RNA–Protein interactions for RNA: ENST00000584951.1

DDX42-219, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 591 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-219ENST00000584951 ASAP1Q9ULH1 1129 aa17.5■□□□□ 0.39
DDX42-219ENST00000584951 EMILIN1Q9Y6C2 1016 aa17.5■□□□□ 0.39
DDX42-219ENST00000584951 N4BP2Q86UW6 1770 aaPredicted RBP17.5■□□□□ 0.39
DDX42-219ENST00000584951 ATP6V1AP38606 617 aa17.49■□□□□ 0.39
DDX42-219ENST00000584951 PLEKHG2Q9H7P9 1386 aa17.49■□□□□ 0.39
DDX42-219ENST00000584951 BRCA1P38398 1863 aaKnown RBP17.48■□□□□ 0.39
DDX42-219ENST00000584951 CDCA8Q53HL2 280 aa17.48■□□□□ 0.39
DDX42-219ENST00000584951 KDRP35968 1356 aa17.48■□□□□ 0.39
DDX42-219ENST00000584951 WASHC2AQ641Q2 1341 aa17.47■□□□□ 0.39
DDX42-219ENST00000584951 PHKG2P15735 406 aa17.47■□□□□ 0.39
DDX42-219ENST00000584951 IFNL2Q8IZJ0 200 aa17.47■□□□□ 0.39
DDX42-219ENST00000584951 NLGN1Q8N2Q7 840 aa17.47■□□□□ 0.39
DDX42-219ENST00000584951 ATG3Q9NT62 314 aa17.47■□□□□ 0.39
DDX42-219ENST00000584951 ADRA2BP18089 450 aa17.46■□□□□ 0.39
DDX42-219ENST00000584951 EYA1Q99502 592 aa17.46■□□□□ 0.39
DDX42-219ENST00000584951 CARD14Q9BXL6 1004 aa17.46■□□□□ 0.39
DDX42-219ENST00000584951 BCS1LQ9Y276 419 aa17.46■□□□□ 0.39
DDX42-219ENST00000584951 RTCBQ9Y3I0 505 aaKnown RBP17.46■□□□□ 0.39
DDX42-219ENST00000584951 C4AP0C0L4 1744 aa17.46■□□□□ 0.39
DDX42-219ENST00000584951 WDR90Q96KV7 1748 aa17.46■□□□□ 0.39
DDX42-219ENST00000584951 COL5A3P25940 1745 aaPredicted RBP17.45■□□□□ 0.38
DDX42-219ENST00000584951 A0A0G2JLW4 131 aa17.45■□□□□ 0.38
DDX42-219ENST00000584951 TRAPPC3LQ5T215 181 aa17.45■□□□□ 0.38
DDX42-219ENST00000584951 RC3H1Q5TC82 1133 aaKnown RBP17.45■□□□□ 0.38
DDX42-219ENST00000584951 ARFGEF1Q9Y6D6 1849 aa17.44■□□□□ 0.38
DDX42-219ENST00000584951 RBM46Q8TBY0 533 aaKnown RBP17.44■□□□□ 0.38
DDX42-219ENST00000584951 NMRK2Q9NPI5 230 aa17.44■□□□□ 0.38
DDX42-219ENST00000584951 CCDC87Q9NVE4 849 aa17.44■□□□□ 0.38
DDX42-219ENST00000584951 ARHGAP27Q6ZUM4 889 aa17.43■□□□□ 0.38
DDX42-219ENST00000584951 CNTNAP4Q9C0A0 1308 aa17.43■□□□□ 0.38
DDX42-219ENST00000584951 PPM1GO15355 546 aaPredicted RBP17.42■□□□□ 0.38
DDX42-219ENST00000584951 GYS1P13807 737 aa17.42■□□□□ 0.38
DDX42-219ENST00000584951 DPEP1P16444 411 aa17.42■□□□□ 0.38
DDX42-219ENST00000584951 ARHGEF1Q92888 912 aaKnown RBP17.42■□□□□ 0.38
DDX42-219ENST00000584951 SLC4A9Q96Q91 983 aa17.42■□□□□ 0.38
DDX42-219ENST00000584951 ERVV-2B6SEH9 535 aa17.41■□□□□ 0.38
DDX42-219ENST00000584951 FCHSD2O94868 740 aa17.41■□□□□ 0.38
DDX42-219ENST00000584951 KCNA3P22001 575 aa17.41■□□□□ 0.38
DDX42-219ENST00000584951 RPS6KA4O75676 772 aa17.4■□□□□ 0.38
DDX42-219ENST00000584951 FSTL1Q12841 308 aa17.4■□□□□ 0.38
DDX42-219ENST00000584951 JMYQ8N9B5 988 aa17.4■□□□□ 0.38
DDX42-219ENST00000584951 C9orf131Q5VYM1 1079 aa17.39■□□□□ 0.37
DDX42-219ENST00000584951 KLRG1Q96E93 195 aa17.39■□□□□ 0.37
DDX42-219ENST00000584951 POLKQ9UBT6 870 aa17.39■□□□□ 0.37
DDX42-219ENST00000584951 PARP3Q9Y6F1 533 aa17.39■□□□□ 0.37
DDX42-219ENST00000584951 HSP90AB1P08238 724 aaKnown RBP17.38■□□□□ 0.37
DDX42-219ENST00000584951 RFC4P35249 363 aa17.38■□□□□ 0.37
DDX42-219ENST00000584951 DCAF5Q96JK2 942 aa17.38■□□□□ 0.37
DDX42-219ENST00000584951 MYH14Q7Z406 1995 aaKnown RBP17.38■□□□□ 0.37
DDX42-219ENST00000584951 C16orf71Q8IYS4 520 aaPredicted RBP17.37■□□□□ 0.37
DDX42-219ENST00000584951 RBM42Q9BTD8 480 aaKnown RBP17.37■□□□□ 0.37
DDX42-219ENST00000584951 PIM2Q9P1W9 311 aa17.37■□□□□ 0.37
DDX42-219ENST00000584951 TNRC6CQ9HCJ0 1690 aaKnown RBP17.36■□□□□ 0.37
DDX42-219ENST00000584951 EIF4A2Q14240 407 aaKnown RBP17.36■□□□□ 0.37
DDX42-219ENST00000584951 KDM2BQ8NHM5 1336 aa17.36■□□□□ 0.37
DDX42-219ENST00000584951 KCPQ6ZWJ8 1503 aa17.35■□□□□ 0.37
DDX42-219ENST00000584951 KDM6AO15550 1401 aaPredicted RBP17.34■□□□□ 0.37
DDX42-219ENST00000584951 SBF1O95248 1867 aa17.34■□□□□ 0.37
DDX42-219ENST00000584951 DALRD3Q5D0E6 543 aaKnown RBP17.34■□□□□ 0.37
DDX42-219ENST00000584951 COL13A1Q5TAT6 717 aaPredicted RBP17.33■□□□□ 0.36
DDX42-219ENST00000584951 USP42Q9H9J4 1324 aaKnown RBP17.32■□□□□ 0.36
DDX42-219ENST00000584951 HTRA3P83110 453 aa17.32■□□□□ 0.36
DDX42-219ENST00000584951 PLEKHO1Q53GL0 409 aaPredicted RBP17.32■□□□□ 0.36
DDX42-219ENST00000584951 RNF181Q9P0P0 153 aa17.32■□□□□ 0.36
DDX42-219ENST00000584951 ZC3H4Q9UPT8 1303 aaKnown RBP17.31■□□□□ 0.36
DDX42-219ENST00000584951 CRKLP46109 303 aaKnown RBP17.31■□□□□ 0.36
DDX42-219ENST00000584951 CABP4P57796 275 aa17.31■□□□□ 0.36
DDX42-219ENST00000584951 DDR1Q08345 913 aa17.31■□□□□ 0.36
DDX42-219ENST00000584951 AMOTQ4VCS5 1084 aa17.31■□□□□ 0.36
DDX42-219ENST00000584951 ADAMTS7Q9UKP4 1686 aa17.31■□□□□ 0.36
DDX42-219ENST00000584951 TJP1Q07157 1748 aa17.3■□□□□ 0.36
DDX42-219ENST00000584951 FKBP8Q14318 412 aa17.3■□□□□ 0.36
DDX42-219ENST00000584951 RRAGCQ9HB90 399 aa17.3■□□□□ 0.36
DDX42-219ENST00000584951 ZNF530Q6P9A1 599 aaPredicted RBP17.29■□□□□ 0.36
DDX42-219ENST00000584951 SMC1BQ8NDV3 1235 aa17.29■□□□□ 0.36
DDX42-219ENST00000584951 SRP68Q9UHB9 627 aaKnown RBP17.29■□□□□ 0.36
DDX42-219ENST00000584951 POLRMTO00411 1230 aaKnown RBP17.28■□□□□ 0.36
DDX42-219ENST00000584951 TM4SF1P30408 202 aa17.28■□□□□ 0.36
DDX42-219ENST00000584951 PTCD1O75127 700 aaKnown RBP17.27■□□□□ 0.36
DDX42-219ENST00000584951 CHRNA5P30532 468 aa17.27■□□□□ 0.36
DDX42-219ENST00000584951 MTHFSP49914 203 aa17.27■□□□□ 0.36
DDX42-219ENST00000584951 NRXN2Q9P2S2 1712 aa17.25■□□□□ 0.35
DDX42-219ENST00000584951 C1orf141Q5JVX7 400 aa17.25■□□□□ 0.35
DDX42-219ENST00000584951 INTS5Q6P9B9 1019 aaKnown RBP17.25■□□□□ 0.35
DDX42-219ENST00000584951 TNS4Q8IZW8 715 aa17.25■□□□□ 0.35
DDX42-219ENST00000584951 NFATC2IPQ8NCF5 419 aa17.25■□□□□ 0.35
DDX42-219ENST00000584951 SCN11AQ9UI33 1791 aa17.25■□□□□ 0.35
DDX42-219ENST00000584951 DLEC1Q9Y238 1755 aa17.25■□□□□ 0.35
DDX42-219ENST00000584951 TNNT2P45379 298 aaPredicted RBP17.24■□□□□ 0.35
DDX42-219ENST00000584951 PRELPP51888 382 aa17.24■□□□□ 0.35
DDX42-219ENST00000584951 AFDNP55196 1824 aaKnown RBP17.24■□□□□ 0.35
DDX42-219ENST00000584951 GLTPD2A6NH11 291 aa17.23■□□□□ 0.35
DDX42-219ENST00000584951 ZPR1O75312 459 aa17.22■□□□□ 0.35
DDX42-219ENST00000584951 VEGFAP15692 232 aaPredicted RBP17.22■□□□□ 0.35
DDX42-219ENST00000584951 LMNB1P20700 586 aa17.22■□□□□ 0.35
DDX42-219ENST00000584951 RASSF7Q02833 373 aa17.22■□□□□ 0.35
DDX42-219ENST00000584951 SOS1Q07889 1333 aaPredicted RBP17.21■□□□□ 0.35
DDX42-219ENST00000584951 USPL1Q5W0Q7 1092 aa17.21■□□□□ 0.35
DDX42-219ENST00000584951 AEBP1Q8IUX7 1158 aa17.21■□□□□ 0.35
DDX42-219ENST00000584951 PCNTO95613 3336 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms