RNA–Protein interactions for RNA: ENST00000585600.5

LAMA3-204, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best)

Gene LAMA3, Length 1,815 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-204ENST00000585600 ADAMTS7Q9UKP4 1686 aa29.17■■■□□ 2.26
LAMA3-204ENST00000585600 FANCIQ9NVI1 1328 aa29.17■■■□□ 2.26
LAMA3-204ENST00000585600 MBIPQ9NS73 344 aa29.17■■■□□ 2.26
LAMA3-204ENST00000585600 RCAN3Q9UKA8 241 aa29.17■■■□□ 2.26
LAMA3-204ENST00000585600 THSD7AQ9UPZ6 1657 aa29.16■■■□□ 2.26
LAMA3-204ENST00000585600 TAF7Q15545 349 aaPredicted RBP29.16■■■□□ 2.26
LAMA3-204ENST00000585600 TEFQ10587 303 aa29.15■■■□□ 2.26
LAMA3-204ENST00000585600 SEPT12Q8IYM1 358 aa29.15■■■□□ 2.26
LAMA3-204ENST00000585600 RBM6P78332 1123 aaKnown RBP29.15■■■□□ 2.26
LAMA3-204ENST00000585600 SLC52A2Q9HAB3 445 aa29.14■■■□□ 2.26
LAMA3-204ENST00000585600 RRP1P56182 461 aaKnown RBP29.13■■■□□ 2.25
LAMA3-204ENST00000585600 POTEAQ6S8J7 498 aa29.13■■■□□ 2.25
LAMA3-204ENST00000585600 NFATC2IPQ8NCF5 419 aa29.13■■■□□ 2.25
LAMA3-204ENST00000585600 ERVV-2B6SEH9 535 aa29.1■■■□□ 2.25
LAMA3-204ENST00000585600 TSPYL4Q9UJ04 414 aa29.1■■■□□ 2.25
LAMA3-204ENST00000585600 BABAM1Q9NWV8 329 aa29.1■■■□□ 2.25
LAMA3-204ENST00000585600 CABP4P57796 275 aa29.09■■■□□ 2.25
LAMA3-204ENST00000585600 MRC1P22897 1456 aa29.09■■■□□ 2.25
LAMA3-204ENST00000585600 EXOSC9Q06265 439 aaKnown RBP29.08■■■□□ 2.25
LAMA3-204ENST00000585600 SCN11AQ9UI33 1791 aa29.08■■■□□ 2.25
LAMA3-204ENST00000585600 BTBD11A6QL63 1104 aa29.08■■■□□ 2.25
LAMA3-204ENST00000585600 RXRBP28702 533 aa29.08■■■□□ 2.25
LAMA3-204ENST00000585600 KCNQ3O43525 872 aa29.06■■■□□ 2.24
LAMA3-204ENST00000585600 CCDC136Q96JN2 1154 aa29.05■■■□□ 2.24
LAMA3-204ENST00000585600 FAM182BQ5T319 152 aa29.04■■■□□ 2.24
LAMA3-204ENST00000585600 TOGARAM1Q9Y4F4 1720 aa29.04■■■□□ 2.24
LAMA3-204ENST00000585600 KRT24Q2M2I5 525 aa29.04■■■□□ 2.24
LAMA3-204ENST00000585600 SLC39A6Q13433 755 aa29.03■■■□□ 2.24
LAMA3-204ENST00000585600 TSPYL6Q8N831 410 aa29.03■■■□□ 2.24
LAMA3-204ENST00000585600 C8orf58Q8NAV2 365 aa29.03■■■□□ 2.24
LAMA3-204ENST00000585600 PRIM1P49642 420 aaKnown RBP29.01■■■□□ 2.24
LAMA3-204ENST00000585600 PIGBQ92521 554 aa29.01■■■□□ 2.24
LAMA3-204ENST00000585600 VIRMAQ69YN4 1812 aaKnown RBP29.01■■■□□ 2.23
LAMA3-204ENST00000585600 ACSBG1Q96GR2 724 aa29.01■■■□□ 2.23
LAMA3-204ENST00000585600 TMOD3Q9NYL9 352 aa29.01■■■□□ 2.23
LAMA3-204ENST00000585600 SIPA1L3O60292 1781 aaPredicted RBP29.01■■■□□ 2.23
LAMA3-204ENST00000585600 ZNF790Q6PG37 636 aa29■■■□□ 2.23
LAMA3-204ENST00000585600 ELL2O00472 640 aaPredicted RBP28.99■■■□□ 2.23
LAMA3-204ENST00000585600 EIF4A1P60842 406 aaKnown RBP28.99■■■□□ 2.23
LAMA3-204ENST00000585600 KRT27Q7Z3Y8 459 aa28.98■■■□□ 2.23
LAMA3-204ENST00000585600 SYTL4Q96C24 671 aaPredicted RBP28.98■■■□□ 2.23
LAMA3-204ENST00000585600 BCL9O00512 1426 aa28.97■■■□□ 2.23
LAMA3-204ENST00000585600 VAMP4O75379 141 aa28.97■■■□□ 2.23
LAMA3-204ENST00000585600 KCNQ2O43526 872 aa28.97■■■□□ 2.23
LAMA3-204ENST00000585600 TWISTNBQ3B726 338 aaPredicted RBP28.96■■■□□ 2.23
LAMA3-204ENST00000585600 RGS12O14924 1447 aa28.95■■■□□ 2.23
LAMA3-204ENST00000585600 CT47B1P0C2W7 299 aaPredicted RBP28.94■■■□□ 2.22
LAMA3-204ENST00000585600 KDM3BQ7LBC6 1761 aa28.94■■■□□ 2.22
LAMA3-204ENST00000585600 ASAP1Q9ULH1 1129 aa28.94■■■□□ 2.22
LAMA3-204ENST00000585600 HEG1Q9ULI3 1381 aa28.93■■■□□ 2.22
LAMA3-204ENST00000585600 ATG3Q9NT62 314 aa28.93■■■□□ 2.22
LAMA3-204ENST00000585600 ZNF496Q96IT1 587 aaPredicted RBP28.92■■■□□ 2.22
LAMA3-204ENST00000585600 DOT1LQ8TEK3 1739 aa28.92■■■□□ 2.22
LAMA3-204ENST00000585600 PTF1AQ7RTS3 328 aa28.92■■■□□ 2.22
LAMA3-204ENST00000585600 TTC5Q8N0Z6 440 aa28.92■■■□□ 2.22
LAMA3-204ENST00000585600 RARSP54136 660 aaKnown RBP28.9■■■□□ 2.22
LAMA3-204ENST00000585600 EXOC6Q8TAG9 804 aa28.9■■■□□ 2.22
LAMA3-204ENST00000585600 BRWD3Q6RI45 1802 aa28.88■■■□□ 2.21
LAMA3-204ENST00000585600 GIGYF1O75420 1035 aaPredicted RBP28.88■■■□□ 2.21
LAMA3-204ENST00000585600 ITGB4P16144 1822 aa28.88■■■□□ 2.21
LAMA3-204ENST00000585600 PRAMEF22A3QJZ6 481 aa28.87■■■□□ 2.21
LAMA3-204ENST00000585600 BCAR3O75815 825 aa28.87■■■□□ 2.21
LAMA3-204ENST00000585600 FAM196AQ6ZSG2 479 aa28.87■■■□□ 2.21
LAMA3-204ENST00000585600 FMNL2Q96PY5 1086 aa28.87■■■□□ 2.21
LAMA3-204ENST00000585600 PTCD1O75127 700 aaKnown RBP28.85■■■□□ 2.21
LAMA3-204ENST00000585600 SSH1Q8WYL5 1049 aa28.85■■■□□ 2.21
LAMA3-204ENST00000585600 BCL2L13Q9BXK5 485 aa28.85■■■□□ 2.21
LAMA3-204ENST00000585600 PAPPAQ13219 1627 aa28.85■■■□□ 2.21
LAMA3-204ENST00000585600 KCPQ6ZWJ8 1503 aa28.85■■■□□ 2.21
LAMA3-204ENST00000585600 ZNF428Q96B54 188 aa28.85■■■□□ 2.21
LAMA3-204ENST00000585600 SOS1Q07889 1333 aaPredicted RBP28.84■■■□□ 2.21
LAMA3-204ENST00000585600 HOXB7P09629 217 aa28.84■■■□□ 2.21
LAMA3-204ENST00000585600 TCERG1O14776 1098 aaKnown RBP28.83■■■□□ 2.21
LAMA3-204ENST00000585600 ALDH1L2Q3SY69 923 aa28.82■■■□□ 2.2
LAMA3-204ENST00000585600 SNRPA1P09661 255 aaKnown RBP28.81■■■□□ 2.2
LAMA3-204ENST00000585600 NECTIN2Q92692 538 aa28.8■■■□□ 2.2
LAMA3-204ENST00000585600 SLC4A9Q96Q91 983 aa28.8■■■□□ 2.2
LAMA3-204ENST00000585600 EIF2S2P20042 333 aaKnown RBP28.8■■■□□ 2.2
LAMA3-204ENST00000585600 USP16Q9Y5T5 823 aa28.8■■■□□ 2.2
LAMA3-204ENST00000585600 EP400Q96L91 3159 aa28.8■■■□□ 2.2
LAMA3-204ENST00000585600 HDGFL1Q5TGJ6 251 aa28.79■■■□□ 2.2
LAMA3-204ENST00000585600 RBM42Q9BTD8 480 aaKnown RBP28.79■■■□□ 2.2
LAMA3-204ENST00000585600 BCL11BQ9C0K0 894 aaPredicted RBP28.79■■■□□ 2.2
LAMA3-204ENST00000585600 SMC4Q9NTJ3 1288 aa28.79■■■□□ 2.2
LAMA3-204ENST00000585600 UBR2Q8IWV8 1755 aa28.79■■■□□ 2.2
LAMA3-204ENST00000585600 NHSQ6T4R5 1651 aa28.78■■■□□ 2.2
LAMA3-204ENST00000585600 MRPL50Q8N5N7 158 aaKnown RBP28.78■■■□□ 2.2
LAMA3-204ENST00000585600 KAT6BQ8WYB5 2073 aa28.77■■■□□ 2.2
LAMA3-204ENST00000585600 PALLDQ8WX93 1383 aa28.76■■■□□ 2.2
LAMA3-204ENST00000585600 PLIN1O60240 522 aa28.76■■■□□ 2.19
LAMA3-204ENST00000585600 TRIM37O94972 964 aa28.76■■■□□ 2.19
LAMA3-204ENST00000585600 CCDC30Q5VVM6 783 aa28.76■■■□□ 2.19
LAMA3-204ENST00000585600 VSIG10Q8N0Z9 540 aa28.76■■■□□ 2.19
LAMA3-204ENST00000585600 SMARCC1Q92922 1105 aaPredicted RBP28.76■■■□□ 2.19
LAMA3-204ENST00000585600 BRPF1P55201 1214 aaPredicted RBP28.75■■■□□ 2.19
LAMA3-204ENST00000585600 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.75■■■□□ 2.19
LAMA3-204ENST00000585600 SBF2Q86WG5 1849 aa28.73■■■□□ 2.19
LAMA3-204ENST00000585600 LOC102724428A0A0B4J2F2 783 aa28.73■■■□□ 2.19
LAMA3-204ENST00000585600 SLC4A2P04920 1241 aa28.73■■■□□ 2.19
LAMA3-204ENST00000585600 SIK1P57059 783 aa28.73■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms