RNA–Protein interactions for RNA: ENST00000587062.1

VAT1-203, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-203ENST00000587062 SRCAPQ6ZRS2 3230 aa27.1■■□□□ 1.93
VAT1-203ENST00000587062 KDM6AO15550 1401 aaPredicted RBP27.09■■□□□ 1.93
VAT1-203ENST00000587062 PTGER2P43116 358 aa27.09■■□□□ 1.93
VAT1-203ENST00000587062 MTHFSDQ2M296 383 aaKnown RBP27.09■■□□□ 1.93
VAT1-203ENST00000587062 NEFMP07197 916 aa27.08■■□□□ 1.93
VAT1-203ENST00000587062 U2AF1L5P0DN76 240 aaPredicted RBP27.08■■□□□ 1.93
VAT1-203ENST00000587062 U2AF1Q01081 240 aaKnown RBP eCLIP27.08■■□□□ 1.93
VAT1-203ENST00000587062 TAF1LQ8IZX4 1826 aa27.07■■□□□ 1.92
VAT1-203ENST00000587062 ARXQ96QS3 562 aa27.07■■□□□ 1.92
VAT1-203ENST00000587062 RNMTO43148 476 aaKnown RBP27.06■■□□□ 1.92
VAT1-203ENST00000587062 DDX10Q13206 875 aaKnown RBP27.06■■□□□ 1.92
VAT1-203ENST00000587062 RALBP1Q15311 655 aa27.06■■□□□ 1.92
VAT1-203ENST00000587062 SLC52A2Q9HAB3 445 aa27.06■■□□□ 1.92
VAT1-203ENST00000587062 FCHSD2O94868 740 aa27.05■■□□□ 1.92
VAT1-203ENST00000587062 COL23A1Q86Y22 540 aaPredicted RBP27.05■■□□□ 1.92
VAT1-203ENST00000587062 C4BP0C0L5 1744 aa27.04■■□□□ 1.92
VAT1-203ENST00000587062 GNAT3A8MTJ3 354 aa27.04■■□□□ 1.92
VAT1-203ENST00000587062 SCN11AQ9UI33 1791 aa27.04■■□□□ 1.92
VAT1-203ENST00000587062 SSFA2P28290 1259 aa27.03■■□□□ 1.92
VAT1-203ENST00000587062 PRKAR2BP31323 418 aa27.03■■□□□ 1.92
VAT1-203ENST00000587062 LGR6Q9HBX8 967 aa27.03■■□□□ 1.92
VAT1-203ENST00000587062 LINC00116Q8NCU8 138 aa27.02■■□□□ 1.92
VAT1-203ENST00000587062 SGIP1Q9BQI5 828 aa27.02■■□□□ 1.92
VAT1-203ENST00000587062 PTCD1O75127 700 aaKnown RBP27.01■■□□□ 1.91
VAT1-203ENST00000587062 TEFQ10587 303 aa27.01■■□□□ 1.91
VAT1-203ENST00000587062 PNNQ9H307 717 aaKnown RBP27.01■■□□□ 1.91
VAT1-203ENST00000587062 TUBGCP6Q96RT7 1819 aa27.01■■□□□ 1.91
VAT1-203ENST00000587062 MAP3K5Q99683 1374 aa27■■□□□ 1.91
VAT1-203ENST00000587062 GNPATO15228 680 aa27■■□□□ 1.91
VAT1-203ENST00000587062 PHF14O94880 888 aa27■■□□□ 1.91
VAT1-203ENST00000587062 ITPK1Q13572 414 aa27■■□□□ 1.91
VAT1-203ENST00000587062 RC3H1Q5TC82 1133 aaKnown RBP27■■□□□ 1.91
VAT1-203ENST00000587062 RSPH6AQ9H0K4 717 aa27■■□□□ 1.91
VAT1-203ENST00000587062 RTCBQ9Y3I0 505 aaKnown RBP27■■□□□ 1.91
VAT1-203ENST00000587062 ZNF831Q5JPB2 1677 aa26.99■■□□□ 1.91
VAT1-203ENST00000587062 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.99■■□□□ 1.91
VAT1-203ENST00000587062 RTF1Q92541 710 aaKnown RBP26.98■■□□□ 1.91
VAT1-203ENST00000587062 FHDC1Q9C0D6 1143 aaPredicted RBP26.98■■□□□ 1.91
VAT1-203ENST00000587062 TTC5Q8N0Z6 440 aa26.97■■□□□ 1.91
VAT1-203ENST00000587062 TRAPPC3LQ5T215 181 aa26.96■■□□□ 1.91
VAT1-203ENST00000587062 SYT17Q9BSW7 474 aa26.96■■□□□ 1.91
VAT1-203ENST00000587062 CNTNAP4Q9C0A0 1308 aa26.94■■□□□ 1.9
VAT1-203ENST00000587062 ADRA2BP18089 450 aa26.94■■□□□ 1.9
VAT1-203ENST00000587062 KLHL34Q8N239 644 aa26.94■■□□□ 1.9
VAT1-203ENST00000587062 PHACTR3Q96KR7 559 aa26.93■■□□□ 1.9
VAT1-203ENST00000587062 SLC4A9Q96Q91 983 aa26.93■■□□□ 1.9
VAT1-203ENST00000587062 MRC1P22897 1456 aa26.93■■□□□ 1.9
VAT1-203ENST00000587062 VIRMAQ69YN4 1812 aaKnown RBP26.93■■□□□ 1.9
VAT1-203ENST00000587062 UBR3Q6ZT12 1888 aa26.92■■□□□ 1.9
VAT1-203ENST00000587062 RPS6KA4O75676 772 aa26.92■■□□□ 1.9
VAT1-203ENST00000587062 MSL1Q68DK7 614 aa26.92■■□□□ 1.9
VAT1-203ENST00000587062 HTATSF1O43719 755 aaKnown RBP26.9■■□□□ 1.9
VAT1-203ENST00000587062 RFC4P35249 363 aa26.9■■□□□ 1.9
VAT1-203ENST00000587062 SLC39A6Q13433 755 aa26.9■■□□□ 1.9
VAT1-203ENST00000587062 VSIG10Q8N0Z9 540 aa26.9■■□□□ 1.9
VAT1-203ENST00000587062 IL17REQ8NFR9 667 aa26.9■■□□□ 1.9
VAT1-203ENST00000587062 COL24A1Q17RW2 1714 aa26.9■■□□□ 1.9
VAT1-203ENST00000587062 MYBBP1AQ9BQG0 1328 aaKnown RBP26.9■■□□□ 1.9
VAT1-203ENST00000587062 ADAMTS7Q9UKP4 1686 aa26.89■■□□□ 1.9
VAT1-203ENST00000587062 CRKLP46109 303 aaKnown RBP26.88■■□□□ 1.89
VAT1-203ENST00000587062 TEX13AQ9BXU3 409 aaPredicted RBP26.87■■□□□ 1.89
VAT1-203ENST00000587062 MAPK8IP3Q9UPT6 1336 aa26.87■■□□□ 1.89
VAT1-203ENST00000587062 NLGN1Q8N2Q7 840 aa26.86■■□□□ 1.89
VAT1-203ENST00000587062 COL5A3P25940 1745 aaPredicted RBP26.85■■□□□ 1.89
VAT1-203ENST00000587062 BTBD11A6QL63 1104 aa26.85■■□□□ 1.89
VAT1-203ENST00000587062 ZNF790Q6PG37 636 aa26.85■■□□□ 1.89
VAT1-203ENST00000587062 STARD3NLO95772 234 aa26.84■■□□□ 1.89
VAT1-203ENST00000587062 AMIGO3Q86WK7 504 aa26.84■■□□□ 1.89
VAT1-203ENST00000587062 DNAJC10Q8IXB1 793 aa26.84■■□□□ 1.89
VAT1-203ENST00000587062 ARHGEF1Q92888 912 aaKnown RBP26.84■■□□□ 1.89
VAT1-203ENST00000587062 CEMIPQ8WUJ3 1361 aa26.84■■□□□ 1.89
VAT1-203ENST00000587062 SMIM5Q71RC9 77 aa26.83■■□□□ 1.89
VAT1-203ENST00000587062 CCDC87Q9NVE4 849 aa26.83■■□□□ 1.89
VAT1-203ENST00000587062 FMNL2Q96PY5 1086 aa26.82■■□□□ 1.88
VAT1-203ENST00000587062 CD2APQ9Y5K6 639 aa26.82■■□□□ 1.88
VAT1-203ENST00000587062 CICQ96RK0 1608 aaPredicted RBP26.82■■□□□ 1.88
VAT1-203ENST00000587062 GPR162Q16538 588 aa26.8■■□□□ 1.88
VAT1-203ENST00000587062 NPM2Q86SE8 214 aaKnown RBP26.8■■□□□ 1.88
VAT1-203ENST00000587062 CYP19A1P11511 503 aaPredicted RBP26.79■■□□□ 1.88
VAT1-203ENST00000587062 WDR43Q15061 677 aaKnown RBP eCLIP26.79■■□□□ 1.88
VAT1-203ENST00000587062 MCM10Q7L590 875 aa26.79■■□□□ 1.88
VAT1-203ENST00000587062 TJP1Q07157 1748 aa26.79■■□□□ 1.88
VAT1-203ENST00000587062 ZPR1O75312 459 aa26.78■■□□□ 1.88
VAT1-203ENST00000587062 INTS5Q6P9B9 1019 aaKnown RBP26.78■■□□□ 1.88
VAT1-203ENST00000587062 KCPQ6ZWJ8 1503 aa26.78■■□□□ 1.88
VAT1-203ENST00000587062 HEG1Q9ULI3 1381 aa26.77■■□□□ 1.88
VAT1-203ENST00000587062 NFE2L2Q16236 605 aa26.77■■□□□ 1.88
VAT1-203ENST00000587062 PNISRQ8TF01 805 aaKnown RBP26.77■■□□□ 1.88
VAT1-203ENST00000587062 ZNF496Q96IT1 587 aaPredicted RBP26.77■■□□□ 1.88
VAT1-203ENST00000587062 PLEKHF1Q96S99 279 aa26.77■■□□□ 1.88
VAT1-203ENST00000587062 MMP10P09238 476 aa26.76■■□□□ 1.87
VAT1-203ENST00000587062 TAF7Q15545 349 aaPredicted RBP26.76■■□□□ 1.87
VAT1-203ENST00000587062 PRKRIP1Q9H875 184 aaPredicted RBP26.76■■□□□ 1.87
VAT1-203ENST00000587062 MYH14Q7Z406 1995 aaKnown RBP26.76■■□□□ 1.87
VAT1-203ENST00000587062 PELP1Q8IZL8 1130 aaKnown RBP26.75■■□□□ 1.87
VAT1-203ENST00000587062 PARP3Q9Y6F1 533 aa26.75■■□□□ 1.87
VAT1-203ENST00000587062 SIPA1L3O60292 1781 aaPredicted RBP26.74■■□□□ 1.87
VAT1-203ENST00000587062 UBR2Q8IWV8 1755 aa26.74■■□□□ 1.87
VAT1-203ENST00000587062 A0A087WZG4 1122 aa26.74■■□□□ 1.87
VAT1-203ENST00000587062 ZNF316A6NFI3 1004 aaPredicted RBP26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms