RNA–Protein interactions for RNA: ENST00000584669.5

TOP3A-218, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-218ENST00000584669 COL24A1Q17RW2 1714 aa27.92■■■□□ 2.06
TOP3A-218ENST00000584669 U2SURPO15042 1029 aaKnown RBP27.91■■■□□ 2.06
TOP3A-218ENST00000584669 FLAD1Q8NFF5 587 aa27.91■■■□□ 2.06
TOP3A-218ENST00000584669 CFAP53Q96M91 514 aa27.91■■■□□ 2.06
TOP3A-218ENST00000584669 ASAP1Q9ULH1 1129 aa27.91■■■□□ 2.06
TOP3A-218ENST00000584669 C4BP0C0L5 1744 aa27.91■■■□□ 2.06
TOP3A-218ENST00000584669 KDM6AO15550 1401 aaPredicted RBP27.91■■■□□ 2.06
TOP3A-218ENST00000584669 LOC102724428A0A0B4J2F2 783 aa27.9■■■□□ 2.06
TOP3A-218ENST00000584669 PHF14O94880 888 aa27.9■■■□□ 2.06
TOP3A-218ENST00000584669 SIK1P57059 783 aa27.9■■■□□ 2.06
TOP3A-218ENST00000584669 NLGN2Q8NFZ4 835 aa27.89■■■□□ 2.06
TOP3A-218ENST00000584669 C1orf141Q5JVX7 400 aa27.88■■■□□ 2.05
TOP3A-218ENST00000584669 SMIM5Q71RC9 77 aa27.87■■■□□ 2.05
TOP3A-218ENST00000584669 DCAF5Q96JK2 942 aa27.87■■■□□ 2.05
TOP3A-218ENST00000584669 HSP90AB1P08238 724 aaKnown RBP27.86■■■□□ 2.05
TOP3A-218ENST00000584669 LINC00116Q8NCU8 138 aa27.86■■■□□ 2.05
TOP3A-218ENST00000584669 ATP6V1AP38606 617 aa27.85■■■□□ 2.05
TOP3A-218ENST00000584669 AMIGO3Q86WK7 504 aa27.85■■■□□ 2.05
TOP3A-218ENST00000584669 ATG3Q9NT62 314 aa27.85■■■□□ 2.05
TOP3A-218ENST00000584669 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.84■■■□□ 2.05
TOP3A-218ENST00000584669 ITPK1Q13572 414 aa27.83■■■□□ 2.05
TOP3A-218ENST00000584669 ERVV-2B6SEH9 535 aa27.82■■■□□ 2.04
TOP3A-218ENST00000584669 GNPATO15228 680 aa27.82■■■□□ 2.04
TOP3A-218ENST00000584669 MTHFSDQ2M296 383 aaKnown RBP27.82■■■□□ 2.04
TOP3A-218ENST00000584669 CHD4Q14839 1912 aa27.82■■■□□ 2.04
TOP3A-218ENST00000584669 ADAMTS7Q9UKP4 1686 aa27.81■■■□□ 2.04
TOP3A-218ENST00000584669 UBR3Q6ZT12 1888 aa27.81■■■□□ 2.04
TOP3A-218ENST00000584669 AKAP4Q5JQC9 854 aa27.8■■■□□ 2.04
TOP3A-218ENST00000584669 ZNF784Q8NCA9 323 aaPredicted RBP27.8■■■□□ 2.04
TOP3A-218ENST00000584669 RBM42Q9BTD8 480 aaKnown RBP27.8■■■□□ 2.04
TOP3A-218ENST00000584669 NUDCQ9Y266 331 aa27.8■■■□□ 2.04
TOP3A-218ENST00000584669 SSFA2P28290 1259 aa27.79■■■□□ 2.04
TOP3A-218ENST00000584669 CABP4P57796 275 aa27.79■■■□□ 2.04
TOP3A-218ENST00000584669 RSPH6AQ9H0K4 717 aa27.78■■■□□ 2.04
TOP3A-218ENST00000584669 U2AF1L5P0DN76 240 aaPredicted RBP27.77■■■□□ 2.04
TOP3A-218ENST00000584669 U2AF1Q01081 240 aaKnown RBP eCLIP27.77■■■□□ 2.04
TOP3A-218ENST00000584669 PRKAR2BP31323 418 aa27.76■■■□□ 2.03
TOP3A-218ENST00000584669 RALBP1Q15311 655 aa27.76■■■□□ 2.03
TOP3A-218ENST00000584669 LGR6Q9HBX8 967 aa27.76■■■□□ 2.03
TOP3A-218ENST00000584669 ZNF831Q5JPB2 1677 aa27.75■■■□□ 2.03
TOP3A-218ENST00000584669 NFATC2IPQ8NCF5 419 aa27.74■■■□□ 2.03
TOP3A-218ENST00000584669 CD2APQ9Y5K6 639 aa27.74■■■□□ 2.03
TOP3A-218ENST00000584669 DLG5Q8TDM6 1919 aa27.73■■■□□ 2.03
TOP3A-218ENST00000584669 MRC1P22897 1456 aa27.73■■■□□ 2.03
TOP3A-218ENST00000584669 RNMTO43148 476 aaKnown RBP27.73■■■□□ 2.03
TOP3A-218ENST00000584669 YBX3P16989 372 aaKnown RBP eCLIP27.73■■■□□ 2.03
TOP3A-218ENST00000584669 PHACTR3Q96KR7 559 aa27.73■■■□□ 2.03
TOP3A-218ENST00000584669 SIPA1L3O60292 1781 aaPredicted RBP27.73■■■□□ 2.03
TOP3A-218ENST00000584669 COL5A3P25940 1745 aaPredicted RBP27.72■■■□□ 2.03
TOP3A-218ENST00000584669 SLC4A9Q96Q91 983 aa27.72■■■□□ 2.03
TOP3A-218ENST00000584669 PTCD1O75127 700 aaKnown RBP27.7■■■□□ 2.02
TOP3A-218ENST00000584669 GAS2L2Q8NHY3 880 aa27.7■■■□□ 2.02
TOP3A-218ENST00000584669 RTCBQ9Y3I0 505 aaKnown RBP27.7■■■□□ 2.02
TOP3A-218ENST00000584669 GRIN3BO60391 1043 aa27.69■■■□□ 2.02
TOP3A-218ENST00000584669 SLC52A2Q9HAB3 445 aa27.69■■■□□ 2.02
TOP3A-218ENST00000584669 TJP1Q07157 1748 aa27.68■■■□□ 2.02
TOP3A-218ENST00000584669 FCHSD2O94868 740 aa27.68■■■□□ 2.02
TOP3A-218ENST00000584669 MYBBP1AQ9BQG0 1328 aaKnown RBP27.67■■■□□ 2.02
TOP3A-218ENST00000584669 TRAPPC3LQ5T215 181 aa27.67■■■□□ 2.02
TOP3A-218ENST00000584669 WWC3Q9ULE0 1092 aa27.67■■■□□ 2.02
TOP3A-218ENST00000584669 MYH14Q7Z406 1995 aaKnown RBP27.67■■■□□ 2.02
TOP3A-218ENST00000584669 GNAT3A8MTJ3 354 aa27.66■■■□□ 2.02
TOP3A-218ENST00000584669 UBR2Q8IWV8 1755 aa27.65■■■□□ 2.02
TOP3A-218ENST00000584669 ZNF316A6NFI3 1004 aaPredicted RBP27.65■■■□□ 2.02
TOP3A-218ENST00000584669 MMP10P09238 476 aa27.65■■■□□ 2.02
TOP3A-218ENST00000584669 CNTNAP4Q9C0A0 1308 aa27.65■■■□□ 2.02
TOP3A-218ENST00000584669 CICQ96RK0 1608 aaPredicted RBP27.64■■■□□ 2.02
TOP3A-218ENST00000584669 IL17REQ8NFR9 667 aa27.64■■■□□ 2.02
TOP3A-218ENST00000584669 RC3H1Q5TC82 1133 aaKnown RBP27.63■■■□□ 2.01
TOP3A-218ENST00000584669 PRKRIP1Q9H875 184 aaPredicted RBP27.62■■■□□ 2.01
TOP3A-218ENST00000584669 RPS6KA4O75676 772 aa27.61■■■□□ 2.01
TOP3A-218ENST00000584669 ADRA2BP18089 450 aa27.61■■■□□ 2.01
TOP3A-218ENST00000584669 RFC4P35249 363 aa27.61■■■□□ 2.01
TOP3A-218ENST00000584669 SLC39A6Q13433 755 aa27.61■■■□□ 2.01
TOP3A-218ENST00000584669 ARHGEF1Q92888 912 aaKnown RBP27.61■■■□□ 2.01
TOP3A-218ENST00000584669 UTRNP46939 3433 aa27.61■■■□□ 2.01
TOP3A-218ENST00000584669 KCPQ6ZWJ8 1503 aa27.6■■■□□ 2.01
TOP3A-218ENST00000584669 CRKLP46109 303 aaKnown RBP27.59■■■□□ 2.01
TOP3A-218ENST00000584669 NLGN1Q8N2Q7 840 aa27.58■■■□□ 2.01
TOP3A-218ENST00000584669 PLEKHF1Q96S99 279 aa27.58■■■□□ 2.01
TOP3A-218ENST00000584669 CEMIPQ8WUJ3 1361 aa27.57■■■□□ 2
TOP3A-218ENST00000584669 TEFQ10587 303 aa27.56■■■□□ 2
TOP3A-218ENST00000584669 C4AP0C0L4 1744 aa27.55■■■□□ 2
TOP3A-218ENST00000584669 GYS1P13807 737 aa27.54■■■□□ 2
TOP3A-218ENST00000584669 NEFMP07197 916 aa27.53■■■□□ 2
TOP3A-218ENST00000584669 DCTN1Q14203 1278 aa27.53■■■□□ 2
TOP3A-218ENST00000584669 MCM10Q7L590 875 aa27.53■■■□□ 2
TOP3A-218ENST00000584669 DNAJC10Q8IXB1 793 aa27.53■■■□□ 2
TOP3A-218ENST00000584669 SRP68Q9UHB9 627 aaKnown RBP27.52■■■□□ 2
TOP3A-218ENST00000584669 PARP3Q9Y6F1 533 aa27.52■■■□□ 2
TOP3A-218ENST00000584669 GIGYF1O75420 1035 aaPredicted RBP27.51■■□□□ 1.99
TOP3A-218ENST00000584669 RTF1Q92541 710 aaKnown RBP27.51■■□□□ 1.99
TOP3A-218ENST00000584669 CCDC87Q9NVE4 849 aa27.51■■□□□ 1.99
TOP3A-218ENST00000584669 GOLGB1Q14789 3259 aaKnown RBP27.5■■□□□ 1.99
TOP3A-218ENST00000584669 C1QTNF8P60827 252 aa27.49■■□□□ 1.99
TOP3A-218ENST00000584669 PNNQ9H307 717 aaKnown RBP27.49■■□□□ 1.99
TOP3A-218ENST00000584669 PXDNLA1KZ92 1463 aa27.49■■□□□ 1.99
TOP3A-218ENST00000584669 C10orf71Q711Q0 1435 aa27.49■■□□□ 1.99
TOP3A-218ENST00000584669 ATP10DQ9P241 1426 aa27.49■■□□□ 1.99
TOP3A-218ENST00000584669 MAPK8IP3Q9UPT6 1336 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms