RNA–Protein interactions for RNA: ENST00000584876.1

TRAPPC8-213, Transcript of trafficking protein particle complex 8, humanhuman

TSL 5

Gene TRAPPC8, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-213ENST00000584876 PANK3Q9H999 370 aa31.59■■■□□ 2.65
TRAPPC8-213ENST00000584876 ATG3Q9NT62 314 aa31.59■■■□□ 2.65
TRAPPC8-213ENST00000584876 GNPATO15228 680 aa31.58■■■□□ 2.65
TRAPPC8-213ENST00000584876 ZNF831Q5JPB2 1677 aa31.55■■■□□ 2.64
TRAPPC8-213ENST00000584876 KDRP35968 1356 aa31.55■■■□□ 2.64
TRAPPC8-213ENST00000584876 COL5A3P25940 1745 aaPredicted RBP31.52■■■□□ 2.64
TRAPPC8-213ENST00000584876 ERVV-2B6SEH9 535 aa31.52■■■□□ 2.64
TRAPPC8-213ENST00000584876 HSP90AB1P08238 724 aaKnown RBP31.52■■■□□ 2.64
TRAPPC8-213ENST00000584876 ATP10DQ9P241 1426 aa31.51■■■□□ 2.64
TRAPPC8-213ENST00000584876 PLEKHO1Q53GL0 409 aaPredicted RBP31.51■■■□□ 2.63
TRAPPC8-213ENST00000584876 DCAF5Q96JK2 942 aa31.51■■■□□ 2.63
TRAPPC8-213ENST00000584876 ZNF530Q6P9A1 599 aaPredicted RBP31.49■■■□□ 2.63
TRAPPC8-213ENST00000584876 RBM42Q9BTD8 480 aaKnown RBP31.49■■■□□ 2.63
TRAPPC8-213ENST00000584876 WWC3Q9ULE0 1092 aa31.49■■■□□ 2.63
TRAPPC8-213ENST00000584876 KDM6AO15550 1401 aaPredicted RBP31.49■■■□□ 2.63
TRAPPC8-213ENST00000584876 MORC1Q86VD1 984 aa31.48■■■□□ 2.63
TRAPPC8-213ENST00000584876 AMOTQ4VCS5 1084 aa31.47■■■□□ 2.63
TRAPPC8-213ENST00000584876 SLC4A9Q96Q91 983 aa31.47■■■□□ 2.63
TRAPPC8-213ENST00000584876 KIF13BQ9NQT8 1826 aa31.47■■■□□ 2.63
TRAPPC8-213ENST00000584876 RTCBQ9Y3I0 505 aaKnown RBP31.46■■■□□ 2.63
TRAPPC8-213ENST00000584876 MMP10P09238 476 aa31.45■■■□□ 2.63
TRAPPC8-213ENST00000584876 AEBP1Q8IUX7 1158 aa31.45■■■□□ 2.63
TRAPPC8-213ENST00000584876 ADCY9O60503 1353 aa31.44■■■□□ 2.62
TRAPPC8-213ENST00000584876 CABP4P57796 275 aa31.44■■■□□ 2.62
TRAPPC8-213ENST00000584876 TRAPPC3LQ5T215 181 aa31.44■■■□□ 2.62
TRAPPC8-213ENST00000584876 MYH14Q7Z406 1995 aaKnown RBP31.43■■■□□ 2.62
TRAPPC8-213ENST00000584876 CICQ96RK0 1608 aaPredicted RBP31.43■■■□□ 2.62
TRAPPC8-213ENST00000584876 C4AP0C0L4 1744 aa31.42■■■□□ 2.62
TRAPPC8-213ENST00000584876 KIAA1551Q9HCM1 1747 aa31.42■■■□□ 2.62
TRAPPC8-213ENST00000584876 C1orf141Q5JVX7 400 aa31.42■■■□□ 2.62
TRAPPC8-213ENST00000584876 CCER1Q8TC90 406 aaPredicted RBP31.42■■■□□ 2.62
TRAPPC8-213ENST00000584876 N4BP2Q86UW6 1770 aaPredicted RBP31.42■■■□□ 2.62
TRAPPC8-213ENST00000584876 CNTNAP4Q9C0A0 1308 aa31.42■■■□□ 2.62
TRAPPC8-213ENST00000584876 RC3H1Q5TC82 1133 aaKnown RBP31.41■■■□□ 2.62
TRAPPC8-213ENST00000584876 KNSTRNQ9Y448 316 aa31.41■■■□□ 2.62
TRAPPC8-213ENST00000584876 ADRA2BP18089 450 aa31.4■■■□□ 2.62
TRAPPC8-213ENST00000584876 MTHFSP49914 203 aa31.4■■■□□ 2.62
TRAPPC8-213ENST00000584876 SCN11AQ9UI33 1791 aa31.4■■■□□ 2.62
TRAPPC8-213ENST00000584876 SULT6B1Q6IMI4 303 aa31.39■■■□□ 2.62
TRAPPC8-213ENST00000584876 GPBP1L1Q9HC44 474 aaPredicted RBP31.39■■■□□ 2.62
TRAPPC8-213ENST00000584876 PXDNLA1KZ92 1463 aa31.39■■■□□ 2.62
TRAPPC8-213ENST00000584876 NLGN1Q8N2Q7 840 aa31.38■■■□□ 2.61
TRAPPC8-213ENST00000584876 ARHGEF1Q92888 912 aaKnown RBP31.38■■■□□ 2.61
TRAPPC8-213ENST00000584876 RPS6KA4O75676 772 aa31.36■■■□□ 2.61
TRAPPC8-213ENST00000584876 ZNF526Q8TF50 670 aaPredicted RBP31.36■■■□□ 2.61
TRAPPC8-213ENST00000584876 TJP1Q07157 1748 aa31.35■■■□□ 2.61
TRAPPC8-213ENST00000584876 C10orf71Q711Q0 1435 aa31.35■■■□□ 2.61
TRAPPC8-213ENST00000584876 RFC4P35249 363 aa31.35■■■□□ 2.61
TRAPPC8-213ENST00000584876 PTCD1O75127 700 aaKnown RBP31.34■■■□□ 2.61
TRAPPC8-213ENST00000584876 IL13P35225 146 aa31.34■■■□□ 2.61
TRAPPC8-213ENST00000584876 VIRMAQ69YN4 1812 aaKnown RBP31.33■■■□□ 2.61
TRAPPC8-213ENST00000584876 GYS1P13807 737 aa31.33■■■□□ 2.61
TRAPPC8-213ENST00000584876 NFATC2IPQ8NCF5 419 aa31.33■■■□□ 2.61
TRAPPC8-213ENST00000584876 TGFB2P61812 414 aa31.32■■■□□ 2.6
TRAPPC8-213ENST00000584876 CCDC87Q9NVE4 849 aa31.31■■■□□ 2.6
TRAPPC8-213ENST00000584876 BRCA1P38398 1863 aaKnown RBP31.31■■■□□ 2.6
TRAPPC8-213ENST00000584876 AMER1Q5JTC6 1135 aaPredicted RBP31.3■■■□□ 2.6
TRAPPC8-213ENST00000584876 CRKLP46109 303 aaKnown RBP31.29■■■□□ 2.6
TRAPPC8-213ENST00000584876 PARP3Q9Y6F1 533 aa31.29■■■□□ 2.6
TRAPPC8-213ENST00000584876 A0A0G2JLW4 131 aa31.28■■■□□ 2.6
TRAPPC8-213ENST00000584876 BCS1LQ9Y276 419 aa31.27■■■□□ 2.6
TRAPPC8-213ENST00000584876 CEP350Q5VT06 3117 aa31.27■■■□□ 2.6
TRAPPC8-213ENST00000584876 KIF7Q2M1P5 1343 aa31.26■■■□□ 2.6
TRAPPC8-213ENST00000584876 AKAP4Q5JQC9 854 aa31.26■■■□□ 2.59
TRAPPC8-213ENST00000584876 DPEP1P16444 411 aa31.23■■■□□ 2.59
TRAPPC8-213ENST00000584876 SRP68Q9UHB9 627 aaKnown RBP31.23■■■□□ 2.59
TRAPPC8-213ENST00000584876 USP42Q9H9J4 1324 aaKnown RBP31.23■■■□□ 2.59
TRAPPC8-213ENST00000584876 MRC1P22897 1456 aa31.22■■■□□ 2.59
TRAPPC8-213ENST00000584876 ARFGEF1Q9Y6D6 1849 aa31.22■■■□□ 2.59
TRAPPC8-213ENST00000584876 ADAMTS7Q9UKP4 1686 aa31.22■■■□□ 2.59
TRAPPC8-213ENST00000584876 SLC52A2Q9HAB3 445 aa31.21■■■□□ 2.59
TRAPPC8-213ENST00000584876 HMOX1P09601 288 aa31.2■■■□□ 2.59
TRAPPC8-213ENST00000584876 FCHSD2O94868 740 aa31.19■■■□□ 2.58
TRAPPC8-213ENST00000584876 FKBP8Q14318 412 aa31.19■■■□□ 2.58
TRAPPC8-213ENST00000584876 LGR6Q9HBX8 967 aa31.19■■■□□ 2.58
TRAPPC8-213ENST00000584876 INTS5Q6P9B9 1019 aaKnown RBP31.18■■■□□ 2.58
TRAPPC8-213ENST00000584876 ARHGAP27Q6ZUM4 889 aa31.18■■■□□ 2.58
TRAPPC8-213ENST00000584876 DNAJC10Q8IXB1 793 aa31.17■■■□□ 2.58
TRAPPC8-213ENST00000584876 KIF3CO14782 793 aa31.16■■■□□ 2.58
TRAPPC8-213ENST00000584876 RNMTO43148 476 aaKnown RBP31.16■■■□□ 2.58
TRAPPC8-213ENST00000584876 HSPA6P17066 643 aa31.16■■■□□ 2.58
TRAPPC8-213ENST00000584876 DDR1Q08345 913 aa31.16■■■□□ 2.58
TRAPPC8-213ENST00000584876 KCPQ6ZWJ8 1503 aa31.14■■■□□ 2.58
TRAPPC8-213ENST00000584876 KCNA3P22001 575 aa31.14■■■□□ 2.58
TRAPPC8-213ENST00000584876 SLC39A6Q13433 755 aa31.14■■■□□ 2.58
TRAPPC8-213ENST00000584876 CC2D1BQ5T0F9 858 aaKnown RBP31.14■■■□□ 2.58
TRAPPC8-213ENST00000584876 DIAPH1O60610 1272 aaKnown RBP31.13■■■□□ 2.57
TRAPPC8-213ENST00000584876 PER1O15534 1290 aaPredicted RBP31.12■■■□□ 2.57
TRAPPC8-213ENST00000584876 MTHFSDQ2M296 383 aaKnown RBP31.12■■■□□ 2.57
TRAPPC8-213ENST00000584876 PIM2Q9P1W9 311 aa31.12■■■□□ 2.57
TRAPPC8-213ENST00000584876 SOS1Q07889 1333 aaPredicted RBP31.12■■■□□ 2.57
TRAPPC8-213ENST00000584876 ZPR1O75312 459 aa31.11■■■□□ 2.57
TRAPPC8-213ENST00000584876 UBR2Q8IWV8 1755 aa31.11■■■□□ 2.57
TRAPPC8-213ENST00000584876 AFDNP55196 1824 aaKnown RBP31.1■■■□□ 2.57
TRAPPC8-213ENST00000584876 CYP19A1P11511 503 aaPredicted RBP31.1■■■□□ 2.57
TRAPPC8-213ENST00000584876 USPL1Q5W0Q7 1092 aa31.1■■■□□ 2.57
TRAPPC8-213ENST00000584876 POLRMTO00411 1230 aaKnown RBP31.09■■■□□ 2.57
TRAPPC8-213ENST00000584876 TM4SF1P30408 202 aa31.08■■■□□ 2.57
TRAPPC8-213ENST00000584876 COL15A1P39059 1388 aa31.07■■■□□ 2.56
TRAPPC8-213ENST00000584876 DALRD3Q5D0E6 543 aaKnown RBP31.07■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms