RNA–Protein interactions for RNA: ENST00000584913.1

CSNK1D-225, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 295 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-225ENST00000584913 CABP4P57796 275 aa22.5■■□□□ 1.19
CSNK1D-225ENST00000584913 ASAP1Q9ULH1 1129 aa22.5■■□□□ 1.19
CSNK1D-225ENST00000584913 KCNQ4P56696 695 aa22.49■■□□□ 1.19
CSNK1D-225ENST00000584913 GAS2L2Q8NHY3 880 aa22.49■■□□□ 1.19
CSNK1D-225ENST00000584913 UBR3Q6ZT12 1888 aa22.48■■□□□ 1.19
CSNK1D-225ENST00000584913 U2SURPO15042 1029 aaKnown RBP22.47■■□□□ 1.19
CSNK1D-225ENST00000584913 SSFA2P28290 1259 aa22.47■■□□□ 1.19
CSNK1D-225ENST00000584913 MTHFSDQ2M296 383 aaKnown RBP22.47■■□□□ 1.19
CSNK1D-225ENST00000584913 COL5A3P25940 1745 aaPredicted RBP22.47■■□□□ 1.19
CSNK1D-225ENST00000584913 AK7Q96M32 723 aa22.46■■□□□ 1.19
CSNK1D-225ENST00000584913 SLC52A2Q9HAB3 445 aa22.46■■□□□ 1.19
CSNK1D-225ENST00000584913 ATP6V1AP38606 617 aa22.45■■□□□ 1.18
CSNK1D-225ENST00000584913 ATF5Q9Y2D1 282 aaPredicted RBP22.45■■□□□ 1.18
CSNK1D-225ENST00000584913 VIRMAQ69YN4 1812 aaKnown RBP22.45■■□□□ 1.18
CSNK1D-225ENST00000584913 RNMTO43148 476 aaKnown RBP22.44■■□□□ 1.18
CSNK1D-225ENST00000584913 FCHSD2O94868 740 aa22.44■■□□□ 1.18
CSNK1D-225ENST00000584913 POLD1P28340 1107 aa22.44■■□□□ 1.18
CSNK1D-225ENST00000584913 RALBP1Q15311 655 aa22.44■■□□□ 1.18
CSNK1D-225ENST00000584913 RSPH6AQ9H0K4 717 aa22.44■■□□□ 1.18
CSNK1D-225ENST00000584913 CNTNAP4Q9C0A0 1308 aa22.43■■□□□ 1.18
CSNK1D-225ENST00000584913 RC3H1Q5TC82 1133 aaKnown RBP22.43■■□□□ 1.18
CSNK1D-225ENST00000584913 NFATC2IPQ8NCF5 419 aa22.43■■□□□ 1.18
CSNK1D-225ENST00000584913 ITPK1Q13572 414 aa22.42■■□□□ 1.18
CSNK1D-225ENST00000584913 CNGB1Q14028 1251 aaPredicted RBP22.42■■□□□ 1.18
CSNK1D-225ENST00000584913 COL23A1Q86Y22 540 aaPredicted RBP22.42■■□□□ 1.18
CSNK1D-225ENST00000584913 LINC00116Q8NCU8 138 aa22.42■■□□□ 1.18
CSNK1D-225ENST00000584913 ARXQ96QS3 562 aa22.42■■□□□ 1.18
CSNK1D-225ENST00000584913 CEMIPQ8WUJ3 1361 aa22.4■■□□□ 1.18
CSNK1D-225ENST00000584913 GNAT3A8MTJ3 354 aa22.4■■□□□ 1.18
CSNK1D-225ENST00000584913 ADRA2BP18089 450 aa22.4■■□□□ 1.18
CSNK1D-225ENST00000584913 UBR2Q8IWV8 1755 aa22.4■■□□□ 1.18
CSNK1D-225ENST00000584913 PRKAR2BP31323 418 aa22.39■■□□□ 1.17
CSNK1D-225ENST00000584913 SLC4A9Q96Q91 983 aa22.39■■□□□ 1.17
CSNK1D-225ENST00000584913 TJP1Q07157 1748 aa22.39■■□□□ 1.17
CSNK1D-225ENST00000584913 SIPA1L3O60292 1781 aaPredicted RBP22.38■■□□□ 1.17
CSNK1D-225ENST00000584913 U2AF1L5P0DN76 240 aaPredicted RBP22.38■■□□□ 1.17
CSNK1D-225ENST00000584913 U2AF1Q01081 240 aaKnown RBP eCLIP22.38■■□□□ 1.172e-6■■□□□ 12.1
CSNK1D-225ENST00000584913 RBM42Q9BTD8 480 aaKnown RBP22.38■■□□□ 1.17
CSNK1D-225ENST00000584913 LGR6Q9HBX8 967 aa22.38■■□□□ 1.17
CSNK1D-225ENST00000584913 KCPQ6ZWJ8 1503 aa22.37■■□□□ 1.17
CSNK1D-225ENST00000584913 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.37■■□□□ 1.17
CSNK1D-225ENST00000584913 VSIG10Q8N0Z9 540 aa22.37■■□□□ 1.17
CSNK1D-225ENST00000584913 FHDC1Q9C0D6 1143 aaPredicted RBP22.36■■□□□ 1.17
CSNK1D-225ENST00000584913 GNPATO15228 680 aa22.35■■□□□ 1.17
CSNK1D-225ENST00000584913 HTATSF1O43719 755 aaKnown RBP22.35■■□□□ 1.17
CSNK1D-225ENST00000584913 SYT17Q9BSW7 474 aa22.35■■□□□ 1.17
CSNK1D-225ENST00000584913 RTCBQ9Y3I0 505 aaKnown RBP22.35■■□□□ 1.17
CSNK1D-225ENST00000584913 DCAF8L1A6NGE4 600 aa22.34■■□□□ 1.17
CSNK1D-225ENST00000584913 MSH5O43196 834 aa22.34■■□□□ 1.17
CSNK1D-225ENST00000584913 PNNQ9H307 717 aaKnown RBP22.34■■□□□ 1.17
CSNK1D-225ENST00000584913 MYBBP1AQ9BQG0 1328 aaKnown RBP22.33■■□□□ 1.17
CSNK1D-225ENST00000584913 RPS6KA4O75676 772 aa22.33■■□□□ 1.17
CSNK1D-225ENST00000584913 TEFQ10587 303 aa22.33■■□□□ 1.17
CSNK1D-225ENST00000584913 DDX10Q13206 875 aaKnown RBP22.33■■□□□ 1.17
CSNK1D-225ENST00000584913 PHACTR3Q96KR7 559 aa22.33■■□□□ 1.17
CSNK1D-225ENST00000584913 PTCD1O75127 700 aaKnown RBP22.32■■□□□ 1.16
CSNK1D-225ENST00000584913 AMIGO3Q86WK7 504 aa22.32■■□□□ 1.16
CSNK1D-225ENST00000584913 IL17REQ8NFR9 667 aa22.32■■□□□ 1.16
CSNK1D-225ENST00000584913 NEFMP07197 916 aa22.31■■□□□ 1.16
CSNK1D-225ENST00000584913 TRAPPC3LQ5T215 181 aa22.3■■□□□ 1.16
CSNK1D-225ENST00000584913 C4AP0C0L4 1744 aa22.29■■□□□ 1.16
CSNK1D-225ENST00000584913 MYH14Q7Z406 1995 aaKnown RBP22.29■■□□□ 1.16
CSNK1D-225ENST00000584913 PHF14O94880 888 aa22.29■■□□□ 1.16
CSNK1D-225ENST00000584913 CRKLP46109 303 aaKnown RBP22.29■■□□□ 1.16
CSNK1D-225ENST00000584913 TTC5Q8N0Z6 440 aa22.29■■□□□ 1.16
CSNK1D-225ENST00000584913 RTF1Q92541 710 aaKnown RBP22.28■■□□□ 1.16
CSNK1D-225ENST00000584913 ZNF790Q6PG37 636 aa22.27■■□□□ 1.16
CSNK1D-225ENST00000584913 PLEKHF1Q96S99 279 aa22.27■■□□□ 1.16
CSNK1D-225ENST00000584913 TEX13AQ9BXU3 409 aaPredicted RBP22.27■■□□□ 1.16
CSNK1D-225ENST00000584913 CD2APQ9Y5K6 639 aa22.27■■□□□ 1.16
CSNK1D-225ENST00000584913 NLGN1Q8N2Q7 840 aa22.26■■□□□ 1.15
CSNK1D-225ENST00000584913 CYP19A1P11511 503 aaPredicted RBP22.25■■□□□ 1.15
CSNK1D-225ENST00000584913 SLC39A6Q13433 755 aa22.25■■□□□ 1.15
CSNK1D-225ENST00000584913 CCDC87Q9NVE4 849 aa22.25■■□□□ 1.15
CSNK1D-225ENST00000584913 HEG1Q9ULI3 1381 aa22.25■■□□□ 1.15
CSNK1D-225ENST00000584913 MSL1Q68DK7 614 aa22.24■■□□□ 1.15
CSNK1D-225ENST00000584913 INTS5Q6P9B9 1019 aaKnown RBP22.24■■□□□ 1.15
CSNK1D-225ENST00000584913 DNAJC10Q8IXB1 793 aa22.24■■□□□ 1.15
CSNK1D-225ENST00000584913 ARHGEF1Q92888 912 aaKnown RBP22.24■■□□□ 1.15
CSNK1D-225ENST00000584913 RFC4P35249 363 aa22.23■■□□□ 1.15
CSNK1D-225ENST00000584913 FMNL2Q96PY5 1086 aa22.22■■□□□ 1.15
CSNK1D-225ENST00000584913 PRKRIP1Q9H875 184 aaPredicted RBP22.22■■□□□ 1.15
CSNK1D-225ENST00000584913 SOS1Q07889 1333 aaPredicted RBP22.22■■□□□ 1.15
CSNK1D-225ENST00000584913 MAPK8IP3Q9UPT6 1336 aa22.22■■□□□ 1.15
CSNK1D-225ENST00000584913 BTBD11A6QL63 1104 aa22.21■■□□□ 1.15
CSNK1D-225ENST00000584913 STARD3NLO95772 234 aa22.21■■□□□ 1.15
CSNK1D-225ENST00000584913 GYS1P13807 737 aa22.21■■□□□ 1.15
CSNK1D-225ENST00000584913 NFE2L2Q16236 605 aa22.21■■□□□ 1.15
CSNK1D-225ENST00000584913 KIF13BQ9NQT8 1826 aa22.21■■□□□ 1.15
CSNK1D-225ENST00000584913 USP42Q9H9J4 1324 aaKnown RBP22.21■■□□□ 1.15
CSNK1D-225ENST00000584913 DLG5Q8TDM6 1919 aa22.2■■□□□ 1.14
CSNK1D-225ENST00000584913 ZNF496Q96IT1 587 aaPredicted RBP22.2■■□□□ 1.14
CSNK1D-225ENST00000584913 PNISRQ8TF01 805 aaKnown RBP22.19■■□□□ 1.14
CSNK1D-225ENST00000584913 COL15A1P39059 1388 aa22.19■■□□□ 1.14
CSNK1D-225ENST00000584913 SMIM5Q71RC9 77 aa22.17■■□□□ 1.14
CSNK1D-225ENST00000584913 MCM10Q7L590 875 aa22.17■■□□□ 1.14
CSNK1D-225ENST00000584913 C10orf71Q711Q0 1435 aa22.16■■□□□ 1.14
CSNK1D-225ENST00000584913 MMP10P09238 476 aa22.16■■□□□ 1.14
CSNK1D-225ENST00000584913 TAF7Q15545 349 aaPredicted RBP22.16■■□□□ 1.14
CSNK1D-225ENST00000584913 ZBTB1Q9Y2K1 713 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms