RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 SCN11AQ9UI33 1791 aa19.02■□□□□ 0.63
CDK5RAP3-236ENST00000584991 VAMP4O75379 141 aa19.01■□□□□ 0.63
CDK5RAP3-236ENST00000584991 TEFQ10587 303 aa19.01■□□□□ 0.63
CDK5RAP3-236ENST00000584991 TWISTNBQ3B726 338 aaPredicted RBP19.01■□□□□ 0.63
CDK5RAP3-236ENST00000584991 CLUAP1Q96AJ1 413 aa19.01■□□□□ 0.63
CDK5RAP3-236ENST00000584991 ADAMTS7Q9UKP4 1686 aa19.01■□□□□ 0.63
CDK5RAP3-236ENST00000584991 KRT24Q2M2I5 525 aa19.01■□□□□ 0.63
CDK5RAP3-236ENST00000584991 C8orf37Q96NL8 207 aa19.01■□□□□ 0.63
CDK5RAP3-236ENST00000584991 LRP6O75581 1613 aa19■□□□□ 0.63
CDK5RAP3-236ENST00000584991 SSH1Q8WYL5 1049 aa19■□□□□ 0.63
CDK5RAP3-236ENST00000584991 BABAM1Q9NWV8 329 aa19■□□□□ 0.63
CDK5RAP3-236ENST00000584991 PCDH11XQ9BZA7 1347 aa19■□□□□ 0.63
CDK5RAP3-236ENST00000584991 PCDH11YQ9BZA8 1340 aa19■□□□□ 0.63
CDK5RAP3-236ENST00000584991 KDM6AO15550 1401 aaPredicted RBP18.99■□□□□ 0.63
CDK5RAP3-236ENST00000584991 SHANK3Q9BYB0 1731 aa18.99■□□□□ 0.63
CDK5RAP3-236ENST00000584991 NGLY1Q96IV0 654 aa18.99■□□□□ 0.63
CDK5RAP3-236ENST00000584991 SMC4Q9NTJ3 1288 aa18.99■□□□□ 0.63
CDK5RAP3-236ENST00000584991 SIPA1L3O60292 1781 aaPredicted RBP18.98■□□□□ 0.63
CDK5RAP3-236ENST00000584991 FRAT1Q92837 279 aaPredicted RBP18.98■□□□□ 0.63
CDK5RAP3-236ENST00000584991 ZNF428Q96B54 188 aa18.98■□□□□ 0.63
CDK5RAP3-236ENST00000584991 DAXXQ9UER7 740 aaPredicted RBP18.98■□□□□ 0.63
CDK5RAP3-236ENST00000584991 WNK3Q9BYP7 1800 aa18.97■□□□□ 0.63
CDK5RAP3-236ENST00000584991 HSP90AB1P08238 724 aaKnown RBP18.97■□□□□ 0.63
CDK5RAP3-236ENST00000584991 CANXP27824 592 aaKnown RBP18.97■□□□□ 0.63
CDK5RAP3-236ENST00000584991 ALDH1L2Q3SY69 923 aa18.97■□□□□ 0.63
CDK5RAP3-236ENST00000584991 KDM3BQ7LBC6 1761 aa18.97■□□□□ 0.63
CDK5RAP3-236ENST00000584991 DISP2A7MBM2 1401 aa18.97■□□□□ 0.63
CDK5RAP3-236ENST00000584991 SPATA31A1Q5TZJ5 1347 aa18.97■□□□□ 0.63
CDK5RAP3-236ENST00000584991 BTBD11A6QL63 1104 aa18.97■□□□□ 0.63
CDK5RAP3-236ENST00000584991 UNC5CLQ8IV45 518 aa18.97■□□□□ 0.63
CDK5RAP3-236ENST00000584991 DDX54Q8TDD1 881 aaKnown RBP18.97■□□□□ 0.63
CDK5RAP3-236ENST00000584991 DCAF5Q96JK2 942 aa18.97■□□□□ 0.63
CDK5RAP3-236ENST00000584991 CCDC9Q9Y3X0 531 aaKnown RBP18.96■□□□□ 0.63
CDK5RAP3-236ENST00000584991 SLC52A2Q9HAB3 445 aa18.94■□□□□ 0.62
CDK5RAP3-236ENST00000584991 SPATA31A5Q5VU36 1347 aa18.94■□□□□ 0.62
CDK5RAP3-236ENST00000584991 SPATA31A7Q8IWB4 1347 aa18.94■□□□□ 0.62
CDK5RAP3-236ENST00000584991 BCL9LQ86UU0 1499 aa18.94■□□□□ 0.62
CDK5RAP3-236ENST00000584991 MEX3CQ5U5Q3 659 aaKnown RBP18.94■□□□□ 0.62
CDK5RAP3-236ENST00000584991 FNBP4Q8N3X1 1017 aaPredicted RBP18.94■□□□□ 0.62
CDK5RAP3-236ENST00000584991 THRAP3Q9Y2W1 955 aaKnown RBP18.94■□□□□ 0.62
CDK5RAP3-236ENST00000584991 KCNQ3O43525 872 aa18.93■□□□□ 0.62
CDK5RAP3-236ENST00000584991 NFATC2IPQ8NCF5 419 aa18.93■□□□□ 0.62
CDK5RAP3-236ENST00000584991 IGHDP01880 384 aa18.92■□□□□ 0.62
CDK5RAP3-236ENST00000584991 NKX1-1Q15270 411 aaPredicted RBP18.92■□□□□ 0.62
CDK5RAP3-236ENST00000584991 MRPL50Q8N5N7 158 aaKnown RBP18.92■□□□□ 0.62
CDK5RAP3-236ENST00000584991 EXOC5O00471 708 aa18.91■□□□□ 0.62
CDK5RAP3-236ENST00000584991 EIF4A1P60842 406 aaKnown RBP18.91■□□□□ 0.62
CDK5RAP3-236ENST00000584991 SKAP1Q86WV1 359 aa18.91■□□□□ 0.62
CDK5RAP3-236ENST00000584991 CDCA7Q9BWT1 371 aaPredicted RBP18.91■□□□□ 0.62
CDK5RAP3-236ENST00000584991 NOB1Q9ULX3 412 aaKnown RBP18.91■□□□□ 0.62
CDK5RAP3-236ENST00000584991 TNNQ9UQP3 1299 aa18.91■□□□□ 0.62
CDK5RAP3-236ENST00000584991 MRC1P22897 1456 aa18.91■□□□□ 0.62
CDK5RAP3-236ENST00000584991 RGS3P49796 1198 aa18.9■□□□□ 0.62
CDK5RAP3-236ENST00000584991 BRPF1P55201 1214 aaPredicted RBP18.9■□□□□ 0.62
CDK5RAP3-236ENST00000584991 CABP4P57796 275 aa18.9■□□□□ 0.62
CDK5RAP3-236ENST00000584991 ZKSCAN2Q63HK3 967 aa18.9■□□□□ 0.62
CDK5RAP3-236ENST00000584991 USP21Q9UK80 565 aa18.9■□□□□ 0.62
CDK5RAP3-236ENST00000584991 COG6Q9Y2V7 657 aa18.9■□□□□ 0.62
CDK5RAP3-236ENST00000584991 KIF16BQ96L93 1317 aa18.9■□□□□ 0.62
CDK5RAP3-236ENST00000584991 VPS72Q15906 364 aa18.9■□□□□ 0.62
CDK5RAP3-236ENST00000584991 PANK1Q8TE04 598 aa18.9■□□□□ 0.62
CDK5RAP3-236ENST00000584991 RWDD1Q9H446 243 aaPredicted RBP18.89■□□□□ 0.61
CDK5RAP3-236ENST00000584991 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.89■□□□□ 0.61
CDK5RAP3-236ENST00000584991 SLC39A6Q13433 755 aa18.88■□□□□ 0.61
CDK5RAP3-236ENST00000584991 ERVV-2B6SEH9 535 aa18.88■□□□□ 0.61
CDK5RAP3-236ENST00000584991 BARGINQ6ZT62 677 aa18.88■□□□□ 0.61
CDK5RAP3-236ENST00000584991 TNS2Q63HR2 1409 aa18.87■□□□□ 0.61
CDK5RAP3-236ENST00000584991 SOS1Q07889 1333 aaPredicted RBP18.87■□□□□ 0.61
CDK5RAP3-236ENST00000584991 IPO8O15397 1037 aaKnown RBP18.87■□□□□ 0.61
CDK5RAP3-236ENST00000584991 ATF7IPQ6VMQ6 1270 aa18.87■□□□□ 0.61
CDK5RAP3-236ENST00000584991 TOGARAM1Q9Y4F4 1720 aa18.87■□□□□ 0.61
CDK5RAP3-236ENST00000584991 RLBP1P12271 317 aa18.86■□□□□ 0.61
CDK5RAP3-236ENST00000584991 TRIM27P14373 513 aa18.86■□□□□ 0.61
CDK5RAP3-236ENST00000584991 DDB1Q16531 1140 aa18.86■□□□□ 0.61
CDK5RAP3-236ENST00000584991 ZNF790Q6PG37 636 aa18.86■□□□□ 0.61
CDK5RAP3-236ENST00000584991 AFF2P51816 1311 aa18.86■□□□□ 0.61
CDK5RAP3-236ENST00000584991 NECTIN2Q92692 538 aa18.86■□□□□ 0.61
CDK5RAP3-236ENST00000584991 FAM98CQ17RN3 349 aaKnown RBP18.85■□□□□ 0.61
CDK5RAP3-236ENST00000584991 DZIP1LQ8IYY4 767 aaKnown RBP18.85■□□□□ 0.61
CDK5RAP3-236ENST00000584991 SLC4A2P04920 1241 aa18.84■□□□□ 0.61
CDK5RAP3-236ENST00000584991 MVPQ14764 893 aaKnown RBP18.84■□□□□ 0.61
CDK5RAP3-236ENST00000584991 CCDC30Q5VVM6 783 aa18.84■□□□□ 0.61
CDK5RAP3-236ENST00000584991 FTSJ3Q8IY81 847 aaKnown RBP18.84■□□□□ 0.61
CDK5RAP3-236ENST00000584991 KAT6BQ8WYB5 2073 aa18.84■□□□□ 0.61
CDK5RAP3-236ENST00000584991 HOXB7P09629 217 aa18.84■□□□□ 0.61
CDK5RAP3-236ENST00000584991 HEG1Q9ULI3 1381 aa18.83■□□□□ 0.61
CDK5RAP3-236ENST00000584991 EIF2S2P20042 333 aaKnown RBP18.83■□□□□ 0.6
CDK5RAP3-236ENST00000584991 HDGFL1Q5TGJ6 251 aa18.83■□□□□ 0.6
CDK5RAP3-236ENST00000584991 TTC5Q8N0Z6 440 aa18.83■□□□□ 0.6
CDK5RAP3-236ENST00000584991 ARHGAP45Q92619 1136 aa18.83■□□□□ 0.6
CDK5RAP3-236ENST00000584991 STK31Q9BXU1 1019 aa18.83■□□□□ 0.6
CDK5RAP3-236ENST00000584991 CACNA1FO60840 1977 aa18.83■□□□□ 0.6
CDK5RAP3-236ENST00000584991 ITGB4P16144 1822 aa18.83■□□□□ 0.6
CDK5RAP3-236ENST00000584991 GIGYF1O75420 1035 aaPredicted RBP18.82■□□□□ 0.6
CDK5RAP3-236ENST00000584991 PRAMEF22A3QJZ6 481 aa18.81■□□□□ 0.6
CDK5RAP3-236ENST00000584991 BECN1Q14457 450 aa18.81■□□□□ 0.6
CDK5RAP3-236ENST00000584991 ZNF496Q96IT1 587 aaPredicted RBP18.81■□□□□ 0.6
CDK5RAP3-236ENST00000584991 TMOD3Q9NYL9 352 aa18.81■□□□□ 0.6
CDK5RAP3-236ENST00000584991 NFKBIBQ15653 356 aa18.8■□□□□ 0.6
CDK5RAP3-236ENST00000584991 UPF2Q9HAU5 1272 aaKnown RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms