RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 MARCH10Q8NA82 808 aaPredicted RBP16.76■□□□□ 0.27
TRIM47-202ENST00000585333 TSPYL4Q9UJ04 414 aa16.76■□□□□ 0.27
TRIM47-202ENST00000585333 BTBD11A6QL63 1104 aa16.75■□□□□ 0.27
TRIM47-202ENST00000585333 ZNF853P0CG23 659 aa16.75■□□□□ 0.27
TRIM47-202ENST00000585333 TTC5Q8N0Z6 440 aa16.75■□□□□ 0.27
TRIM47-202ENST00000585333 ZNF428Q96B54 188 aa16.75■□□□□ 0.27
TRIM47-202ENST00000585333 LGR6Q9HBX8 967 aa16.75■□□□□ 0.27
TRIM47-202ENST00000585333 LAS1LQ9Y4W2 734 aaKnown RBP16.75■□□□□ 0.27
TRIM47-202ENST00000585333 TRMT2AQ8IZ69 625 aaKnown RBP16.73■□□□□ 0.27
TRIM47-202ENST00000585333 THUMPD2Q9BTF0 503 aaKnown RBP16.73■□□□□ 0.27
TRIM47-202ENST00000585333 FANCIQ9NVI1 1328 aa16.72■□□□□ 0.27
TRIM47-202ENST00000585333 NFATC2IPQ8NCF5 419 aa16.72■□□□□ 0.27
TRIM47-202ENST00000585333 SMARCC1Q92922 1105 aaPredicted RBP16.72■□□□□ 0.27
TRIM47-202ENST00000585333 VIRMAQ69YN4 1812 aaKnown RBP16.71■□□□□ 0.27
TRIM47-202ENST00000585333 SENP3-EIF4A1A0A087X0R7 540 aa16.71■□□□□ 0.27
TRIM47-202ENST00000585333 HOXB7P09629 217 aa16.71■□□□□ 0.27
TRIM47-202ENST00000585333 DUSP27Q5VZP5 1158 aa16.71■□□□□ 0.27
TRIM47-202ENST00000585333 MBIPQ9NS73 344 aa16.71■□□□□ 0.27
TRIM47-202ENST00000585333 RGS12O14924 1447 aa16.7■□□□□ 0.26
TRIM47-202ENST00000585333 SIPA1L3O60292 1781 aaPredicted RBP16.7■□□□□ 0.26
TRIM47-202ENST00000585333 ZNF790Q6PG37 636 aa16.7■□□□□ 0.26
TRIM47-202ENST00000585333 SYTL4Q96C24 671 aaPredicted RBP16.7■□□□□ 0.26
TRIM47-202ENST00000585333 CDCA7LQ96GN5 454 aa16.69■□□□□ 0.26
TRIM47-202ENST00000585333 FMNL2Q96PY5 1086 aa16.69■□□□□ 0.26
TRIM47-202ENST00000585333 DOT1LQ8TEK3 1739 aa16.69■□□□□ 0.26
TRIM47-202ENST00000585333 PRIM1P49642 420 aaKnown RBP16.68■□□□□ 0.26
TRIM47-202ENST00000585333 TEX13AQ9BXU3 409 aaPredicted RBP16.68■□□□□ 0.26
TRIM47-202ENST00000585333 KDM3BQ7LBC6 1761 aa16.67■□□□□ 0.26
TRIM47-202ENST00000585333 NHSQ6T4R5 1651 aa16.67■□□□□ 0.26
TRIM47-202ENST00000585333 BCL11BQ9C0K0 894 aaPredicted RBP16.67■□□□□ 0.26
TRIM47-202ENST00000585333 TOGARAM1Q9Y4F4 1720 aa16.67■□□□□ 0.26
TRIM47-202ENST00000585333 VSIG10Q8N0Z9 540 aa16.66■□□□□ 0.26
TRIM47-202ENST00000585333 PIGBQ92521 554 aa16.66■□□□□ 0.26
TRIM47-202ENST00000585333 TSR2Q969E8 191 aaKnown RBP16.66■□□□□ 0.26
TRIM47-202ENST00000585333 SPINK5Q9NQ38 1064 aaPredicted RBP16.65■□□□□ 0.26
TRIM47-202ENST00000585333 ITGB4P16144 1822 aa16.65■□□□□ 0.26
TRIM47-202ENST00000585333 PAPPAQ13219 1627 aa16.64■□□□□ 0.25
TRIM47-202ENST00000585333 BRWD3Q6RI45 1802 aa16.64■□□□□ 0.25
TRIM47-202ENST00000585333 SNRPA1P09661 255 aaKnown RBP16.64■□□□□ 0.25
TRIM47-202ENST00000585333 EIF4A1P60842 406 aaKnown RBP16.64■□□□□ 0.25
TRIM47-202ENST00000585333 EXOSC9Q06265 439 aaKnown RBP16.64■□□□□ 0.25
TRIM47-202ENST00000585333 TWISTNBQ3B726 338 aaPredicted RBP16.64■□□□□ 0.25
TRIM47-202ENST00000585333 ACSBG1Q96GR2 724 aa16.64■□□□□ 0.25
TRIM47-202ENST00000585333 ALDH1L2Q3SY69 923 aa16.63■□□□□ 0.25
TRIM47-202ENST00000585333 KAT6BQ8WYB5 2073 aa16.62■□□□□ 0.25
TRIM47-202ENST00000585333 CCDC30Q5VVM6 783 aa16.62■□□□□ 0.25
TRIM47-202ENST00000585333 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.62■□□□□ 0.25
TRIM47-202ENST00000585333 STK31Q9BXU1 1019 aa16.62■□□□□ 0.25
TRIM47-202ENST00000585333 MIS18AQ9NYP9 233 aa16.62■□□□□ 0.25
TRIM47-202ENST00000585333 HEG1Q9ULI3 1381 aa16.62■□□□□ 0.25
TRIM47-202ENST00000585333 ATG3Q9NT62 314 aa16.61■□□□□ 0.25
TRIM47-202ENST00000585333 RCAN3Q9UKA8 241 aa16.61■□□□□ 0.25
TRIM47-202ENST00000585333 ERBB4Q15303 1308 aa16.61■□□□□ 0.25
TRIM47-202ENST00000585333 PALLDQ8WX93 1383 aa16.61■□□□□ 0.25
TRIM47-202ENST00000585333 UBR2Q8IWV8 1755 aa16.6■□□□□ 0.25
TRIM47-202ENST00000585333 STARD3NLO95772 234 aa16.6■□□□□ 0.25
TRIM47-202ENST00000585333 SLC39A6Q13433 755 aa16.6■□□□□ 0.25
TRIM47-202ENST00000585333 SF3B2Q13435 895 aaKnown RBP16.6■□□□□ 0.25
TRIM47-202ENST00000585333 SBF2Q86WG5 1849 aa16.59■□□□□ 0.25
TRIM47-202ENST00000585333 GIGYF1O75420 1035 aaPredicted RBP16.59■□□□□ 0.25
TRIM47-202ENST00000585333 CCDC125Q86Z20 511 aa16.59■□□□□ 0.25
TRIM47-202ENST00000585333 ZNF496Q96IT1 587 aaPredicted RBP16.59■□□□□ 0.25
TRIM47-202ENST00000585333 ASAP1Q9ULH1 1129 aa16.59■□□□□ 0.25
TRIM47-202ENST00000585333 KIF16BQ96L93 1317 aa16.59■□□□□ 0.25
TRIM47-202ENST00000585333 ZNF831Q5JPB2 1677 aa16.59■□□□□ 0.25
TRIM47-202ENST00000585333 VAMP4O75379 141 aa16.58■□□□□ 0.24
TRIM47-202ENST00000585333 SLC27A3Q5K4L6 730 aa16.58■□□□□ 0.24
TRIM47-202ENST00000585333 HDGFL1Q5TGJ6 251 aa16.58■□□□□ 0.24
TRIM47-202ENST00000585333 C8orf58Q8NAV2 365 aa16.58■□□□□ 0.24
TRIM47-202ENST00000585333 RBM42Q9BTD8 480 aaKnown RBP16.58■□□□□ 0.24
TRIM47-202ENST00000585333 KCPQ6ZWJ8 1503 aa16.58■□□□□ 0.24
TRIM47-202ENST00000585333 LOC102724428A0A0B4J2F2 783 aa16.57■□□□□ 0.24
TRIM47-202ENST00000585333 IPO8O15397 1037 aaKnown RBP16.57■□□□□ 0.24
TRIM47-202ENST00000585333 KCNQ2O43526 872 aa16.57■□□□□ 0.24
TRIM47-202ENST00000585333 PTCD1O75127 700 aaKnown RBP16.57■□□□□ 0.24
TRIM47-202ENST00000585333 MS4A1P11836 297 aa16.57■□□□□ 0.24
TRIM47-202ENST00000585333 SIK1P57059 783 aa16.57■□□□□ 0.24
TRIM47-202ENST00000585333 BTAF1O14981 1849 aa16.56■□□□□ 0.24
TRIM47-202ENST00000585333 CICQ96RK0 1608 aaPredicted RBP16.56■□□□□ 0.24
TRIM47-202ENST00000585333 PLSCR1O15162 318 aa16.56■□□□□ 0.24
TRIM47-202ENST00000585333 TRIM37O94972 964 aa16.56■□□□□ 0.24
TRIM47-202ENST00000585333 BRPF1P55201 1214 aaPredicted RBP16.56■□□□□ 0.24
TRIM47-202ENST00000585333 FAM182BQ5T319 152 aa16.56■□□□□ 0.24
TRIM47-202ENST00000585333 NPM2Q86SE8 214 aaKnown RBP16.56■□□□□ 0.24
TRIM47-202ENST00000585333 SMC4Q9NTJ3 1288 aa16.56■□□□□ 0.24
TRIM47-202ENST00000585333 DBF4Q9UBU7 674 aaPredicted RBP16.56■□□□□ 0.24
TRIM47-202ENST00000585333 ELL2O00472 640 aaPredicted RBP16.55■□□□□ 0.24
TRIM47-202ENST00000585333 KCNQ3O43525 872 aa16.55■□□□□ 0.24
TRIM47-202ENST00000585333 RARSP54136 660 aaKnown RBP16.55■□□□□ 0.24
TRIM47-202ENST00000585333 UPF1Q92900 1129 aaKnown RBP eCLIP16.55■□□□□ 0.24
TRIM47-202ENST00000585333 LAMB4A4D0S4 1761 aa16.55■□□□□ 0.24
TRIM47-202ENST00000585333 ATP6V1AP38606 617 aa16.54■□□□□ 0.24
TRIM47-202ENST00000585333 TSPYL6Q8N831 410 aa16.54■□□□□ 0.24
TRIM47-202ENST00000585333 HYPKQ9NX55 129 aa16.54■□□□□ 0.24
TRIM47-202ENST00000585333 CACNA1FO60840 1977 aa16.53■□□□□ 0.24
TRIM47-202ENST00000585333 CANXP27824 592 aaKnown RBP16.53■□□□□ 0.24
TRIM47-202ENST00000585333 RGPD3A6NKT7 1758 aaPredicted RBP16.53■□□□□ 0.24
TRIM47-202ENST00000585333 RGPD4Q7Z3J3 1758 aa16.53■□□□□ 0.24
TRIM47-202ENST00000585333 APBA3O96018 575 aa16.52■□□□□ 0.24
TRIM47-202ENST00000585333 EIF2S2P20042 333 aaKnown RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms