RNA–Protein interactions for RNA: ENST00000587760.5

NFIX-209, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-209ENST00000587760 SLC4A2P04920 1241 aa21.45■■□□□ 1.02
NFIX-209ENST00000587760 PHKG2P15735 406 aa21.45■■□□□ 1.02
NFIX-209ENST00000587760 EVA1CP58658 441 aa21.45■■□□□ 1.02
NFIX-209ENST00000587760 DCAF5Q96JK2 942 aa21.45■■□□□ 1.02
NFIX-209ENST00000587760 VIRMAQ69YN4 1812 aaKnown RBP21.44■■□□□ 1.02
NFIX-209ENST00000587760 EIF4A1P60842 406 aaKnown RBP21.44■■□□□ 1.02
NFIX-209ENST00000587760 HDAC1Q13547 482 aaPredicted RBP21.44■■□□□ 1.02
NFIX-209ENST00000587760 INTS3Q68E01 1043 aaKnown RBP21.44■■□□□ 1.02
NFIX-209ENST00000587760 COL14A1Q05707 1796 aaKnown RBP21.43■■□□□ 1.02
NFIX-209ENST00000587760 PCDHB15Q9Y5E8 787 aa21.43■■□□□ 1.02
NFIX-209ENST00000587760 SIPA1L3O60292 1781 aaPredicted RBP21.43■■□□□ 1.02
NFIX-209ENST00000587760 SCN11AQ9UI33 1791 aa21.43■■□□□ 1.02
NFIX-209ENST00000587760 ZBTB7BO15156 539 aaPredicted RBP21.41■■□□□ 1.02
NFIX-209ENST00000587760 IGHDP01880 384 aa21.41■■□□□ 1.02
NFIX-209ENST00000587760 PCDH11XQ9BZA7 1347 aa21.41■■□□□ 1.02
NFIX-209ENST00000587760 PCDH11YQ9BZA8 1340 aa21.41■■□□□ 1.02
NFIX-209ENST00000587760 IL2RBP14784 551 aa21.4■■□□□ 1.02
NFIX-209ENST00000587760 HDGFL1Q5TGJ6 251 aa21.4■■□□□ 1.02
NFIX-209ENST00000587760 CCT4P50991 539 aaKnown RBP21.39■■□□□ 1.02
NFIX-209ENST00000587760 SLC52A2Q9HAB3 445 aa21.39■■□□□ 1.02
NFIX-209ENST00000587760 MRC1P22897 1456 aa21.39■■□□□ 1.02
NFIX-209ENST00000587760 PHLPP1O60346 1717 aa21.39■■□□□ 1.01
NFIX-209ENST00000587760 ZCRB1Q8TBF4 217 aaKnown RBP21.39■■□□□ 1.01
NFIX-209ENST00000587760 RGS12O14924 1447 aa21.39■■□□□ 1.01
NFIX-209ENST00000587760 KDM6AO15550 1401 aaPredicted RBP21.38■■□□□ 1.01
NFIX-209ENST00000587760 HEG1Q9ULI3 1381 aa21.37■■□□□ 1.01
NFIX-209ENST00000587760 FLIIQ13045 1269 aa21.37■■□□□ 1.01
NFIX-209ENST00000587760 COL16A1Q07092 1604 aaPredicted RBP21.36■■□□□ 1.01
NFIX-209ENST00000587760 AEBP2Q6ZN18 517 aaPredicted RBP21.36■■□□□ 1.01
NFIX-209ENST00000587760 STRN4Q9NRL3 753 aa21.36■■□□□ 1.01
NFIX-209ENST00000587760 RBM19Q9Y4C8 960 aaKnown RBP21.36■■□□□ 1.01
NFIX-209ENST00000587760 CYP27B1O15528 508 aa21.35■■□□□ 1.01
NFIX-209ENST00000587760 PXDNLA1KZ92 1463 aa21.35■■□□□ 1.01
NFIX-209ENST00000587760 LARP1Q6PKG0 1096 aaKnown RBP21.34■■□□□ 1.01
NFIX-209ENST00000587760 BTG4Q9NY30 223 aa21.33■■□□□ 1.01
NFIX-209ENST00000587760 ERVV-2B6SEH9 535 aa21.32■■□□□ 1
NFIX-209ENST00000587760 GIGYF1O75420 1035 aaPredicted RBP21.32■■□□□ 1
NFIX-209ENST00000587760 CABP4P57796 275 aa21.32■■□□□ 1
NFIX-209ENST00000587760 FKBP5Q13451 457 aaPredicted RBP21.32■■□□□ 1
NFIX-209ENST00000587760 NKX1-1Q15270 411 aaPredicted RBP21.32■■□□□ 1
NFIX-209ENST00000587760 ZNF790Q6PG37 636 aa21.32■■□□□ 1
NFIX-209ENST00000587760 DBF4Q9UBU7 674 aaPredicted RBP21.32■■□□□ 1
NFIX-209ENST00000587760 SMC5Q8IY18 1101 aa21.32■■□□□ 1
NFIX-209ENST00000587760 TTC5Q8N0Z6 440 aa21.31■■□□□ 1
NFIX-209ENST00000587760 GCC1Q96CN9 775 aa21.31■■□□□ 1
NFIX-209ENST00000587760 EIF2S2P20042 333 aaKnown RBP21.3■■□□□ 1
NFIX-209ENST00000587760 G2E3Q7L622 706 aa21.3■■□□□ 1
NFIX-209ENST00000587760 NFATC2IPQ8NCF5 419 aa21.3■■□□□ 1
NFIX-209ENST00000587760 N4BP2Q86UW6 1770 aaPredicted RBP21.3■■□□□ 1
NFIX-209ENST00000587760 KCNQ3O43525 872 aa21.29■■□□□ 1
NFIX-209ENST00000587760 RPAP2Q8IXW5 612 aaPredicted RBP21.29■■□□□ 1
NFIX-209ENST00000587760 CDCA7Q9BWT1 371 aaPredicted RBP21.28■■□□□ 1
NFIX-209ENST00000587760 HYPKQ9NX55 129 aa21.28■■□□□ 1
NFIX-209ENST00000587760 PLCH1Q4KWH8 1693 aa21.28■■□□□ 1
NFIX-209ENST00000587760 GNAI3P08754 354 aa21.27■■□□□ 1
NFIX-209ENST00000587760 NECTIN2Q92692 538 aa21.27■■□□□ 1
NFIX-209ENST00000587760 FMNL2Q96PY5 1086 aa21.27■■□□□ 1
NFIX-209ENST00000587760 PDZRN3Q9UPQ7 1066 aa21.27■■□□□ 1
NFIX-209ENST00000587760 UBAP1LF5GYI3 381 aa21.26■□□□□ 0.99
NFIX-209ENST00000587760 PDE4AP27815 886 aa21.26■□□□□ 0.99
NFIX-209ENST00000587760 SLC4A10Q6U841 1118 aa21.26■□□□□ 0.99
NFIX-209ENST00000587760 CHPF2Q9P2E5 772 aa21.26■□□□□ 0.99
NFIX-209ENST00000587760 SNRPA1P09661 255 aaKnown RBP21.26■□□□□ 0.99
NFIX-209ENST00000587760 RGS3P49796 1198 aa21.26■□□□□ 0.99
NFIX-209ENST00000587760 PIP4K2BP78356 416 aa21.26■□□□□ 0.99
NFIX-209ENST00000587760 BACH2Q9BYV9 841 aa21.25■□□□□ 0.99
NFIX-209ENST00000587760 DDX21Q9NR30 783 aaKnown RBP eCLIP21.25■□□□□ 0.99
NFIX-209ENST00000587760 THRAP3Q9Y2W1 955 aaKnown RBP21.25■□□□□ 0.99
NFIX-209ENST00000587760 DISP2A7MBM2 1401 aa21.25■□□□□ 0.99
NFIX-209ENST00000587760 F6X3S4 739 aa21.24■□□□□ 0.99
NFIX-209ENST00000587760 HMMRO75330 724 aa21.24■□□□□ 0.99
NFIX-209ENST00000587760 DDX58O95786 925 aaKnown RBP21.24■□□□□ 0.99
NFIX-209ENST00000587760 FAM161AQ3B820 660 aa21.24■□□□□ 0.99
NFIX-209ENST00000587760 ANKRD44Q8N8A2 993 aa21.24■□□□□ 0.99
NFIX-209ENST00000587760 SHANK3Q9BYB0 1731 aa21.23■□□□□ 0.99
NFIX-209ENST00000587760 NWD2Q9ULI1 1742 aa21.22■□□□□ 0.99
NFIX-209ENST00000587760 ATP10DQ9P241 1426 aa21.22■□□□□ 0.99
NFIX-209ENST00000587760 GNAI2P04899 355 aa21.22■□□□□ 0.99
NFIX-209ENST00000587760 DDX54Q8TDD1 881 aaKnown RBP21.21■□□□□ 0.99
NFIX-209ENST00000587760 DNAAF4Q8WXU2 420 aa21.21■□□□□ 0.99
NFIX-209ENST00000587760 PHAXQ9H814 394 aaKnown RBP21.21■□□□□ 0.99
NFIX-209ENST00000587760 HDAC5Q9UQL6 1122 aa21.21■□□□□ 0.99
NFIX-209ENST00000587760 ERBB4Q15303 1308 aa21.21■□□□□ 0.99
NFIX-209ENST00000587760 NUCB1Q02818 461 aa21.2■□□□□ 0.98
NFIX-209ENST00000587760 SLC39A6Q13433 755 aa21.2■□□□□ 0.98
NFIX-209ENST00000587760 ZNF496Q96IT1 587 aaPredicted RBP21.2■□□□□ 0.98
NFIX-209ENST00000587760 MEIS3Q99687 375 aa21.2■□□□□ 0.98
NFIX-209ENST00000587760 SRCIN1Q9C0H9 1055 aa21.2■□□□□ 0.98
NFIX-209ENST00000587760 C1orf115Q9H7X2 142 aa21.2■□□□□ 0.98
NFIX-209ENST00000587760 JCADQ9P266 1359 aa21.2■□□□□ 0.98
NFIX-209ENST00000587760 USP35Q9P2H5 1018 aa21.2■□□□□ 0.98
NFIX-209ENST00000587760 NRAPQ86VF7 1730 aa21.19■□□□□ 0.98
NFIX-209ENST00000587760 LRP6O75581 1613 aa21.19■□□□□ 0.98
NFIX-209ENST00000587760 ADAMTS2O95450 1211 aa21.19■□□□□ 0.98
NFIX-209ENST00000587760 CEP85Q6P2H3 762 aa21.19■□□□□ 0.98
NFIX-209ENST00000587760 ZBTB47Q9UFB7 747 aaPredicted RBP21.19■□□□□ 0.98
NFIX-209ENST00000587760 WNK3Q9BYP7 1800 aa21.18■□□□□ 0.98
NFIX-209ENST00000587760 IBTKQ9P2D0 1353 aaPredicted RBP21.18■□□□□ 0.98
NFIX-209ENST00000587760 PAPPAQ13219 1627 aa21.18■□□□□ 0.98
NFIX-209ENST00000587760 LAMB4A4D0S4 1761 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms