RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 RGPD5Q99666 1765 aa7.59□□□□□ -1.19
SDF2-206ENST00000587788 NGEFQ8N5V2 710 aa7.59□□□□□ -1.19
SDF2-206ENST00000587788 TTC13Q8NBP0 860 aa7.59□□□□□ -1.19
SDF2-206ENST00000587788 ZDHHC16Q969W1 377 aa7.59□□□□□ -1.19
SDF2-206ENST00000587788 TERF2IPQ9NYB0 399 aa7.59□□□□□ -1.19
SDF2-206ENST00000587788 SBNO1A3KN83 1393 aa7.59□□□□□ -1.2
SDF2-206ENST00000587788 POLR3AO14802 1390 aaPredicted RBP7.59□□□□□ -1.2
SDF2-206ENST00000587788 SRPK2P78362 688 aaKnown RBP7.58□□□□□ -1.2
SDF2-206ENST00000587788 C6orf132Q5T0Z8 1188 aa7.58□□□□□ -1.2
SDF2-206ENST00000587788 POTEAQ6S8J7 498 aa7.58□□□□□ -1.2
SDF2-206ENST00000587788 ZNF454Q8N9F8 522 aa7.58□□□□□ -1.2
SDF2-206ENST00000587788 RBM27Q9P2N5 1060 aaKnown RBP7.58□□□□□ -1.2
SDF2-206ENST00000587788 DAXXQ9UER7 740 aaPredicted RBP7.58□□□□□ -1.2
SDF2-206ENST00000587788 USP54Q70EL1 1684 aa7.57□□□□□ -1.2
SDF2-206ENST00000587788 ACEP12821 1306 aa7.57□□□□□ -1.2
SDF2-206ENST00000587788 COL14A1Q05707 1796 aaKnown RBP7.57□□□□□ -1.2
SDF2-206ENST00000587788 ADAMTS2O95450 1211 aa7.57□□□□□ -1.2
SDF2-206ENST00000587788 PSME1Q06323 249 aa7.57□□□□□ -1.2
SDF2-206ENST00000587788 MEX3CQ5U5Q3 659 aaKnown RBP7.57□□□□□ -1.2
SDF2-206ENST00000587788 CABLES1Q8TDN4 633 aa7.57□□□□□ -1.2
SDF2-206ENST00000587788 TMUB1Q9BVT8 246 aa7.57□□□□□ -1.2
SDF2-206ENST00000587788 ADAM33Q9BZ11 813 aa7.57□□□□□ -1.2
SDF2-206ENST00000587788 BLMP54132 1417 aaPredicted RBP7.57□□□□□ -1.2
SDF2-206ENST00000587788 NINLQ9Y2I6 1382 aa7.57□□□□□ -1.2
SDF2-206ENST00000587788 BRWD3Q6RI45 1802 aa7.57□□□□□ -1.2
SDF2-206ENST00000587788 LTN1O94822 1766 aa7.56□□□□□ -1.2
SDF2-206ENST00000587788 CD163L1Q9NR16 1453 aa7.56□□□□□ -1.2
SDF2-206ENST00000587788 CNGB1Q14028 1251 aaPredicted RBP7.56□□□□□ -1.2
SDF2-206ENST00000587788 CC2D1BQ5T0F9 858 aaKnown RBP7.56□□□□□ -1.2
SDF2-206ENST00000587788 HDGFL2Q7Z4V5 671 aaPredicted RBP7.56□□□□□ -1.2
SDF2-206ENST00000587788 NGDNQ8NEJ9 315 aaKnown RBP7.56□□□□□ -1.2
SDF2-206ENST00000587788 SLC12A5Q9H2X9 1139 aa7.56□□□□□ -1.2
SDF2-206ENST00000587788 KIF20BQ96Q89 1820 aa7.56□□□□□ -1.2
SDF2-206ENST00000587788 ATAD2Q6PL18 1390 aa7.56□□□□□ -1.2
SDF2-206ENST00000587788 AFF2P51816 1311 aa7.55□□□□□ -1.2
SDF2-206ENST00000587788 GLI3P10071 1580 aa7.55□□□□□ -1.2
SDF2-206ENST00000587788 USP6P35125 1406 aa7.55□□□□□ -1.2
SDF2-206ENST00000587788 SSH2Q76I76 1423 aa7.55□□□□□ -1.2
SDF2-206ENST00000587788 LMO7Q8WWI1 1683 aa7.55□□□□□ -1.2
SDF2-206ENST00000587788 PLEKHG3A1L390 1219 aa7.55□□□□□ -1.2
SDF2-206ENST00000587788 PPP2R1AP30153 589 aa7.55□□□□□ -1.2
SDF2-206ENST00000587788 WDR43Q15061 677 aaKnown RBP eCLIP7.55□□□□□ -1.2
SDF2-206ENST00000587788 C8orf37Q96NL8 207 aa7.55□□□□□ -1.2
SDF2-206ENST00000587788 FAM117AQ9C073 453 aa7.55□□□□□ -1.2
SDF2-206ENST00000587788 LHX6Q9UPM6 363 aa7.55□□□□□ -1.2
SDF2-206ENST00000587788 COL18A1P39060 1754 aa7.55□□□□□ -1.2
SDF2-206ENST00000587788 ARHGEF10O15013 1369 aa7.55□□□□□ -1.2
SDF2-206ENST00000587788 CPSF1Q10570 1443 aaKnown RBP7.54□□□□□ -1.2
SDF2-206ENST00000587788 SLIT2O94813 1529 aa7.54□□□□□ -1.2
SDF2-206ENST00000587788 PSDA5PKW4 1024 aaPredicted RBP7.54□□□□□ -1.2
SDF2-206ENST00000587788 HOXB1P14653 301 aaPredicted RBP7.54□□□□□ -1.2
SDF2-206ENST00000587788 ZNF710Q8N1W2 664 aa7.54□□□□□ -1.2
SDF2-206ENST00000587788 PHOX2BQ99453 314 aa7.54□□□□□ -1.2
SDF2-206ENST00000587788 CABP1Q9NZU7 370 aa7.54□□□□□ -1.2
SDF2-206ENST00000587788 RCAN3Q9UKA8 241 aa7.54□□□□□ -1.2
SDF2-206ENST00000587788 BCL9LQ86UU0 1499 aa7.54□□□□□ -1.2
SDF2-206ENST00000587788 SLIT3O75094 1523 aa7.53□□□□□ -1.2
SDF2-206ENST00000587788 WNK3Q9BYP7 1800 aa7.53□□□□□ -1.2
SDF2-206ENST00000587788 SNPHO15079 494 aa7.53□□□□□ -1.2
SDF2-206ENST00000587788 IRX6P78412 446 aaPredicted RBP7.53□□□□□ -1.2
SDF2-206ENST00000587788 NUTM2GQ5VZR2 741 aa7.53□□□□□ -1.2
SDF2-206ENST00000587788 PADI6Q6TGC4 694 aa7.53□□□□□ -1.2
SDF2-206ENST00000587788 ERICH6Q7L0X2 663 aa7.53□□□□□ -1.2
SDF2-206ENST00000587788 IL27Q8NEV9 243 aa7.53□□□□□ -1.2
SDF2-206ENST00000587788 DDRGK1Q96HY6 314 aa7.53□□□□□ -1.2
SDF2-206ENST00000587788 REPIN1Q9BWE0 567 aaKnown RBP7.53□□□□□ -1.2
SDF2-206ENST00000587788 CARD14Q9BXL6 1004 aa7.53□□□□□ -1.2
SDF2-206ENST00000587788 BCL2L12Q9HB09 334 aa7.53□□□□□ -1.2
SDF2-206ENST00000587788 RBM19Q9Y4C8 960 aaKnown RBP7.53□□□□□ -1.2
SDF2-206ENST00000587788 ADGRG1Q9Y653 693 aa7.53□□□□□ -1.2
SDF2-206ENST00000587788 CGNL1Q0VF96 1302 aa7.52□□□□□ -1.2
SDF2-206ENST00000587788 PPP4R3BQ5MIZ7 849 aa7.52□□□□□ -1.21
SDF2-206ENST00000587788 GIGYF2Q6Y7W6 1299 aaKnown RBP7.52□□□□□ -1.21
SDF2-206ENST00000587788 METTL3Q86U44 580 aaKnown RBP7.52□□□□□ -1.21
SDF2-206ENST00000587788 FNBP4Q8N3X1 1017 aaPredicted RBP7.52□□□□□ -1.21
SDF2-206ENST00000587788 OTUD5Q96G74 571 aa7.52□□□□□ -1.21
SDF2-206ENST00000587788 NGLY1Q96IV0 654 aa7.52□□□□□ -1.21
SDF2-206ENST00000587788 RGS12O14924 1447 aa7.52□□□□□ -1.21
SDF2-206ENST00000587788 ATRNO75882 1429 aa7.52□□□□□ -1.21
SDF2-206ENST00000587788 A0A1W2PP64 1363 aa7.51□□□□□ -1.21
SDF2-206ENST00000587788 NSD2O96028 1365 aa7.51□□□□□ -1.21
SDF2-206ENST00000587788 RRP1P56182 461 aaKnown RBP7.51□□□□□ -1.21
SDF2-206ENST00000587788 TTLL12Q14166 644 aaPredicted RBP7.51□□□□□ -1.21
SDF2-206ENST00000587788 ZNF772Q68DY9 489 aaPredicted RBP7.51□□□□□ -1.21
SDF2-206ENST00000587788 PXYLP1Q8TE99 480 aa7.51□□□□□ -1.21
SDF2-206ENST00000587788 CCDC136Q96JN2 1154 aa7.51□□□□□ -1.21
SDF2-206ENST00000587788 USP21Q9UK80 565 aa7.51□□□□□ -1.21
SDF2-206ENST00000587788 ANKRD26Q9UPS8 1709 aa7.51□□□□□ -1.21
SDF2-206ENST00000587788 NFAT5O94916 1531 aa7.51□□□□□ -1.21
SDF2-206ENST00000587788 RGPD2P0DJD1 1756 aa7.51□□□□□ -1.21
SDF2-206ENST00000587788 USP19O94966 1318 aa7.51□□□□□ -1.21
SDF2-206ENST00000587788 CAMTA1Q9Y6Y1 1673 aa7.51□□□□□ -1.21
SDF2-206ENST00000587788 ANKRD36BQ8N2N9 1353 aa7.5□□□□□ -1.21
SDF2-206ENST00000587788 MS4A1P11836 297 aa7.5□□□□□ -1.21
SDF2-206ENST00000587788 CLCN1P35523 988 aa7.5□□□□□ -1.21
SDF2-206ENST00000587788 PRSS12P56730 875 aa7.5□□□□□ -1.21
SDF2-206ENST00000587788 MORC1Q86VD1 984 aa7.5□□□□□ -1.21
SDF2-206ENST00000587788 ADAMTS8Q9UP79 889 aa7.5□□□□□ -1.21
SDF2-206ENST00000587788 TTC21BQ7Z4L5 1316 aa7.5□□□□□ -1.21
SDF2-206ENST00000587788 FANCIQ9NVI1 1328 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms