RNA–Protein interactions for RNA: ENST00000586443.1

GRN-205, Transcript of granulin precursor, humanhuman

TSL 3

Gene GRN, Length 1,557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-205ENST00000586443 DCAF5Q96JK2 942 aa24.02■■□□□ 1.44
GRN-205ENST00000586443 API5Q9BZZ5 524 aaKnown RBP24.02■■□□□ 1.44
GRN-205ENST00000586443 CYP27B1O15528 508 aa24.01■■□□□ 1.43
GRN-205ENST00000586443 DDX19BQ9UMR2 479 aa24.01■■□□□ 1.43
GRN-205ENST00000586443 PCDH11XQ9BZA7 1347 aa24.01■■□□□ 1.43
GRN-205ENST00000586443 PCDH11YQ9BZA8 1340 aa24.01■■□□□ 1.43
GRN-205ENST00000586443 PLCH1Q4KWH8 1693 aa24.01■■□□□ 1.43
GRN-205ENST00000586443 EIF4A1P60842 406 aaKnown RBP24■■□□□ 1.43
GRN-205ENST00000586443 CHMP4AQ9BY43 222 aa24■■□□□ 1.43
GRN-205ENST00000586443 ZCRB1Q8TBF4 217 aaKnown RBP23.99■■□□□ 1.43
GRN-205ENST00000586443 ABCC4O15439 1325 aa23.99■■□□□ 1.43
GRN-205ENST00000586443 PTPRCP08575 1304 aa23.99■■□□□ 1.43
GRN-205ENST00000586443 CACNA1FO60840 1977 aa23.99■■□□□ 1.43
GRN-205ENST00000586443 TCERG1O14776 1098 aaKnown RBP23.99■■□□□ 1.43
GRN-205ENST00000586443 CCDC30Q5VVM6 783 aa23.99■■□□□ 1.43
GRN-205ENST00000586443 KDM2BQ8NHM5 1336 aa23.98■■□□□ 1.43
GRN-205ENST00000586443 TMEM57Q8N5G2 664 aa23.98■■□□□ 1.43
GRN-205ENST00000586443 CERKQ8TCT0 537 aa23.98■■□□□ 1.43
GRN-205ENST00000586443 SLC52A2Q9HAB3 445 aa23.98■■□□□ 1.43
GRN-205ENST00000586443 SHANK3Q9BYB0 1731 aa23.98■■□□□ 1.43
GRN-205ENST00000586443 CENPQQ7L2Z9 268 aaPredicted RBP23.97■■□□□ 1.43
GRN-205ENST00000586443 ITPRIPQ8IWB1 547 aa23.97■■□□□ 1.43
GRN-205ENST00000586443 NRAPQ86VF7 1730 aa23.96■■□□□ 1.43
GRN-205ENST00000586443 STK31Q9BXU1 1019 aa23.96■■□□□ 1.43
GRN-205ENST00000586443 SLC4A2P04920 1241 aa23.95■■□□□ 1.43
GRN-205ENST00000586443 CHMP4BQ9H444 224 aaKnown RBP23.95■■□□□ 1.43
GRN-205ENST00000586443 HEG1Q9ULI3 1381 aa23.95■■□□□ 1.43
GRN-205ENST00000586443 NWD2Q9ULI1 1742 aa23.95■■□□□ 1.42
GRN-205ENST00000586443 DISP2A7MBM2 1401 aa23.94■■□□□ 1.42
GRN-205ENST00000586443 RGS12O14924 1447 aa23.94■■□□□ 1.42
GRN-205ENST00000586443 JCADQ9P266 1359 aa23.94■■□□□ 1.42
GRN-205ENST00000586443 NKX1-1Q15270 411 aaPredicted RBP23.94■■□□□ 1.42
GRN-205ENST00000586443 WNK3Q9BYP7 1800 aa23.92■■□□□ 1.42
GRN-205ENST00000586443 KCNQ3O43525 872 aa23.92■■□□□ 1.42
GRN-205ENST00000586443 ADAMTS2O95450 1211 aa23.91■■□□□ 1.42
GRN-205ENST00000586443 HDGFL1Q5TGJ6 251 aa23.91■■□□□ 1.42
GRN-205ENST00000586443 SLIT2O94813 1529 aa23.9■■□□□ 1.42
GRN-205ENST00000586443 INTS3Q68E01 1043 aaKnown RBP23.9■■□□□ 1.42
GRN-205ENST00000586443 ZNF790Q6PG37 636 aa23.9■■□□□ 1.42
GRN-205ENST00000586443 NFATC2IPQ8NCF5 419 aa23.9■■□□□ 1.42
GRN-205ENST00000586443 ZBTB40Q9NUA8 1239 aa23.9■■□□□ 1.42
GRN-205ENST00000586443 ERVV-2B6SEH9 535 aa23.89■■□□□ 1.41
GRN-205ENST00000586443 GIGYF1O75420 1035 aaPredicted RBP23.88■■□□□ 1.41
GRN-205ENST00000586443 USP35Q9P2H5 1018 aa23.88■■□□□ 1.41
GRN-205ENST00000586443 PCDHB15Q9Y5E8 787 aa23.88■■□□□ 1.41
GRN-205ENST00000586443 NUTM2BA6NNL0 878 aaPredicted RBP23.87■■□□□ 1.41
GRN-205ENST00000586443 NUTM2EB1AL46 878 aaPredicted RBP23.87■■□□□ 1.41
GRN-205ENST00000586443 CABP4P57796 275 aa23.87■■□□□ 1.41
GRN-205ENST00000586443 NUTM2AQ8IVF1 878 aaPredicted RBP23.87■■□□□ 1.41
GRN-205ENST00000586443 CDCA7Q9BWT1 371 aaPredicted RBP23.87■■□□□ 1.41
GRN-205ENST00000586443 ZBTB7BO15156 539 aaPredicted RBP23.86■■□□□ 1.41
GRN-205ENST00000586443 THRAP3Q9Y2W1 955 aaKnown RBP23.86■■□□□ 1.41
GRN-205ENST00000586443 FLIIQ13045 1269 aa23.86■■□□□ 1.41
GRN-205ENST00000586443 G2E3Q7L622 706 aa23.86■■□□□ 1.41
GRN-205ENST00000586443 IGHDP01880 384 aa23.85■■□□□ 1.41
GRN-205ENST00000586443 SPATA31A1Q5TZJ5 1347 aa23.84■■□□□ 1.41
GRN-205ENST00000586443 SPATA31A6Q5VVP1 1343 aa23.84■■□□□ 1.41
GRN-205ENST00000586443 RWDD1Q9H446 243 aaPredicted RBP23.84■■□□□ 1.41
GRN-205ENST00000586443 DDX54Q8TDD1 881 aaKnown RBP23.83■■□□□ 1.41
GRN-205ENST00000586443 NECTIN2Q92692 538 aa23.83■■□□□ 1.41
GRN-205ENST00000586443 N4BP2Q86UW6 1770 aaPredicted RBP23.83■■□□□ 1.41
GRN-205ENST00000586443 PXDNLA1KZ92 1463 aa23.83■■□□□ 1.4
GRN-205ENST00000586443 LRP6O75581 1613 aa23.83■■□□□ 1.4
GRN-205ENST00000586443 PAPPAQ13219 1627 aa23.83■■□□□ 1.4
GRN-205ENST00000586443 EIF2S2P20042 333 aaKnown RBP23.82■■□□□ 1.4
GRN-205ENST00000586443 TTC5Q8N0Z6 440 aa23.82■■□□□ 1.4
GRN-205ENST00000586443 SLC39A6Q13433 755 aa23.82■■□□□ 1.4
GRN-205ENST00000586443 HDAC1Q13547 482 aaPredicted RBP23.82■■□□□ 1.4
GRN-205ENST00000586443 DBF4Q9UBU7 674 aaPredicted RBP23.82■■□□□ 1.4
GRN-205ENST00000586443 TNS2Q63HR2 1409 aa23.82■■□□□ 1.4
GRN-205ENST00000586443 TOGARAM1Q9Y4F4 1720 aa23.81■■□□□ 1.4
GRN-205ENST00000586443 CCT4P50991 539 aaKnown RBP23.81■■□□□ 1.4
GRN-205ENST00000586443 UBR2Q8IWV8 1755 aa23.81■■□□□ 1.4
GRN-205ENST00000586443 SPATA31A5Q5VU36 1347 aa23.81■■□□□ 1.4
GRN-205ENST00000586443 SPATA31A7Q8IWB4 1347 aa23.81■■□□□ 1.4
GRN-205ENST00000586443 C5P01031 1676 aa23.8■■□□□ 1.4
GRN-205ENST00000586443 FKBP5Q13451 457 aaPredicted RBP23.8■■□□□ 1.4
GRN-205ENST00000586443 FMNL2Q96PY5 1086 aa23.8■■□□□ 1.4
GRN-205ENST00000586443 CHPF2Q9P2E5 772 aa23.8■■□□□ 1.4
GRN-205ENST00000586443 GLI3P10071 1580 aa23.79■■□□□ 1.4
GRN-205ENST00000586443 EXOC5O00471 708 aa23.78■■□□□ 1.4
GRN-205ENST00000586443 ZNF496Q96IT1 587 aaPredicted RBP23.78■■□□□ 1.4
GRN-205ENST00000586443 SNRPA1P09661 255 aaKnown RBP23.78■■□□□ 1.4
GRN-205ENST00000586443 TSHZ2Q9NRE2 1034 aa23.78■■□□□ 1.4
GRN-205ENST00000586443 LAMB4A4D0S4 1761 aa23.77■■□□□ 1.4
GRN-205ENST00000586443 BARGINQ6ZT62 677 aa23.77■■□□□ 1.4
GRN-205ENST00000586443 UNC5CLQ8IV45 518 aa23.77■■□□□ 1.4
GRN-205ENST00000586443 PHAXQ9H814 394 aaKnown RBP23.76■■□□□ 1.39
GRN-205ENST00000586443 F6X3S4 739 aa23.75■■□□□ 1.39
GRN-205ENST00000586443 HYPKQ9NX55 129 aa23.75■■□□□ 1.39
GRN-205ENST00000586443 PRAMEF22A3QJZ6 481 aa23.74■■□□□ 1.39
GRN-205ENST00000586443 DDX21Q9NR30 783 aaKnown RBP eCLIP23.74■■□□□ 1.39
GRN-205ENST00000586443 BCL9LQ86UU0 1499 aa23.74■■□□□ 1.39
GRN-205ENST00000586443 KCPQ6ZWJ8 1503 aa23.74■■□□□ 1.39
GRN-205ENST00000586443 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.74■■□□□ 1.39
GRN-205ENST00000586443 SLC4A10Q6U841 1118 aa23.74■■□□□ 1.39
GRN-205ENST00000586443 FNBP4Q8N3X1 1017 aaPredicted RBP23.74■■□□□ 1.39
GRN-205ENST00000586443 TMOD3Q9NYL9 352 aa23.74■■□□□ 1.39
GRN-205ENST00000586443 NGLY1Q96IV0 654 aa23.73■■□□□ 1.39
GRN-205ENST00000586443 ITGB4P16144 1822 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms