RNA–Protein interactions for RNA: ENST00000585409.2

LSM7-203, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM7, Length 512 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-203ENST00000585409 ASAP1Q9ULH1 1129 aa31.43■■■□□ 2.62
LSM7-203ENST00000585409 PHKG2P15735 406 aa31.42■■■□□ 2.62
LSM7-203ENST00000585409 ITPK1Q13572 414 aa31.42■■■□□ 2.62
LSM7-203ENST00000585409 KIF13BQ9NQT8 1826 aa31.42■■■□□ 2.62
LSM7-203ENST00000585409 PLEKHG2Q9H7P9 1386 aa31.42■■■□□ 2.62
LSM7-203ENST00000585409 IFNL2Q8IZJ0 200 aa31.41■■■□□ 2.62
LSM7-203ENST00000585409 GPBP1L1Q9HC44 474 aaPredicted RBP31.41■■■□□ 2.62
LSM7-203ENST00000585409 ZNF831Q5JPB2 1677 aa31.41■■■□□ 2.62
LSM7-203ENST00000585409 PER1O15534 1290 aaPredicted RBP31.4■■■□□ 2.62
LSM7-203ENST00000585409 MORC1Q86VD1 984 aa31.39■■■□□ 2.62
LSM7-203ENST00000585409 NPC1L1Q9UHC9 1359 aa31.38■■■□□ 2.61
LSM7-203ENST00000585409 CICQ96RK0 1608 aaPredicted RBP31.38■■■□□ 2.61
LSM7-203ENST00000585409 ZNF316A6NFI3 1004 aaPredicted RBP31.37■■■□□ 2.61
LSM7-203ENST00000585409 GNPATO15228 680 aa31.37■■■□□ 2.61
LSM7-203ENST00000585409 ATP6V1AP38606 617 aa31.37■■■□□ 2.61
LSM7-203ENST00000585409 AMER1Q5JTC6 1135 aaPredicted RBP31.37■■■□□ 2.61
LSM7-203ENST00000585409 ATG3Q9NT62 314 aa31.37■■■□□ 2.61
LSM7-203ENST00000585409 KIAA1551Q9HCM1 1747 aa31.37■■■□□ 2.61
LSM7-203ENST00000585409 KDRP35968 1356 aa31.36■■■□□ 2.61
LSM7-203ENST00000585409 EIF4A2Q14240 407 aaKnown RBP31.35■■■□□ 2.61
LSM7-203ENST00000585409 COL5A3P25940 1745 aaPredicted RBP31.34■■■□□ 2.61
LSM7-203ENST00000585409 WWC3Q9ULE0 1092 aa31.33■■■□□ 2.61
LSM7-203ENST00000585409 N4BP2Q86UW6 1770 aaPredicted RBP31.3■■■□□ 2.6
LSM7-203ENST00000585409 PXDNLA1KZ92 1463 aa31.3■■■□□ 2.6
LSM7-203ENST00000585409 ZNF526Q8TF50 670 aaPredicted RBP31.3■■■□□ 2.6
LSM7-203ENST00000585409 MMP10P09238 476 aa31.29■■■□□ 2.6
LSM7-203ENST00000585409 DDX10Q13206 875 aaKnown RBP31.29■■■□□ 2.6
LSM7-203ENST00000585409 CC2D1BQ5T0F9 858 aaKnown RBP31.29■■■□□ 2.6
LSM7-203ENST00000585409 SLC4A9Q96Q91 983 aa31.29■■■□□ 2.6
LSM7-203ENST00000585409 ERVV-2B6SEH9 535 aa31.28■■■□□ 2.6
LSM7-203ENST00000585409 IFFO2Q5TF58 517 aa31.28■■■□□ 2.6
LSM7-203ENST00000585409 TNNT2P45379 298 aaPredicted RBP31.27■■■□□ 2.6
LSM7-203ENST00000585409 HSPA6P17066 643 aa31.26■■■□□ 2.59
LSM7-203ENST00000585409 RTCBQ9Y3I0 505 aaKnown RBP31.26■■■□□ 2.59
LSM7-203ENST00000585409 MYH14Q7Z406 1995 aaKnown RBP31.25■■■□□ 2.59
LSM7-203ENST00000585409 TRAPPC3LQ5T215 181 aa31.25■■■□□ 2.59
LSM7-203ENST00000585409 RC3H1Q5TC82 1133 aaKnown RBP31.25■■■□□ 2.59
LSM7-203ENST00000585409 DCAF5Q96JK2 942 aa31.25■■■□□ 2.59
LSM7-203ENST00000585409 BRCA1P38398 1863 aaKnown RBP31.25■■■□□ 2.59
LSM7-203ENST00000585409 C10orf71Q711Q0 1435 aa31.24■■■□□ 2.59
LSM7-203ENST00000585409 C4AP0C0L4 1744 aa31.24■■■□□ 2.59
LSM7-203ENST00000585409 NLGN1Q8N2Q7 840 aa31.24■■■□□ 2.59
LSM7-203ENST00000585409 KDM6AO15550 1401 aaPredicted RBP31.24■■■□□ 2.59
LSM7-203ENST00000585409 CNTNAP4Q9C0A0 1308 aa31.24■■■□□ 2.59
LSM7-203ENST00000585409 HSP90AB1P08238 724 aaKnown RBP31.23■■■□□ 2.59
LSM7-203ENST00000585409 ADRA2BP18089 450 aa31.23■■■□□ 2.59
LSM7-203ENST00000585409 TGFB2P61812 414 aa31.23■■■□□ 2.59
LSM7-203ENST00000585409 KIF3CO14782 793 aa31.22■■■□□ 2.59
LSM7-203ENST00000585409 ARHGEF1Q92888 912 aaKnown RBP31.21■■■□□ 2.59
LSM7-203ENST00000585409 RBM42Q9BTD8 480 aaKnown RBP31.21■■■□□ 2.59
LSM7-203ENST00000585409 CNGB1Q14028 1251 aaPredicted RBP31.19■■■□□ 2.58
LSM7-203ENST00000585409 PLEKHO1Q53GL0 409 aaPredicted RBP31.19■■■□□ 2.58
LSM7-203ENST00000585409 RPS6KA4O75676 772 aa31.18■■■□□ 2.58
LSM7-203ENST00000585409 GYS1P13807 737 aa31.18■■■□□ 2.58
LSM7-203ENST00000585409 A0A0G2JLW4 131 aa31.17■■■□□ 2.58
LSM7-203ENST00000585409 AMOTQ4VCS5 1084 aa31.17■■■□□ 2.58
LSM7-203ENST00000585409 ZNF530Q6P9A1 599 aaPredicted RBP31.16■■■□□ 2.58
LSM7-203ENST00000585409 ARFGEF1Q9Y6D6 1849 aa31.15■■■□□ 2.58
LSM7-203ENST00000585409 BCS1LQ9Y276 419 aa31.15■■■□□ 2.58
LSM7-203ENST00000585409 RFC4P35249 363 aa31.14■■■□□ 2.58
LSM7-203ENST00000585409 CABP4P57796 275 aa31.14■■■□□ 2.58
LSM7-203ENST00000585409 CCDC87Q9NVE4 849 aa31.14■■■□□ 2.58
LSM7-203ENST00000585409 TJP1Q07157 1748 aa31.13■■■□□ 2.57
LSM7-203ENST00000585409 DPEP1P16444 411 aa31.12■■■□□ 2.57
LSM7-203ENST00000585409 SCN11AQ9UI33 1791 aa31.12■■■□□ 2.57
LSM7-203ENST00000585409 MTHFSP49914 203 aa31.1■■■□□ 2.57
LSM7-203ENST00000585409 AEBP1Q8IUX7 1158 aa31.1■■■□□ 2.57
LSM7-203ENST00000585409 PARP3Q9Y6F1 533 aa31.1■■■□□ 2.57
LSM7-203ENST00000585409 KCNA3P22001 575 aa31.08■■■□□ 2.57
LSM7-203ENST00000585409 RALBP1Q15311 655 aa31.08■■■□□ 2.57
LSM7-203ENST00000585409 ADAMTS7Q9UKP4 1686 aa31.08■■■□□ 2.57
LSM7-203ENST00000585409 PTCD1O75127 700 aaKnown RBP31.07■■■□□ 2.56
LSM7-203ENST00000585409 CRKLP46109 303 aaKnown RBP31.07■■■□□ 2.56
LSM7-203ENST00000585409 C1orf141Q5JVX7 400 aa31.07■■■□□ 2.56
LSM7-203ENST00000585409 ARHGAP27Q6ZUM4 889 aa31.07■■■□□ 2.56
LSM7-203ENST00000585409 NFATC2IPQ8NCF5 419 aa31.06■■■□□ 2.56
LSM7-203ENST00000585409 FCHSD2O94868 740 aa31.05■■■□□ 2.56
LSM7-203ENST00000585409 CFAP53Q96M91 514 aa31.05■■■□□ 2.56
LSM7-203ENST00000585409 USP42Q9H9J4 1324 aaKnown RBP31.04■■■□□ 2.56
LSM7-203ENST00000585409 TOMM70O94826 608 aa31.04■■■□□ 2.56
LSM7-203ENST00000585409 SULT6B1Q6IMI4 303 aa31.03■■■□□ 2.56
LSM7-203ENST00000585409 SRP68Q9UHB9 627 aaKnown RBP31.03■■■□□ 2.56
LSM7-203ENST00000585409 VIRMAQ69YN4 1812 aaKnown RBP31.02■■■□□ 2.56
LSM7-203ENST00000585409 PPP2R1AP30153 589 aa31.01■■■□□ 2.55
LSM7-203ENST00000585409 APLP1P51693 650 aa31.01■■■□□ 2.55
LSM7-203ENST00000585409 FKBP8Q14318 412 aa31.01■■■□□ 2.55
LSM7-203ENST00000585409 IL13P35225 146 aa31■■■□□ 2.55
LSM7-203ENST00000585409 DDR1Q08345 913 aa31■■■□□ 2.55
LSM7-203ENST00000585409 NMRK2Q9NPI5 230 aa31■■■□□ 2.55
LSM7-203ENST00000585409 PIM2Q9P1W9 311 aa31■■■□□ 2.55
LSM7-203ENST00000585409 INTS5Q6P9B9 1019 aaKnown RBP30.99■■■□□ 2.55
LSM7-203ENST00000585409 SBF1O95248 1867 aa30.98■■■□□ 2.55
LSM7-203ENST00000585409 C9orf131Q5VYM1 1079 aa30.97■■■□□ 2.55
LSM7-203ENST00000585409 MRC1P22897 1456 aa30.96■■■□□ 2.55
LSM7-203ENST00000585409 DIAPH1O60610 1272 aaKnown RBP30.96■■■□□ 2.55
LSM7-203ENST00000585409 AKAP4Q5JQC9 854 aa30.95■■■□□ 2.55
LSM7-203ENST00000585409 POLRMTO00411 1230 aaKnown RBP30.94■■■□□ 2.54
LSM7-203ENST00000585409 TM4SF1P30408 202 aa30.94■■■□□ 2.54
LSM7-203ENST00000585409 DALRD3Q5D0E6 543 aaKnown RBP30.94■■■□□ 2.54
LSM7-203ENST00000585409 DNAJC5GQ8N7S2 189 aa30.94■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms