RNA–Protein interactions for RNA: ENST00000585339.5

RANBP3-204, Transcript of RAN binding protein 3, humanhuman

TSL 4

Gene RANBP3, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-204ENST00000585339 SSFA2P28290 1259 aa10.69□□□□□ -0.7
RANBP3-204ENST00000585339 HSP90AB2PQ58FF8 381 aa10.69□□□□□ -0.7
RANBP3-204ENST00000585339 COL13A1Q5TAT6 717 aaPredicted RBP10.69□□□□□ -0.7
RANBP3-204ENST00000585339 RAPGEF4Q8WZA2 1011 aa10.69□□□□□ -0.7
RANBP3-204ENST00000585339 PUS7Q96PZ0 661 aaKnown RBP10.69□□□□□ -0.7
RANBP3-204ENST00000585339 SCN11AQ9UI33 1791 aa10.69□□□□□ -0.7
RANBP3-204ENST00000585339 NRXN2Q9P2S2 1712 aa10.69□□□□□ -0.7
RANBP3-204ENST00000585339 TOMM70O94826 608 aa10.68□□□□□ -0.7
RANBP3-204ENST00000585339 GGNBP2Q9H3C7 697 aa10.68□□□□□ -0.7
RANBP3-204ENST00000585339 FYB1O15117 783 aa10.67□□□□□ -0.7
RANBP3-204ENST00000585339 MMP10P09238 476 aa10.67□□□□□ -0.7
RANBP3-204ENST00000585339 ANKRD31Q8N7Z5 1873 aa10.67□□□□□ -0.7
RANBP3-204ENST00000585339 LOC102724428A0A0B4J2F2 783 aa10.66□□□□□ -0.7
RANBP3-204ENST00000585339 GNPATO15228 680 aa10.66□□□□□ -0.7
RANBP3-204ENST00000585339 SIK1P57059 783 aa10.66□□□□□ -0.7
RANBP3-204ENST00000585339 NKX1-1Q15270 411 aaPredicted RBP10.66□□□□□ -0.7
RANBP3-204ENST00000585339 JMYQ8N9B5 988 aa10.66□□□□□ -0.7
RANBP3-204ENST00000585339 SMARCC1Q92922 1105 aaPredicted RBP10.66□□□□□ -0.7
RANBP3-204ENST00000585339 COL11A2P13942 1736 aaPredicted RBP10.66□□□□□ -0.7
RANBP3-204ENST00000585339 KIF24Q5T7B8 1368 aa10.65□□□□□ -0.7
RANBP3-204ENST00000585339 A0A0G2JLW4 131 aa10.65□□□□□ -0.7
RANBP3-204ENST00000585339 KLRG1Q96E93 195 aa10.65□□□□□ -0.7
RANBP3-204ENST00000585339 SLC4A9Q96Q91 983 aa10.65□□□□□ -0.7
RANBP3-204ENST00000585339 ASAP1Q9ULH1 1129 aa10.65□□□□□ -0.7
RANBP3-204ENST00000585339 EMILIN1Q9Y6C2 1016 aa10.65□□□□□ -0.7
RANBP3-204ENST00000585339 FER1L6Q2WGJ9 1857 aa10.65□□□□□ -0.7
RANBP3-204ENST00000585339 ST20-MTHFSA0A0A6YYL1 179 aa10.64□□□□□ -0.71
RANBP3-204ENST00000585339 DPEP1P16444 411 aa10.64□□□□□ -0.71
RANBP3-204ENST00000585339 RBM46Q8TBY0 533 aaKnown RBP10.64□□□□□ -0.71
RANBP3-204ENST00000585339 BCS1LQ9Y276 419 aa10.64□□□□□ -0.71
RANBP3-204ENST00000585339 PLEKHG2Q9H7P9 1386 aa10.64□□□□□ -0.71
RANBP3-204ENST00000585339 CAPN15O75808 1086 aa10.63□□□□□ -0.71
RANBP3-204ENST00000585339 KCNA3P22001 575 aa10.63□□□□□ -0.71
RANBP3-204ENST00000585339 ATG3Q9NT62 314 aa10.63□□□□□ -0.71
RANBP3-204ENST00000585339 KDM6AO15550 1401 aaPredicted RBP10.63□□□□□ -0.71
RANBP3-204ENST00000585339 TONSLQ96HA7 1378 aa10.63□□□□□ -0.71
RANBP3-204ENST00000585339 TGFB2P61812 414 aa10.62□□□□□ -0.71
RANBP3-204ENST00000585339 UBR2Q8IWV8 1755 aa10.62□□□□□ -0.71
RANBP3-204ENST00000585339 ARFGEF2Q9Y6D5 1785 aa10.62□□□□□ -0.71
RANBP3-204ENST00000585339 GYS1P13807 737 aa10.61□□□□□ -0.71
RANBP3-204ENST00000585339 ATP6V1AP38606 617 aa10.61□□□□□ -0.71
RANBP3-204ENST00000585339 C9orf131Q5VYM1 1079 aa10.61□□□□□ -0.71
RANBP3-204ENST00000585339 ARHGAP27Q6ZUM4 889 aa10.61□□□□□ -0.71
RANBP3-204ENST00000585339 TMOD3Q9NYL9 352 aa10.61□□□□□ -0.71
RANBP3-204ENST00000585339 FCHSD2O94868 740 aa10.6□□□□□ -0.71
RANBP3-204ENST00000585339 PHKG2P15735 406 aa10.6□□□□□ -0.71
RANBP3-204ENST00000585339 DCAF5Q96JK2 942 aa10.6□□□□□ -0.71
RANBP3-204ENST00000585339 PRELPP51888 382 aa10.59□□□□□ -0.71
RANBP3-204ENST00000585339 DDR1Q08345 913 aa10.59□□□□□ -0.71
RANBP3-204ENST00000585339 ARHGEF1Q92888 912 aaKnown RBP10.59□□□□□ -0.71
RANBP3-204ENST00000585339 EYA1Q99502 592 aa10.59□□□□□ -0.71
RANBP3-204ENST00000585339 CARD14Q9BXL6 1004 aa10.59□□□□□ -0.71
RANBP3-204ENST00000585339 SCN7AQ01118 1682 aa10.59□□□□□ -0.71
RANBP3-204ENST00000585339 CNTNAP4Q9C0A0 1308 aa10.58□□□□□ -0.71
RANBP3-204ENST00000585339 HMGB2P26583 209 aaKnown RBP10.58□□□□□ -0.72
RANBP3-204ENST00000585339 TMF1P82094 1093 aa10.58□□□□□ -0.72
RANBP3-204ENST00000585339 FSTL1Q12841 308 aa10.58□□□□□ -0.72
RANBP3-204ENST00000585339 TNS4Q8IZW8 715 aa10.58□□□□□ -0.72
RANBP3-204ENST00000585339 CCDC87Q9NVE4 849 aa10.58□□□□□ -0.72
RANBP3-204ENST00000585339 TRAPPC3LQ5T215 181 aa10.57□□□□□ -0.72
RANBP3-204ENST00000585339 NLGN1Q8N2Q7 840 aa10.57□□□□□ -0.72
RANBP3-204ENST00000585339 RRAGCQ9HB90 399 aa10.57□□□□□ -0.72
RANBP3-204ENST00000585339 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.57□□□□□ -0.722e-6■□□□□ 10
RANBP3-204ENST00000585339 RNF181Q9P0P0 153 aa10.57□□□□□ -0.72
RANBP3-204ENST00000585339 SRP68Q9UHB9 627 aaKnown RBP10.57□□□□□ -0.72
RANBP3-204ENST00000585339 SPG7Q9UQ90 795 aa10.57□□□□□ -0.72
RANBP3-204ENST00000585339 RTCBQ9Y3I0 505 aaKnown RBP10.57□□□□□ -0.72
RANBP3-204ENST00000585339 SIPA1L3O60292 1781 aaPredicted RBP10.57□□□□□ -0.72
RANBP3-204ENST00000585339 WASHC2AQ641Q2 1341 aa10.57□□□□□ -0.72
RANBP3-204ENST00000585339 CHRNA5P30532 468 aa10.56□□□□□ -0.72
RANBP3-204ENST00000585339 RASSF7Q02833 373 aa10.56□□□□□ -0.72
RANBP3-204ENST00000585339 IFNL2Q8IZJ0 200 aa10.56□□□□□ -0.72
RANBP3-204ENST00000585339 BCORQ6W2J9 1755 aa10.56□□□□□ -0.72
RANBP3-204ENST00000585339 USP42Q9H9J4 1324 aaKnown RBP10.56□□□□□ -0.72
RANBP3-204ENST00000585339 RPS6KA4O75676 772 aa10.55□□□□□ -0.72
RANBP3-204ENST00000585339 HSPA1AP0DMV8 641 aaKnown RBP10.55□□□□□ -0.72
RANBP3-204ENST00000585339 HSPA1BP0DMV9 641 aaKnown RBP10.55□□□□□ -0.72
RANBP3-204ENST00000585339 ADRA2BP18089 450 aa10.55□□□□□ -0.72
RANBP3-204ENST00000585339 FKBP8Q14318 412 aa10.55□□□□□ -0.72
RANBP3-204ENST00000585339 RC3H1Q5TC82 1133 aaKnown RBP10.55□□□□□ -0.72
RANBP3-204ENST00000585339 SLX4Q8IY92 1834 aa10.55□□□□□ -0.72
RANBP3-204ENST00000585339 KDM2BQ8NHM5 1336 aa10.55□□□□□ -0.72
RANBP3-204ENST00000585339 MRC1P22897 1456 aa10.55□□□□□ -0.72
RANBP3-204ENST00000585339 CARMIL3Q8ND23 1372 aa10.54□□□□□ -0.72
RANBP3-204ENST00000585339 EIF4A2Q14240 407 aaKnown RBP10.54□□□□□ -0.72
RANBP3-204ENST00000585339 DALRD3Q5D0E6 543 aaKnown RBP10.54□□□□□ -0.72
RANBP3-204ENST00000585339 C16orf71Q8IYS4 520 aaPredicted RBP10.54□□□□□ -0.72
RANBP3-204ENST00000585339 RBM42Q9BTD8 480 aaKnown RBP10.54□□□□□ -0.72
RANBP3-204ENST00000585339 PIM2Q9P1W9 311 aa10.54□□□□□ -0.72
RANBP3-204ENST00000585339 PARP3Q9Y6F1 533 aa10.54□□□□□ -0.72
RANBP3-204ENST00000585339 ADAMTSL1Q8N6G6 1762 aa10.54□□□□□ -0.72
RANBP3-204ENST00000585339 SCN4AP35499 1836 aa10.54□□□□□ -0.72
RANBP3-204ENST00000585339 POLRMTO00411 1230 aaKnown RBP10.53□□□□□ -0.72
RANBP3-204ENST00000585339 PPM1GO15355 546 aaPredicted RBP10.53□□□□□ -0.72
RANBP3-204ENST00000585339 RFC4P35249 363 aa10.53□□□□□ -0.72
RANBP3-204ENST00000585339 POLKQ9UBT6 870 aa10.53□□□□□ -0.72
RANBP3-204ENST00000585339 POTECB2RU33 542 aa10.52□□□□□ -0.73
RANBP3-204ENST00000585339 SMC1BQ8NDV3 1235 aa10.52□□□□□ -0.73
RANBP3-204ENST00000585339 ERVV-2B6SEH9 535 aa10.51□□□□□ -0.73
RANBP3-204ENST00000585339 CRKLP46109 303 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms