RNA–Protein interactions for RNA: ENST00000587928.5

ILF3-208, Transcript of interleukin enhancer binding factor 3, human

TSL 2

Gene ILF3, Length 4,230 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ILF3-208	ENST00000587928	FSD2	A1L4K1	749 aa		13.66	□□□□□ -0.22
ILF3-208	ENST00000587928	NAP1L2	Q9ULW6	460 aa	Predicted RBP	13.66	□□□□□ -0.22
ILF3-208	ENST00000587928	PTPRC	P08575	1304 aa		13.65	□□□□□ -0.22
ILF3-208	ENST00000587928	ARAP2	Q8WZ64	1704 aa		13.65	□□□□□ -0.22
ILF3-208	ENST00000587928	HSP90AB2P	Q58FF8	381 aa		13.65	□□□□□ -0.22
ILF3-208	ENST00000587928	CHD1L	Q86WJ1	897 aa		13.65	□□□□□ -0.22
ILF3-208	ENST00000587928	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.65	□□□□□ -0.22
ILF3-208	ENST00000587928	GCC1	Q96CN9	775 aa		13.64	□□□□□ -0.23
ILF3-208	ENST00000587928	BRD2	P25440	801 aa	Known RBP	13.64	□□□□□ -0.23
ILF3-208	ENST00000587928	AMOTL2	Q9Y2J4	779 aa		13.64	□□□□□ -0.23
ILF3-208	ENST00000587928	CYP2E1	P05181	493 aa	Predicted RBP	13.63	□□□□□ -0.23
ILF3-208	ENST00000587928	HMOX1	P09601	288 aa		13.63	□□□□□ -0.23
ILF3-208	ENST00000587928	ANKRD44	Q8N8A2	993 aa		13.63	□□□□□ -0.23
ILF3-208	ENST00000587928	COG3	Q96JB2	828 aa		13.63	□□□□□ -0.23
ILF3-208	ENST00000587928	MTERF4	Q7Z6M4	381 aa	Known RBP	13.63	□□□□□ -0.23
ILF3-208	ENST00000587928	HOMEZ	Q8IX15	550 aa		13.63	□□□□□ -0.23
ILF3-208	ENST00000587928	CD2BP2	O95400	341 aa	Known RBP	13.63	□□□□□ -0.23
ILF3-208	ENST00000587928	PLEKHM2	Q8IWE5	1019 aa		13.63	□□□□□ -0.23
ILF3-208	ENST00000587928	ITGB4	P16144	1822 aa		13.62	□□□□□ -0.23
ILF3-208	ENST00000587928	MTHFSD	Q2M296	383 aa	Known RBP	13.62	□□□□□ -0.23
ILF3-208	ENST00000587928	FRAT1	Q92837	279 aa	Predicted RBP	13.62	□□□□□ -0.23
ILF3-208	ENST00000587928	PHLPP1	O60346	1717 aa		13.62	□□□□□ -0.23
ILF3-208	ENST00000587928	CEP85	Q6P2H3	762 aa		13.62	□□□□□ -0.23
ILF3-208	ENST00000587928	EID1	Q9Y6B2	187 aa		13.62	□□□□□ -0.23
ILF3-208	ENST00000587928	TWISTNB	Q3B726	338 aa	Predicted RBP	13.62	□□□□□ -0.23
ILF3-208	ENST00000587928	EYA1	Q99502	592 aa		13.62	□□□□□ -0.23
ILF3-208	ENST00000587928	SPEF2	Q9C093	1822 aa		13.62	□□□□□ -0.23
ILF3-208	ENST00000587928	SLC4A3	P48751	1232 aa		13.61	□□□□□ -0.23
ILF3-208	ENST00000587928	KCP	Q6ZWJ8	1503 aa		13.61	□□□□□ -0.23
ILF3-208	ENST00000587928	ZNF831	Q5JPB2	1677 aa		13.61	□□□□□ -0.23
ILF3-208	ENST00000587928	HOXC9	P31274	260 aa		13.61	□□□□□ -0.23
ILF3-208	ENST00000587928	LAMB2	P55268	1798 aa		13.61	□□□□□ -0.23
ILF3-208	ENST00000587928	KRT24	Q2M2I5	525 aa		13.6	□□□□□ -0.23
ILF3-208	ENST00000587928	NWD2	Q9ULI1	1742 aa		13.6	□□□□□ -0.23
ILF3-208	ENST00000587928	RGS3	P49796	1198 aa		13.6	□□□□□ -0.23
ILF3-208	ENST00000587928	CEBPA	P49715	358 aa	Predicted RBP	13.6	□□□□□ -0.23
ILF3-208	ENST00000587928	PTMS	P20962	102 aa		13.59	□□□□□ -0.23
ILF3-208	ENST00000587928	MAP3K5	Q99683	1374 aa		13.59	□□□□□ -0.23
ILF3-208	ENST00000587928	ECM29	Q5VYK3	1845 aa		13.59	□□□□□ -0.23
ILF3-208	ENST00000587928	NPHP4	O75161	1426 aa	Predicted RBP	13.59	□□□□□ -0.23
ILF3-208	ENST00000587928	LMOD3	Q0VAK6	560 aa		13.59	□□□□□ -0.23
ILF3-208	ENST00000587928	JCAD	Q9P266	1359 aa		13.59	□□□□□ -0.23
ILF3-208	ENST00000587928	KCNA6	P17658	529 aa		13.59	□□□□□ -0.23
ILF3-208	ENST00000587928	DCTN1	Q14203	1278 aa		13.58	□□□□□ -0.24
ILF3-208	ENST00000587928	LRP6	O75581	1613 aa		13.58	□□□□□ -0.24
ILF3-208	ENST00000587928	USP42	Q9H9J4	1324 aa	Known RBP	13.58	□□□□□ -0.24
ILF3-208	ENST00000587928	C1orf167	Q5SNV9	1468 aa		13.58	□□□□□ -0.24
ILF3-208	ENST00000587928	FRAT2	O75474	233 aa	Predicted RBP	13.58	□□□□□ -0.24
ILF3-208	ENST00000587928	NRAP	Q86VF7	1730 aa		13.58	□□□□□ -0.24
ILF3-208	ENST00000587928	LRP5	O75197	1615 aa		13.58	□□□□□ -0.24
ILF3-208	ENST00000587928	LRP10	Q7Z4F1	713 aa		13.58	□□□□□ -0.24
ILF3-208	ENST00000587928	KDM6A	O15550	1401 aa	Predicted RBP	13.58	□□□□□ -0.24
ILF3-208	ENST00000587928	COL16A1	Q07092	1604 aa	Predicted RBP	13.57	□□□□□ -0.24
ILF3-208	ENST00000587928	FTSJ3	Q8IY81	847 aa	Known RBP	13.57	□□□□□ -0.24
ILF3-208	ENST00000587928	ROBO1	Q9Y6N7	1651 aa		13.57	□□□□□ -0.24
ILF3-208	ENST00000587928	IPO8	O15397	1037 aa	Known RBP	13.57	□□□□□ -0.24
ILF3-208	ENST00000587928	FOXO3	O43524	673 aa		13.57	□□□□□ -0.24
ILF3-208	ENST00000587928	IL17RE	Q8NFR9	667 aa		13.57	□□□□□ -0.24
ILF3-208	ENST00000587928	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.56	□□□□□ -0.24
ILF3-208	ENST00000587928	COL15A1	P39059	1388 aa		13.56	□□□□□ -0.24
ILF3-208	ENST00000587928	IPO4	Q8TEX9	1081 aa	Known RBP	13.56	□□□□□ -0.24
ILF3-208	ENST00000587928	DOCK2	Q92608	1830 aa		13.56	□□□□□ -0.24
ILF3-208	ENST00000587928	SULT6B1	Q6IMI4	303 aa		13.55	□□□□□ -0.24
ILF3-208	ENST00000587928	TBC1D9	Q6ZT07	1266 aa		13.55	□□□□□ -0.24
ILF3-208	ENST00000587928	ADCY9	O60503	1353 aa		13.55	□□□□□ -0.24
ILF3-208	ENST00000587928	TCHH	Q07283	1943 aa		13.55	□□□□□ -0.24
ILF3-208	ENST00000587928	MYH7	P12883	1935 aa		13.55	□□□□□ -0.24
ILF3-208	ENST00000587928	POLA2	Q14181	598 aa		13.55	□□□□□ -0.24
ILF3-208	ENST00000587928	UTY	O14607	1347 aa		13.55	□□□□□ -0.24
ILF3-208	ENST00000587928	TTC22	Q5TAA0	569 aa		13.54	□□□□□ -0.24
ILF3-208	ENST00000587928	ITPRIP	Q8IWB1	547 aa		13.54	□□□□□ -0.24
ILF3-208	ENST00000587928	G2E3	Q7L622	706 aa		13.54	□□□□□ -0.24
ILF3-208	ENST00000587928	STAP2	Q9UGK3	403 aa		13.54	□□□□□ -0.24
ILF3-208	ENST00000587928	TAF3	Q5VWG9	929 aa		13.53	□□□□□ -0.24
ILF3-208	ENST00000587928	C22orf23	Q9BZE7	217 aa		13.53	□□□□□ -0.24
ILF3-208	ENST00000587928	MCM10	Q7L590	875 aa		13.53	□□□□□ -0.24
ILF3-208	ENST00000587928	API5	Q9BZZ5	524 aa	Known RBP	13.53	□□□□□ -0.24
ILF3-208	ENST00000587928	MYH3	P11055	1940 aa		13.52	□□□□□ -0.24
ILF3-208	ENST00000587928	MEGF6	O75095	1541 aa		13.52	□□□□□ -0.24
ILF3-208	ENST00000587928	UPF2	Q9HAU5	1272 aa	Known RBP	13.52	□□□□□ -0.24
ILF3-208	ENST00000587928	RAB3GAP1	Q15042	981 aa		13.52	□□□□□ -0.25
ILF3-208	ENST00000587928	SLC26A8	Q96RN1	970 aa		13.51	□□□□□ -0.25
ILF3-208	ENST00000587928	TNS2	Q63HR2	1409 aa		13.51	□□□□□ -0.25
ILF3-208	ENST00000587928	COL5A3	P25940	1745 aa	Predicted RBP	13.51	□□□□□ -0.25
ILF3-208	ENST00000587928	RPAP2	Q8IXW5	612 aa	Predicted RBP	13.51	□□□□□ -0.25
ILF3-208	ENST00000587928	THEMIS	Q8N1K5	641 aa	Predicted RBP	13.51	□□□□□ -0.25
ILF3-208	ENST00000587928	USP26	Q9BXU7	913 aa		13.51	□□□□□ -0.25
ILF3-208	ENST00000587928	CLCN1	P35523	988 aa		13.5	□□□□□ -0.25
ILF3-208	ENST00000587928	SNRK	Q9NRH2	765 aa		13.5	□□□□□ -0.25
ILF3-208	ENST00000587928	BCOR	Q6W2J9	1755 aa		13.5	□□□□□ -0.25
ILF3-208	ENST00000587928	OTUD7A	Q8TE49	926 aa	Predicted RBP	13.5	□□□□□ -0.25
ILF3-208	ENST00000587928	IP6K1	Q92551	441 aa		13.5	□□□□□ -0.25
ILF3-208	ENST00000587928	GOLGA6L3	A6NEY3	463 aa		13.5	□□□□□ -0.25
ILF3-208	ENST00000587928	MEIS3	Q99687	375 aa		13.5	□□□□□ -0.25
ILF3-208	ENST00000587928	AKAP11	Q9UKA4	1901 aa		13.5	□□□□□ -0.25
ILF3-208	ENST00000587928	HOXB7	P09629	217 aa		13.5	□□□□□ -0.25
ILF3-208	ENST00000587928	AOX1	Q06278	1338 aa		13.49	□□□□□ -0.25
ILF3-208	ENST00000587928	DNTTIP2	Q5QJE6	756 aa	Known RBP	13.49	□□□□□ -0.25
ILF3-208	ENST00000587928	MTX1	Q13505	466 aa		13.49	□□□□□ -0.25
ILF3-208	ENST00000587928	CHMP4B	Q9H444	224 aa	Known RBP	13.49	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 137.4 ms