RNA–Protein interactions for RNA: ENST00000587537.5

CLPTM1-207, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-207ENST00000587537 CABP4P57796 275 aa13.42□□□□□ -0.26
CLPTM1-207ENST00000587537 KDM3BQ7LBC6 1761 aa13.41□□□□□ -0.26
CLPTM1-207ENST00000587537 DOT1LQ8TEK3 1739 aa13.4□□□□□ -0.26
CLPTM1-207ENST00000587537 HOXB7P09629 217 aa13.4□□□□□ -0.26
CLPTM1-207ENST00000587537 DCTN1Q14203 1278 aa13.4□□□□□ -0.26
CLPTM1-207ENST00000587537 DUSP27Q5VZP5 1158 aa13.4□□□□□ -0.26
CLPTM1-207ENST00000587537 FAM196AQ6ZSG2 479 aa13.4□□□□□ -0.26
CLPTM1-207ENST00000587537 KRT27Q7Z3Y8 459 aa13.4□□□□□ -0.26
CLPTM1-207ENST00000587537 MARCH10Q8NA82 808 aaPredicted RBP13.4□□□□□ -0.26
CLPTM1-207ENST00000587537 LGR6Q9HBX8 967 aa13.4□□□□□ -0.26
CLPTM1-207ENST00000587537 TMOD3Q9NYL9 352 aa13.4□□□□□ -0.26
CLPTM1-207ENST00000587537 TSPYL4Q9UJ04 414 aa13.4□□□□□ -0.26
CLPTM1-207ENST00000587537 ITGB4P16144 1822 aa13.4□□□□□ -0.26
CLPTM1-207ENST00000587537 FANCIQ9NVI1 1328 aa13.39□□□□□ -0.27
CLPTM1-207ENST00000587537 TOGARAM1Q9Y4F4 1720 aa13.39□□□□□ -0.27
CLPTM1-207ENST00000587537 BTBD11A6QL63 1104 aa13.39□□□□□ -0.27
CLPTM1-207ENST00000587537 RGS17Q9UGC6 210 aaPredicted RBP13.39□□□□□ -0.27
CLPTM1-207ENST00000587537 PAPPAQ13219 1627 aa13.39□□□□□ -0.27
CLPTM1-207ENST00000587537 NHSQ6T4R5 1651 aa13.38□□□□□ -0.27
CLPTM1-207ENST00000587537 TTC5Q8N0Z6 440 aa13.38□□□□□ -0.27
CLPTM1-207ENST00000587537 NFATC2IPQ8NCF5 419 aa13.38□□□□□ -0.27
CLPTM1-207ENST00000587537 THUMPD2Q9BTF0 503 aaKnown RBP13.38□□□□□ -0.27
CLPTM1-207ENST00000587537 MBIPQ9NS73 344 aa13.38□□□□□ -0.27
CLPTM1-207ENST00000587537 BRWD3Q6RI45 1802 aa13.38□□□□□ -0.27
CLPTM1-207ENST00000587537 SMARCC1Q92922 1105 aaPredicted RBP13.37□□□□□ -0.27
CLPTM1-207ENST00000587537 LAS1LQ9Y4W2 734 aaKnown RBP13.37□□□□□ -0.27
CLPTM1-207ENST00000587537 UBR2Q8IWV8 1755 aa13.36□□□□□ -0.27
CLPTM1-207ENST00000587537 ZNF790Q6PG37 636 aa13.36□□□□□ -0.27
CLPTM1-207ENST00000587537 POTEAQ6S8J7 498 aa13.36□□□□□ -0.27
CLPTM1-207ENST00000587537 CDCA7LQ96GN5 454 aa13.36□□□□□ -0.27
CLPTM1-207ENST00000587537 RGS12O14924 1447 aa13.36□□□□□ -0.27
CLPTM1-207ENST00000587537 KAT6BQ8WYB5 2073 aa13.36□□□□□ -0.27
CLPTM1-207ENST00000587537 SBF2Q86WG5 1849 aa13.36□□□□□ -0.27
CLPTM1-207ENST00000587537 ZNF831Q5JPB2 1677 aa13.35□□□□□ -0.27
CLPTM1-207ENST00000587537 CACNA1FO60840 1977 aa13.35□□□□□ -0.27
CLPTM1-207ENST00000587537 VSIG10Q8N0Z9 540 aa13.35□□□□□ -0.27
CLPTM1-207ENST00000587537 FMNL2Q96PY5 1086 aa13.35□□□□□ -0.27
CLPTM1-207ENST00000587537 TEX13AQ9BXU3 409 aaPredicted RBP13.35□□□□□ -0.27
CLPTM1-207ENST00000587537 SPINK5Q9NQ38 1064 aaPredicted RBP13.35□□□□□ -0.27
CLPTM1-207ENST00000587537 SENP3-EIF4A1A0A087X0R7 540 aa13.34□□□□□ -0.27
CLPTM1-207ENST00000587537 CICQ96RK0 1608 aaPredicted RBP13.34□□□□□ -0.27
CLPTM1-207ENST00000587537 HEG1Q9ULI3 1381 aa13.33□□□□□ -0.27
CLPTM1-207ENST00000587537 PRIM1P49642 420 aaKnown RBP13.33□□□□□ -0.28
CLPTM1-207ENST00000587537 EIF4A1P60842 406 aaKnown RBP13.33□□□□□ -0.28
CLPTM1-207ENST00000587537 ALDH1L2Q3SY69 923 aa13.33□□□□□ -0.28
CLPTM1-207ENST00000587537 PIGBQ92521 554 aa13.33□□□□□ -0.28
CLPTM1-207ENST00000587537 TSR2Q969E8 191 aaKnown RBP13.33□□□□□ -0.28
CLPTM1-207ENST00000587537 BCL11BQ9C0K0 894 aaPredicted RBP13.33□□□□□ -0.28
CLPTM1-207ENST00000587537 EXOSC9Q06265 439 aaKnown RBP13.32□□□□□ -0.28
CLPTM1-207ENST00000587537 TWISTNBQ3B726 338 aaPredicted RBP13.32□□□□□ -0.28
CLPTM1-207ENST00000587537 SYTL4Q96C24 671 aaPredicted RBP13.32□□□□□ -0.28
CLPTM1-207ENST00000587537 LAMB4A4D0S4 1761 aa13.31□□□□□ -0.28
CLPTM1-207ENST00000587537 SNRPA1P09661 255 aaKnown RBP13.31□□□□□ -0.28
CLPTM1-207ENST00000587537 ERBB4Q15303 1308 aa13.31□□□□□ -0.28
CLPTM1-207ENST00000587537 BTAF1O14981 1849 aa13.3□□□□□ -0.28
CLPTM1-207ENST00000587537 KCPQ6ZWJ8 1503 aa13.3□□□□□ -0.28
CLPTM1-207ENST00000587537 BRPF1P55201 1214 aaPredicted RBP13.3□□□□□ -0.28
CLPTM1-207ENST00000587537 CCDC30Q5VVM6 783 aa13.3□□□□□ -0.28
CLPTM1-207ENST00000587537 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.3□□□□□ -0.28
CLPTM1-207ENST00000587537 RCAN3Q9UKA8 241 aa13.3□□□□□ -0.28
CLPTM1-207ENST00000587537 RGPD3A6NKT7 1758 aaPredicted RBP13.3□□□□□ -0.28
CLPTM1-207ENST00000587537 RGPD4Q7Z3J3 1758 aa13.3□□□□□ -0.28
CLPTM1-207ENST00000587537 GIGYF1O75420 1035 aaPredicted RBP13.29□□□□□ -0.28
CLPTM1-207ENST00000587537 ATG3Q9NT62 314 aa13.29□□□□□ -0.28
CLPTM1-207ENST00000587537 MIS18AQ9NYP9 233 aa13.29□□□□□ -0.28
CLPTM1-207ENST00000587537 VAMP4O75379 141 aa13.28□□□□□ -0.28
CLPTM1-207ENST00000587537 C8orf58Q8NAV2 365 aa13.28□□□□□ -0.28
CLPTM1-207ENST00000587537 ACSBG1Q96GR2 724 aa13.28□□□□□ -0.28
CLPTM1-207ENST00000587537 ZNF496Q96IT1 587 aaPredicted RBP13.28□□□□□ -0.28
CLPTM1-207ENST00000587537 STK31Q9BXU1 1019 aa13.28□□□□□ -0.28
CLPTM1-207ENST00000587537 KIF16BQ96L93 1317 aa13.28□□□□□ -0.28
CLPTM1-207ENST00000587537 PALLDQ8WX93 1383 aa13.28□□□□□ -0.28
CLPTM1-207ENST00000587537 LY75O60449 1722 aa13.27□□□□□ -0.28
CLPTM1-207ENST00000587537 STARD3NLO95772 234 aa13.27□□□□□ -0.29
CLPTM1-207ENST00000587537 MS4A1P11836 297 aa13.27□□□□□ -0.29
CLPTM1-207ENST00000587537 SLC39A6Q13433 755 aa13.27□□□□□ -0.29
CLPTM1-207ENST00000587537 CCDC125Q86Z20 511 aa13.27□□□□□ -0.29
CLPTM1-207ENST00000587537 ASAP1Q9ULH1 1129 aa13.27□□□□□ -0.29
CLPTM1-207ENST00000587537 IPO8O15397 1037 aaKnown RBP13.26□□□□□ -0.29
CLPTM1-207ENST00000587537 RARSP54136 660 aaKnown RBP13.26□□□□□ -0.29
CLPTM1-207ENST00000587537 HDGFL1Q5TGJ6 251 aa13.26□□□□□ -0.29
CLPTM1-207ENST00000587537 DBF4Q9UBU7 674 aaPredicted RBP13.26□□□□□ -0.29
CLPTM1-207ENST00000587537 LOC102724428A0A0B4J2F2 783 aa13.25□□□□□ -0.29
CLPTM1-207ENST00000587537 PLSCR1O15162 318 aa13.25□□□□□ -0.29
CLPTM1-207ENST00000587537 KCNQ2O43526 872 aa13.25□□□□□ -0.29
CLPTM1-207ENST00000587537 SIK1P57059 783 aa13.25□□□□□ -0.29
CLPTM1-207ENST00000587537 SLC27A3Q5K4L6 730 aa13.25□□□□□ -0.29
CLPTM1-207ENST00000587537 KCNQ3O43525 872 aa13.24□□□□□ -0.29
CLPTM1-207ENST00000587537 PTCD1O75127 700 aaKnown RBP13.24□□□□□ -0.29
CLPTM1-207ENST00000587537 TSPYL6Q8N831 410 aa13.24□□□□□ -0.29
CLPTM1-207ENST00000587537 ARHGAP45Q92619 1136 aa13.24□□□□□ -0.29
CLPTM1-207ENST00000587537 RBM42Q9BTD8 480 aaKnown RBP13.24□□□□□ -0.29
CLPTM1-207ENST00000587537 SMC4Q9NTJ3 1288 aa13.24□□□□□ -0.29
CLPTM1-207ENST00000587537 HYPKQ9NX55 129 aa13.24□□□□□ -0.29
CLPTM1-207ENST00000587537 C5P01031 1676 aa13.24□□□□□ -0.29
CLPTM1-207ENST00000587537 PTPRCP08575 1304 aa13.23□□□□□ -0.29
CLPTM1-207ENST00000587537 TNS1Q9HBL0 1735 aaKnown RBP13.23□□□□□ -0.29
CLPTM1-207ENST00000587537 SF3B2Q13435 895 aaKnown RBP13.23□□□□□ -0.29
CLPTM1-207ENST00000587537 COL5A3P25940 1745 aaPredicted RBP13.22□□□□□ -0.29
CLPTM1-207ENST00000587537 TJP1Q07157 1748 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms