RNA–Protein interactions for RNA: ENST00000584888.1

ERBB2-221, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-221ENST00000584888 ITPK1Q13572 414 aa24.15■■□□□ 1.46
ERBB2-221ENST00000584888 AMOTQ4VCS5 1084 aa24.15■■□□□ 1.46
ERBB2-221ENST00000584888 AEBP1Q8IUX7 1158 aa24.15■■□□□ 1.46
ERBB2-221ENST00000584888 DCAF5Q96JK2 942 aa24.15■■□□□ 1.46
ERBB2-221ENST00000584888 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.14■■□□□ 1.45
ERBB2-221ENST00000584888 PHF14O94880 888 aa24.14■■□□□ 1.45
ERBB2-221ENST00000584888 ZNF530Q6P9A1 599 aaPredicted RBP24.14■■□□□ 1.45
ERBB2-221ENST00000584888 SULT6B1Q6IMI4 303 aa24.13■■□□□ 1.45
ERBB2-221ENST00000584888 PELP1Q8IZL8 1130 aaKnown RBP24.13■■□□□ 1.45
ERBB2-221ENST00000584888 COL3A1P02461 1466 aaPredicted RBP24.13■■□□□ 1.45
ERBB2-221ENST00000584888 ZNF784Q8NCA9 323 aaPredicted RBP24.12■■□□□ 1.45
ERBB2-221ENST00000584888 SSFA2P28290 1259 aa24.11■■□□□ 1.45
ERBB2-221ENST00000584888 UTRNP46939 3433 aa24.11■■□□□ 1.45
ERBB2-221ENST00000584888 CNGB1Q14028 1251 aaPredicted RBP24.1■■□□□ 1.45
ERBB2-221ENST00000584888 UBR3Q6ZT12 1888 aa24.09■■□□□ 1.45
ERBB2-221ENST00000584888 GNPATO15228 680 aa24.09■■□□□ 1.45
ERBB2-221ENST00000584888 DIAPH1O60610 1272 aaKnown RBP24.09■■□□□ 1.45
ERBB2-221ENST00000584888 CABP4P57796 275 aa24.09■■□□□ 1.45
ERBB2-221ENST00000584888 CD2APQ9Y5K6 639 aa24.09■■□□□ 1.45
ERBB2-221ENST00000584888 CHD4Q14839 1912 aa24.09■■□□□ 1.45
ERBB2-221ENST00000584888 KDM6AO15550 1401 aaPredicted RBP24.09■■□□□ 1.45
ERBB2-221ENST00000584888 C1orf141Q5JVX7 400 aa24.08■■□□□ 1.45
ERBB2-221ENST00000584888 SLC4A9Q96Q91 983 aa24.08■■□□□ 1.45
ERBB2-221ENST00000584888 RBM42Q9BTD8 480 aaKnown RBP24.08■■□□□ 1.45
ERBB2-221ENST00000584888 YBX3P16989 372 aaKnown RBP eCLIP24.06■■□□□ 1.44
ERBB2-221ENST00000584888 PPP2R1AP30153 589 aa24.04■■□□□ 1.44
ERBB2-221ENST00000584888 GRIN3BO60391 1043 aa24.03■■□□□ 1.44
ERBB2-221ENST00000584888 NFATC2IPQ8NCF5 419 aa24.03■■□□□ 1.44
ERBB2-221ENST00000584888 HMOX1P09601 288 aa24.02■■□□□ 1.44
ERBB2-221ENST00000584888 RTCBQ9Y3I0 505 aaKnown RBP24.02■■□□□ 1.44
ERBB2-221ENST00000584888 TRAPPC3LQ5T215 181 aa24.01■■□□□ 1.43
ERBB2-221ENST00000584888 RC3H1Q5TC82 1133 aaKnown RBP24.01■■□□□ 1.43
ERBB2-221ENST00000584888 PTCD1O75127 700 aaKnown RBP24■■□□□ 1.43
ERBB2-221ENST00000584888 AKAP4Q5JQC9 854 aa23.99■■□□□ 1.43
ERBB2-221ENST00000584888 CNTNAP4Q9C0A0 1308 aa23.99■■□□□ 1.43
ERBB2-221ENST00000584888 ZNF831Q5JPB2 1677 aa23.99■■□□□ 1.43
ERBB2-221ENST00000584888 ARHGEF1Q92888 912 aaKnown RBP23.98■■□□□ 1.43
ERBB2-221ENST00000584888 SCN11AQ9UI33 1791 aa23.98■■□□□ 1.43
ERBB2-221ENST00000584888 RPS6KA4O75676 772 aa23.97■■□□□ 1.43
ERBB2-221ENST00000584888 ZEB1P37275 1124 aaPredicted RBP23.97■■□□□ 1.43
ERBB2-221ENST00000584888 MMP10P09238 476 aa23.96■■□□□ 1.43
ERBB2-221ENST00000584888 ADRA2BP18089 450 aa23.96■■□□□ 1.43
ERBB2-221ENST00000584888 CFAP53Q96M91 514 aa23.96■■□□□ 1.43
ERBB2-221ENST00000584888 MTHFSDQ2M296 383 aaKnown RBP23.95■■□□□ 1.42
ERBB2-221ENST00000584888 NLGN1Q8N2Q7 840 aa23.95■■□□□ 1.42
ERBB2-221ENST00000584888 LGR6Q9HBX8 967 aa23.95■■□□□ 1.42
ERBB2-221ENST00000584888 GOLGB1Q14789 3259 aaKnown RBP23.94■■□□□ 1.42
ERBB2-221ENST00000584888 VIRMAQ69YN4 1812 aaKnown RBP23.94■■□□□ 1.42
ERBB2-221ENST00000584888 U2SURPO15042 1029 aaKnown RBP23.94■■□□□ 1.42
ERBB2-221ENST00000584888 DDX10Q13206 875 aaKnown RBP23.94■■□□□ 1.42
ERBB2-221ENST00000584888 ADAMTS7Q9UKP4 1686 aa23.93■■□□□ 1.42
ERBB2-221ENST00000584888 RFC4P35249 363 aa23.93■■□□□ 1.42
ERBB2-221ENST00000584888 SLC52A2Q9HAB3 445 aa23.93■■□□□ 1.42
ERBB2-221ENST00000584888 COL5A3P25940 1745 aaPredicted RBP23.93■■□□□ 1.42
ERBB2-221ENST00000584888 RNMTO43148 476 aaKnown RBP23.92■■□□□ 1.42
ERBB2-221ENST00000584888 CRKLP46109 303 aaKnown RBP23.92■■□□□ 1.42
ERBB2-221ENST00000584888 GYS1P13807 737 aa23.91■■□□□ 1.42
ERBB2-221ENST00000584888 WWC3Q9ULE0 1092 aa23.91■■□□□ 1.42
ERBB2-221ENST00000584888 MYH14Q7Z406 1995 aaKnown RBP23.91■■□□□ 1.42
ERBB2-221ENST00000584888 RSPH6AQ9H0K4 717 aa23.9■■□□□ 1.42
ERBB2-221ENST00000584888 NUDCQ9Y266 331 aa23.9■■□□□ 1.42
ERBB2-221ENST00000584888 MRC1P22897 1456 aa23.87■■□□□ 1.41
ERBB2-221ENST00000584888 SLC39A6Q13433 755 aa23.87■■□□□ 1.41
ERBB2-221ENST00000584888 INTS5Q6P9B9 1019 aaKnown RBP23.87■■□□□ 1.41
ERBB2-221ENST00000584888 DNAJC10Q8IXB1 793 aa23.87■■□□□ 1.41
ERBB2-221ENST00000584888 C1QTNF8P60827 252 aa23.86■■□□□ 1.41
ERBB2-221ENST00000584888 RALBP1Q15311 655 aa23.86■■□□□ 1.41
ERBB2-221ENST00000584888 PHACTR3Q96KR7 559 aa23.86■■□□□ 1.41
ERBB2-221ENST00000584888 FCHSD2O94868 740 aa23.85■■□□□ 1.41
ERBB2-221ENST00000584888 PRKAR2BP31323 418 aa23.85■■□□□ 1.41
ERBB2-221ENST00000584888 SRP68Q9UHB9 627 aaKnown RBP23.85■■□□□ 1.41
ERBB2-221ENST00000584888 PARP3Q9Y6F1 533 aa23.85■■□□□ 1.41
ERBB2-221ENST00000584888 CICQ96RK0 1608 aaPredicted RBP23.84■■□□□ 1.41
ERBB2-221ENST00000584888 TJP1Q07157 1748 aa23.84■■□□□ 1.41
ERBB2-221ENST00000584888 U2AF1L5P0DN76 240 aaPredicted RBP23.84■■□□□ 1.41
ERBB2-221ENST00000584888 TGFB2P61812 414 aa23.84■■□□□ 1.41
ERBB2-221ENST00000584888 U2AF1Q01081 240 aaKnown RBP eCLIP23.84■■□□□ 1.41
ERBB2-221ENST00000584888 GAS2L2Q8NHY3 880 aa23.84■■□□□ 1.41
ERBB2-221ENST00000584888 CCDC87Q9NVE4 849 aa23.84■■□□□ 1.41
ERBB2-221ENST00000584888 GIGYF1O75420 1035 aaPredicted RBP23.83■■□□□ 1.41
ERBB2-221ENST00000584888 USP42Q9H9J4 1324 aaKnown RBP23.83■■□□□ 1.4
ERBB2-221ENST00000584888 PXDNLA1KZ92 1463 aa23.82■■□□□ 1.4
ERBB2-221ENST00000584888 A0A0G2JLW4 131 aa23.82■■□□□ 1.4
ERBB2-221ENST00000584888 CYP19A1P11511 503 aaPredicted RBP23.82■■□□□ 1.4
ERBB2-221ENST00000584888 FKBP8Q14318 412 aa23.82■■□□□ 1.4
ERBB2-221ENST00000584888 C10orf71Q711Q0 1435 aa23.82■■□□□ 1.4
ERBB2-221ENST00000584888 C4AP0C0L4 1744 aa23.81■■□□□ 1.4
ERBB2-221ENST00000584888 IL17REQ8NFR9 667 aa23.81■■□□□ 1.4
ERBB2-221ENST00000584888 KIF13BQ9NQT8 1826 aa23.8■■□□□ 1.4
ERBB2-221ENST00000584888 GNAT3A8MTJ3 354 aa23.8■■□□□ 1.4
ERBB2-221ENST00000584888 ATP10DQ9P241 1426 aa23.8■■□□□ 1.4
ERBB2-221ENST00000584888 SIPA1L3O60292 1781 aaPredicted RBP23.79■■□□□ 1.4
ERBB2-221ENST00000584888 DPEP1P16444 411 aa23.79■■□□□ 1.4
ERBB2-221ENST00000584888 VSIG10Q8N0Z9 540 aa23.79■■□□□ 1.4
ERBB2-221ENST00000584888 SOS1Q07889 1333 aaPredicted RBP23.79■■□□□ 1.4
ERBB2-221ENST00000584888 KCPQ6ZWJ8 1503 aa23.79■■□□□ 1.4
ERBB2-221ENST00000584888 CEMIPQ8WUJ3 1361 aa23.78■■□□□ 1.4
ERBB2-221ENST00000584888 ZPR1O75312 459 aa23.77■■□□□ 1.4
ERBB2-221ENST00000584888 DDR1Q08345 913 aa23.77■■□□□ 1.4
ERBB2-221ENST00000584888 BCS1LQ9Y276 419 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms