RNA–Protein interactions for RNA: ENST00000585672.5

MBD1-212, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-212ENST00000585672 POLKQ9UBT6 870 aa17.76■□□□□ 0.43
MBD1-212ENST00000585672 TCHHQ07283 1943 aa17.76■□□□□ 0.43
MBD1-212ENST00000585672 USP27XA6NNY8 438 aa17.76■□□□□ 0.43
MBD1-212ENST00000585672 GYS2P54840 703 aa17.76■□□□□ 0.43
MBD1-212ENST00000585672 LUZP1Q86V48 1076 aa17.76■□□□□ 0.43
MBD1-212ENST00000585672 ARHGAP45Q92619 1136 aa17.76■□□□□ 0.43
MBD1-212ENST00000585672 PTPRCP08575 1304 aa17.75■□□□□ 0.43
MBD1-212ENST00000585672 NPHP1O15259 732 aa17.75■□□□□ 0.43
MBD1-212ENST00000585672 CCDC192P0DO97 292 aa17.75■□□□□ 0.43
MBD1-212ENST00000585672 GTF2A1P52655 376 aaPredicted RBP17.75■□□□□ 0.43
MBD1-212ENST00000585672 FAM200AQ8TCP9 573 aa17.75■□□□□ 0.43
MBD1-212ENST00000585672 HDAC5Q9UQL6 1122 aa17.75■□□□□ 0.43
MBD1-212ENST00000585672 PTCH1Q13635 1447 aa17.75■□□□□ 0.43
MBD1-212ENST00000585672 SPHKAPQ2M3C7 1700 aa17.75■□□□□ 0.43
MBD1-212ENST00000585672 ABCC4O15439 1325 aa17.75■□□□□ 0.43
MBD1-212ENST00000585672 FIBPO43427 364 aa17.75■□□□□ 0.43
MBD1-212ENST00000585672 PLA2G4AP47712 749 aa17.75■□□□□ 0.43
MBD1-212ENST00000585672 LCMT1Q9UIC8 334 aa17.75■□□□□ 0.43
MBD1-212ENST00000585672 H2AFXP16104 143 aaPredicted RBP17.74■□□□□ 0.43
MBD1-212ENST00000585672 C10orf67Q8IYJ2 551 aa17.74■□□□□ 0.43
MBD1-212ENST00000585672 MAGI1Q96QZ7 1491 aaPredicted RBP17.74■□□□□ 0.43
MBD1-212ENST00000585672 CFAP70Q5T0N1 1121 aa17.74■□□□□ 0.43
MBD1-212ENST00000585672 KRBA2Q6ZNG9 492 aa17.74■□□□□ 0.43
MBD1-212ENST00000585672 SIRT1Q96EB6 747 aa17.74■□□□□ 0.43
MBD1-212ENST00000585672 MYO1CO00159 1063 aa17.73■□□□□ 0.43
MBD1-212ENST00000585672 NYAP1Q6ZVC0 841 aa17.73■□□□□ 0.43
MBD1-212ENST00000585672 MYOM2P54296 1465 aa17.73■□□□□ 0.43
MBD1-212ENST00000585672 ZSCAN22P10073 491 aaPredicted RBP17.73■□□□□ 0.43
MBD1-212ENST00000585672 BRD2P25440 801 aaKnown RBP17.73■□□□□ 0.43
MBD1-212ENST00000585672 ZNF75DP51815 510 aa17.73■□□□□ 0.43
MBD1-212ENST00000585672 PLA2G4DQ86XP0 818 aa17.73■□□□□ 0.43
MBD1-212ENST00000585672 SLU7O95391 586 aaKnown RBP17.72■□□□□ 0.43
MBD1-212ENST00000585672 CCDC144BQ3MJ40 725 aa17.72■□□□□ 0.43
MBD1-212ENST00000585672 CCDC144CPQ8IYA2 1237 aa17.72■□□□□ 0.43
MBD1-212ENST00000585672 TXLNBQ8N3L3 684 aa17.72■□□□□ 0.43
MBD1-212ENST00000585672 MRVI1Q9Y6F6 885 aa17.72■□□□□ 0.43
MBD1-212ENST00000585672 TRAPPC8Q9Y2L5 1435 aa17.72■□□□□ 0.43
MBD1-212ENST00000585672 PNMA6AP0CW24 399 aaPredicted RBP17.72■□□□□ 0.43
MBD1-212ENST00000585672 CASQ1P31415 396 aa17.72■□□□□ 0.43
MBD1-212ENST00000585672 ICE2Q659A1 982 aa17.72■□□□□ 0.43
MBD1-212ENST00000585672 UPF3BQ9BZI7 483 aaKnown RBP17.72■□□□□ 0.43
MBD1-212ENST00000585672 RGS12O14924 1447 aa17.72■□□□□ 0.43
MBD1-212ENST00000585672 APBB1O00213 710 aa17.71■□□□□ 0.43
MBD1-212ENST00000585672 PTPN14Q15678 1187 aa17.71■□□□□ 0.43
MBD1-212ENST00000585672 KNDC1Q76NI1 1749 aa17.71■□□□□ 0.43
MBD1-212ENST00000585672 VAMP4O75379 141 aa17.71■□□□□ 0.43
MBD1-212ENST00000585672 TRIM5Q9C035 493 aa17.71■□□□□ 0.43
MBD1-212ENST00000585672 ATG3Q9NT62 314 aa17.71■□□□□ 0.43
MBD1-212ENST00000585672 CCDC171Q6TFL3 1326 aa17.71■□□□□ 0.42
MBD1-212ENST00000585672 SAMD9LQ8IVG5 1584 aa17.7■□□□□ 0.42
MBD1-212ENST00000585672 POLR3GO15318 223 aaPredicted RBP17.7■□□□□ 0.42
MBD1-212ENST00000585672 CLCN6P51797 869 aa17.7■□□□□ 0.42
MBD1-212ENST00000585672 ST5P78524 1137 aa17.7■□□□□ 0.42
MBD1-212ENST00000585672 ZNF428Q96B54 188 aa17.7■□□□□ 0.42
MBD1-212ENST00000585672 ERCC6LQ2NKX8 1250 aa17.7■□□□□ 0.42
MBD1-212ENST00000585672 EXOC6BQ9Y2D4 811 aa17.7■□□□□ 0.42
MBD1-212ENST00000585672 TYRO3Q06418 890 aa17.69■□□□□ 0.42
MBD1-212ENST00000585672 TEX35Q5T0J7 233 aa17.69■□□□□ 0.42
MBD1-212ENST00000585672 CTR9Q6PD62 1173 aa17.69■□□□□ 0.42
MBD1-212ENST00000585672 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.69■□□□□ 0.42
MBD1-212ENST00000585672 SMARCE1Q969G3 411 aa17.69■□□□□ 0.42
MBD1-212ENST00000585672 CBX8Q9HC52 389 aa17.69■□□□□ 0.42
MBD1-212ENST00000585672 LRRFIP2Q9Y608 721 aaKnown RBP17.69■□□□□ 0.42
MBD1-212ENST00000585672 MAST1Q9Y2H9 1570 aa17.69■□□□□ 0.42
MBD1-212ENST00000585672 RNF20Q5VTR2 975 aa17.69■□□□□ 0.42
MBD1-212ENST00000585672 TSPYL6Q8N831 410 aa17.69■□□□□ 0.42
MBD1-212ENST00000585672 MYCNP04198 464 aaPredicted RBP17.68■□□□□ 0.42
MBD1-212ENST00000585672 PRR29P0C7W0 189 aa17.68■□□□□ 0.42
MBD1-212ENST00000585672 CLIP2Q9UDT6 1046 aa17.68■□□□□ 0.42
MBD1-212ENST00000585672 F13A1P00488 732 aa17.68■□□□□ 0.42
MBD1-212ENST00000585672 SYT1P21579 422 aa17.68■□□□□ 0.42
MBD1-212ENST00000585672 ANAPC15P60006 121 aa17.68■□□□□ 0.42
MBD1-212ENST00000585672 ARID5BQ14865 1188 aa17.68■□□□□ 0.42
MBD1-212ENST00000585672 CCDC191Q8NCU4 936 aa17.68■□□□□ 0.42
MBD1-212ENST00000585672 HTATSF1O43719 755 aaKnown RBP17.67■□□□□ 0.42
MBD1-212ENST00000585672 STX6O43752 255 aa17.67■□□□□ 0.42
MBD1-212ENST00000585672 ZSCAN26Q16670 478 aa17.67■□□□□ 0.42
MBD1-212ENST00000585672 LRRN4CLQ8ND94 238 aa17.67■□□□□ 0.42
MBD1-212ENST00000585672 MCCP23508 829 aa17.67■□□□□ 0.42
MBD1-212ENST00000585672 LRRC8AQ8IWT6 810 aa17.67■□□□□ 0.42
MBD1-212ENST00000585672 ESYT1Q9BSJ8 1104 aa17.67■□□□□ 0.42
MBD1-212ENST00000585672 RAD50Q92878 1312 aa17.67■□□□□ 0.42
MBD1-212ENST00000585672 DNM1Q05193 864 aaKnown RBP17.66■□□□□ 0.42
MBD1-212ENST00000585672 CAMK4Q16566 473 aa17.66■□□□□ 0.42
MBD1-212ENST00000585672 ANO6Q4KMQ2 910 aa17.66■□□□□ 0.42
MBD1-212ENST00000585672 ANKRD44Q8N8A2 993 aa17.66■□□□□ 0.42
MBD1-212ENST00000585672 CHMP7Q8WUX9 453 aaPredicted RBP17.66■□□□□ 0.42
MBD1-212ENST00000585672 MYCBPQ99417 103 aaPredicted RBP17.66■□□□□ 0.42
MBD1-212ENST00000585672 NCAPGQ9BPX3 1015 aa17.66■□□□□ 0.42
MBD1-212ENST00000585672 CLGNO14967 610 aa17.66■□□□□ 0.42
MBD1-212ENST00000585672 ZRANB2O95218 330 aaKnown RBP eCLIP17.66■□□□□ 0.42
MBD1-212ENST00000585672 MAP3K11Q16584 847 aa17.66■□□□□ 0.42
MBD1-212ENST00000585672 ELL2O00472 640 aaPredicted RBP17.65■□□□□ 0.42
MBD1-212ENST00000585672 GUCY2CP25092 1073 aa17.65■□□□□ 0.42
MBD1-212ENST00000585672 TPM4P67936 248 aa17.65■□□□□ 0.42
MBD1-212ENST00000585672 TRMT1Q9NXH9 659 aaKnown RBP17.65■□□□□ 0.42
MBD1-212ENST00000585672 KIAA1210Q9ULL0 1709 aa17.65■□□□□ 0.42
MBD1-212ENST00000585672 APPP05067 770 aa17.65■□□□□ 0.42
MBD1-212ENST00000585672 SBNO2Q9Y2G9 1366 aa17.65■□□□□ 0.42
MBD1-212ENST00000585672 SLC26A8Q96RN1 970 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms