RNA–Protein interactions for RNA: ENST00000585096.1

SRSF1-209, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 4 BASIC

Gene SRSF1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-209ENST00000585096 C5P01031 1676 aa24.07■■□□□ 1.44
SRSF1-209ENST00000585096 MAP3K5Q99683 1374 aa24.06■■□□□ 1.44
SRSF1-209ENST00000585096 U2SURPO15042 1029 aaKnown RBP24.06■■□□□ 1.44
SRSF1-209ENST00000585096 ITPK1Q13572 414 aa24.06■■□□□ 1.44
SRSF1-209ENST00000585096 NFATC2IPQ8NCF5 419 aa24.06■■□□□ 1.44
SRSF1-209ENST00000585096 RBM42Q9BTD8 480 aaKnown RBP24.06■■□□□ 1.44
SRSF1-209ENST00000585096 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.04■■□□□ 1.44
SRSF1-209ENST00000585096 PHF14O94880 888 aa24.04■■□□□ 1.44
SRSF1-209ENST00000585096 SSFA2P28290 1259 aa24.04■■□□□ 1.44
SRSF1-209ENST00000585096 KLHL34Q8N239 644 aa24.03■■□□□ 1.44
SRSF1-209ENST00000585096 C4BP0C0L5 1744 aa24.03■■□□□ 1.44
SRSF1-209ENST00000585096 COL3A1P02461 1466 aaPredicted RBP24.02■■□□□ 1.44
SRSF1-209ENST00000585096 GNPATO15228 680 aa24.02■■□□□ 1.44
SRSF1-209ENST00000585096 MTHFSDQ2M296 383 aaKnown RBP24.02■■□□□ 1.44
SRSF1-209ENST00000585096 MSL1Q68DK7 614 aa24.02■■□□□ 1.44
SRSF1-209ENST00000585096 TUBGCP6Q96RT7 1819 aa24■■□□□ 1.43
SRSF1-209ENST00000585096 PPP2R1AP30153 589 aa24■■□□□ 1.43
SRSF1-209ENST00000585096 AMIGO3Q86WK7 504 aa24■■□□□ 1.43
SRSF1-209ENST00000585096 SLC4A9Q96Q91 983 aa24■■□□□ 1.43
SRSF1-209ENST00000585096 SLC52A2Q9HAB3 445 aa24■■□□□ 1.43
SRSF1-209ENST00000585096 NUDCQ9Y266 331 aa24■■□□□ 1.43
SRSF1-209ENST00000585096 RNMTO43148 476 aaKnown RBP23.99■■□□□ 1.43
SRSF1-209ENST00000585096 PTCD1O75127 700 aaKnown RBP23.99■■□□□ 1.43
SRSF1-209ENST00000585096 LGR6Q9HBX8 967 aa23.99■■□□□ 1.43
SRSF1-209ENST00000585096 RC3H1Q5TC82 1133 aaKnown RBP23.98■■□□□ 1.43
SRSF1-209ENST00000585096 RTCBQ9Y3I0 505 aaKnown RBP23.98■■□□□ 1.43
SRSF1-209ENST00000585096 SMIM5Q71RC9 77 aa23.97■■□□□ 1.43
SRSF1-209ENST00000585096 TAF1LQ8IZX4 1826 aa23.97■■□□□ 1.43
SRSF1-209ENST00000585096 GAS2L2Q8NHY3 880 aa23.97■■□□□ 1.43
SRSF1-209ENST00000585096 YY1P25490 414 aa23.96■■□□□ 1.43
SRSF1-209ENST00000585096 TRAPPC3LQ5T215 181 aa23.96■■□□□ 1.43
SRSF1-209ENST00000585096 CNTNAP4Q9C0A0 1308 aa23.95■■□□□ 1.42
SRSF1-209ENST00000585096 COL24A1Q17RW2 1714 aa23.95■■□□□ 1.42
SRSF1-209ENST00000585096 ADRA2BP18089 450 aa23.94■■□□□ 1.42
SRSF1-209ENST00000585096 GNAT3A8MTJ3 354 aa23.92■■□□□ 1.42
SRSF1-209ENST00000585096 RPS6KA4O75676 772 aa23.92■■□□□ 1.42
SRSF1-209ENST00000585096 U2AF1L5P0DN76 240 aaPredicted RBP23.92■■□□□ 1.42
SRSF1-209ENST00000585096 U2AF1Q01081 240 aaKnown RBP eCLIP23.92■■□□□ 1.424e-9■■□□□ 14.5
SRSF1-209ENST00000585096 GPR162Q16538 588 aa23.92■■□□□ 1.42
SRSF1-209ENST00000585096 PRKAR2BP31323 418 aa23.91■■□□□ 1.42
SRSF1-209ENST00000585096 NLGN2Q8NFZ4 835 aa23.91■■□□□ 1.42
SRSF1-209ENST00000585096 CD2APQ9Y5K6 639 aa23.91■■□□□ 1.42
SRSF1-209ENST00000585096 ZNF831Q5JPB2 1677 aa23.91■■□□□ 1.42
SRSF1-209ENST00000585096 RSPH6AQ9H0K4 717 aa23.9■■□□□ 1.42
SRSF1-209ENST00000585096 MRC1P22897 1456 aa23.89■■□□□ 1.42
SRSF1-209ENST00000585096 RFC4P35249 363 aa23.89■■□□□ 1.41
SRSF1-209ENST00000585096 SLC39A6Q13433 755 aa23.89■■□□□ 1.41
SRSF1-209ENST00000585096 ARHGEF1Q92888 912 aaKnown RBP23.89■■□□□ 1.41
SRSF1-209ENST00000585096 UBR3Q6ZT12 1888 aa23.89■■□□□ 1.41
SRSF1-209ENST00000585096 FCHSD2O94868 740 aa23.88■■□□□ 1.41
SRSF1-209ENST00000585096 CRKLP46109 303 aaKnown RBP23.88■■□□□ 1.41
SRSF1-209ENST00000585096 TEFQ10587 303 aa23.88■■□□□ 1.41
SRSF1-209ENST00000585096 PELP1Q8IZL8 1130 aaKnown RBP23.88■■□□□ 1.41
SRSF1-209ENST00000585096 NLGN1Q8N2Q7 840 aa23.88■■□□□ 1.41
SRSF1-209ENST00000585096 PHACTR3Q96KR7 559 aa23.87■■□□□ 1.41
SRSF1-209ENST00000585096 SCN11AQ9UI33 1791 aa23.87■■□□□ 1.41
SRSF1-209ENST00000585096 TTC5Q8N0Z6 440 aa23.86■■□□□ 1.41
SRSF1-209ENST00000585096 IL17REQ8NFR9 667 aa23.86■■□□□ 1.41
SRSF1-209ENST00000585096 DNAJC10Q8IXB1 793 aa23.85■■□□□ 1.41
SRSF1-209ENST00000585096 VSIG10Q8N0Z9 540 aa23.85■■□□□ 1.41
SRSF1-209ENST00000585096 MMP10P09238 476 aa23.84■■□□□ 1.41
SRSF1-209ENST00000585096 INTS5Q6P9B9 1019 aaKnown RBP23.83■■□□□ 1.41
SRSF1-209ENST00000585096 CCDC87Q9NVE4 849 aa23.83■■□□□ 1.41
SRSF1-209ENST00000585096 ADAMTS7Q9UKP4 1686 aa23.83■■□□□ 1.4
SRSF1-209ENST00000585096 GYS1P13807 737 aa23.82■■□□□ 1.4
SRSF1-209ENST00000585096 GRIN3BO60391 1043 aa23.81■■□□□ 1.4
SRSF1-209ENST00000585096 CYP19A1P11511 503 aaPredicted RBP23.81■■□□□ 1.4
SRSF1-209ENST00000585096 RTF1Q92541 710 aaKnown RBP23.81■■□□□ 1.4
SRSF1-209ENST00000585096 COL5A3P25940 1745 aaPredicted RBP23.81■■□□□ 1.4
SRSF1-209ENST00000585096 NEFMP07197 916 aa23.8■■□□□ 1.4
SRSF1-209ENST00000585096 ZNF790Q6PG37 636 aa23.8■■□□□ 1.4
SRSF1-209ENST00000585096 CEMIPQ8WUJ3 1361 aa23.79■■□□□ 1.4
SRSF1-209ENST00000585096 DDX10Q13206 875 aaKnown RBP23.79■■□□□ 1.4
SRSF1-209ENST00000585096 RALBP1Q15311 655 aa23.79■■□□□ 1.4
SRSF1-209ENST00000585096 KCPQ6ZWJ8 1503 aa23.79■■□□□ 1.4
SRSF1-209ENST00000585096 STARD3NLO95772 234 aa23.78■■□□□ 1.4
SRSF1-209ENST00000585096 USP42Q9H9J4 1324 aaKnown RBP23.78■■□□□ 1.4
SRSF1-209ENST00000585096 CICQ96RK0 1608 aaPredicted RBP23.77■■□□□ 1.4
SRSF1-209ENST00000585096 HTATSF1O43719 755 aaKnown RBP23.77■■□□□ 1.4
SRSF1-209ENST00000585096 TEX13AQ9BXU3 409 aaPredicted RBP23.77■■□□□ 1.4
SRSF1-209ENST00000585096 PARP3Q9Y6F1 533 aa23.77■■□□□ 1.4
SRSF1-209ENST00000585096 TJP1Q07157 1748 aa23.76■■□□□ 1.39
SRSF1-209ENST00000585096 BTBD11A6QL63 1104 aa23.76■■□□□ 1.39
SRSF1-209ENST00000585096 ZPR1O75312 459 aa23.76■■□□□ 1.39
SRSF1-209ENST00000585096 YBX3P16989 372 aaKnown RBP eCLIP23.76■■□□□ 1.39
SRSF1-209ENST00000585096 ZNF496Q96IT1 587 aaPredicted RBP23.76■■□□□ 1.39
SRSF1-209ENST00000585096 SRP68Q9UHB9 627 aaKnown RBP23.76■■□□□ 1.39
SRSF1-209ENST00000585096 SOS1Q07889 1333 aaPredicted RBP23.76■■□□□ 1.39
SRSF1-209ENST00000585096 FMNL2Q96PY5 1086 aa23.75■■□□□ 1.39
SRSF1-209ENST00000585096 PNNQ9H307 717 aaKnown RBP23.75■■□□□ 1.39
SRSF1-209ENST00000585096 ZBTB1Q9Y2K1 713 aa23.74■■□□□ 1.39
SRSF1-209ENST00000585096 HEG1Q9ULI3 1381 aa23.74■■□□□ 1.39
SRSF1-209ENST00000585096 UTRNP46939 3433 aa23.74■■□□□ 1.39
SRSF1-209ENST00000585096 FKBP8Q14318 412 aa23.73■■□□□ 1.39
SRSF1-209ENST00000585096 MCM10Q7L590 875 aa23.73■■□□□ 1.39
SRSF1-209ENST00000585096 CANXP27824 592 aaKnown RBP23.72■■□□□ 1.39
SRSF1-209ENST00000585096 TGFB2P61812 414 aa23.72■■□□□ 1.39
SRSF1-209ENST00000585096 MYH14Q7Z406 1995 aaKnown RBP23.71■■□□□ 1.39
SRSF1-209ENST00000585096 USPL1Q5W0Q7 1092 aa23.71■■□□□ 1.39
SRSF1-209ENST00000585096 NARFQ9UHQ1 456 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms