRN-210ENST00000587958 CANXP27824 592 aaKnown RBP19.87■□□□□ 0.77
GRN-210ENST00000587958 NFE2L2Q16236 605 aa19.87■□□□□ 0.77
GRN-210ENST00000587958 MMP10P09238 476 aa19.86■□□□□ 0.77
GRN-210ENST00000587958 RFC4P35249 363 aa19.86■□□□□ 0.77
GRN-210ENST00000587958 ADAMTS8Q9UP79 889 aa19.86■□□□□ 0.77
GRN-210ENST00000587958 USP16Q9Y5T5 823 aa19.85■□□□□ 0.77
GRN-210ENST00000587958 SOS1Q07889 1333 aaPredicted RBP19.84■□□□□ 0.77
GRN-210ENST00000587958 A1BGP04217 495 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms