RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 MAP3K2Q9Y2U5 619 aa13.78□□□□□ -0.2
TOP3A-217ENST00000584582 ARHGEF40Q8TER5 1519 aa13.78□□□□□ -0.2
TOP3A-217ENST00000584582 DDX11L8A8MPP1 907 aa13.77□□□□□ -0.2
TOP3A-217ENST00000584582 GSPT1P15170 499 aaKnown RBP13.77□□□□□ -0.2
TOP3A-217ENST00000584582 FOSBP53539 338 aa13.77□□□□□ -0.2
TOP3A-217ENST00000584582 DNAAF4Q8WXU2 420 aa13.77□□□□□ -0.2
TOP3A-217ENST00000584582 TNPO1Q92973 898 aaKnown RBP13.77□□□□□ -0.2
TOP3A-217ENST00000584582 SPG7Q9UQ90 795 aa13.77□□□□□ -0.2
TOP3A-217ENST00000584582 PTPRCP08575 1304 aa13.77□□□□□ -0.2
TOP3A-217ENST00000584582 PRAMEF22A3QJZ6 481 aa13.77□□□□□ -0.21
TOP3A-217ENST00000584582 ZNF853P0CG23 659 aa13.77□□□□□ -0.21
TOP3A-217ENST00000584582 TATP17735 454 aaPredicted RBP13.77□□□□□ -0.21
TOP3A-217ENST00000584582 KCNH5Q8NCM2 988 aa13.77□□□□□ -0.21
TOP3A-217ENST00000584582 NAP1L5Q96NT1 182 aaPredicted RBP13.77□□□□□ -0.21
TOP3A-217ENST00000584582 PRPF40AO75400 957 aaKnown RBP13.77□□□□□ -0.21
TOP3A-217ENST00000584582 PDE1AP54750 535 aa13.77□□□□□ -0.21
TOP3A-217ENST00000584582 CD2BP2O95400 341 aaKnown RBP13.76□□□□□ -0.21
TOP3A-217ENST00000584582 DDX58O95786 925 aaKnown RBP13.76□□□□□ -0.21
TOP3A-217ENST00000584582 GORABQ5T7V8 394 aa13.76□□□□□ -0.21
TOP3A-217ENST00000584582 SETBP1Q9Y6X0 1596 aa13.76□□□□□ -0.21
TOP3A-217ENST00000584582 PTMAP06454 111 aaKnown RBP13.76□□□□□ -0.21
TOP3A-217ENST00000584582 NBPF7P0C2Y1 421 aaPredicted RBP13.76□□□□□ -0.21
TOP3A-217ENST00000584582 CAVIN1Q6NZI2 390 aaKnown RBP13.76□□□□□ -0.21
TOP3A-217ENST00000584582 MPNDQ8N594 471 aa13.76□□□□□ -0.21
TOP3A-217ENST00000584582 CHAMP1Q96JM3 812 aa13.76□□□□□ -0.21
TOP3A-217ENST00000584582 AACSQ86V21 672 aa13.76□□□□□ -0.21
TOP3A-217ENST00000584582 NFATC2IPQ8NCF5 419 aa13.76□□□□□ -0.21
TOP3A-217ENST00000584582 FAM135BQ49AJ0 1406 aa13.75□□□□□ -0.21
TOP3A-217ENST00000584582 DNAJC2Q99543 621 aaKnown RBP13.75□□□□□ -0.21
TOP3A-217ENST00000584582 TAF7LQ5H9L4 462 aa13.75□□□□□ -0.21
TOP3A-217ENST00000584582 RNF214Q8ND24 703 aa13.75□□□□□ -0.21
TOP3A-217ENST00000584582 KLHDC4Q8TBB5 520 aa13.75□□□□□ -0.21
TOP3A-217ENST00000584582 GPATCH3Q96I76 525 aa13.75□□□□□ -0.21
TOP3A-217ENST00000584582 CPS1P31327 1500 aa13.75□□□□□ -0.21
TOP3A-217ENST00000584582 ABCC4O15439 1325 aa13.75□□□□□ -0.21
TOP3A-217ENST00000584582 CABP4P57796 275 aa13.75□□□□□ -0.21
TOP3A-217ENST00000584582 RABEP1Q15276 862 aa13.75□□□□□ -0.21
TOP3A-217ENST00000584582 USP6P35125 1406 aa13.74□□□□□ -0.21
TOP3A-217ENST00000584582 BOLA2Q9H3K6 86 aa13.74□□□□□ -0.21
TOP3A-217ENST00000584582 PNPLA6Q8IY17 1366 aa13.74□□□□□ -0.21
TOP3A-217ENST00000584582 MYD88Q99836 296 aa13.74□□□□□ -0.21
TOP3A-217ENST00000584582 MYOM1P52179 1685 aa13.74□□□□□ -0.21
TOP3A-217ENST00000584582 CLTCQ00610 1675 aaKnown RBP13.74□□□□□ -0.21
TOP3A-217ENST00000584582 ZGPATQ8N5A5 531 aaKnown RBP13.74□□□□□ -0.21
TOP3A-217ENST00000584582 LRRC7Q96NW7 1537 aa13.73□□□□□ -0.21
TOP3A-217ENST00000584582 SBNO1A3KN83 1393 aa13.73□□□□□ -0.21
TOP3A-217ENST00000584582 PANK2Q9BZ23 570 aa13.73□□□□□ -0.21
TOP3A-217ENST00000584582 GDPD2Q9HCC8 539 aa13.73□□□□□ -0.21
TOP3A-217ENST00000584582 PPFIA3O75145 1194 aa13.73□□□□□ -0.21
TOP3A-217ENST00000584582 IP6K1Q92551 441 aa13.73□□□□□ -0.21
TOP3A-217ENST00000584582 FSD1Q9BTV5 496 aa13.73□□□□□ -0.21
TOP3A-217ENST00000584582 CD163L1Q9NR16 1453 aa13.73□□□□□ -0.21
TOP3A-217ENST00000584582 ATP7BP35670 1465 aa13.72□□□□□ -0.21
TOP3A-217ENST00000584582 VPS37CA5D8V6 355 aaPredicted RBP13.72□□□□□ -0.21
TOP3A-217ENST00000584582 ANO8Q9HCE9 1232 aaPredicted RBP13.72□□□□□ -0.21
TOP3A-217ENST00000584582 RIMBP3CA6NJZ7 1639 aa13.72□□□□□ -0.21
TOP3A-217ENST00000584582 RIMBP3BA6NNM3 1639 aa13.72□□□□□ -0.21
TOP3A-217ENST00000584582 RIMBP3Q9UFD9 1639 aa13.72□□□□□ -0.21
TOP3A-217ENST00000584582 HSP90B1P14625 803 aaKnown RBP13.72□□□□□ -0.21
TOP3A-217ENST00000584582 TCEANC2Q96MN5 208 aa13.72□□□□□ -0.21
TOP3A-217ENST00000584582 DBF4Q9UBU7 674 aaPredicted RBP13.71□□□□□ -0.21
TOP3A-217ENST00000584582 MAP3K5Q99683 1374 aa13.71□□□□□ -0.21
TOP3A-217ENST00000584582 KDM4AO75164 1064 aa13.71□□□□□ -0.22
TOP3A-217ENST00000584582 CPA1P15085 419 aa13.71□□□□□ -0.22
TOP3A-217ENST00000584582 STK3Q13188 491 aa13.71□□□□□ -0.22
TOP3A-217ENST00000584582 PROSER3Q2NL68 480 aa13.71□□□□□ -0.22
TOP3A-217ENST00000584582 CNTROBQ8N137 903 aa13.71□□□□□ -0.22
TOP3A-217ENST00000584582 CHMP4AQ9BY43 222 aa13.71□□□□□ -0.22
TOP3A-217ENST00000584582 PPLO60437 1756 aa13.71□□□□□ -0.22
TOP3A-217ENST00000584582 PIK3R4Q99570 1358 aa13.7□□□□□ -0.22
TOP3A-217ENST00000584582 RHPN1Q8TCX5 695 aa13.7□□□□□ -0.22
TOP3A-217ENST00000584582 ZBTB3Q9H5J0 574 aa13.7□□□□□ -0.22
TOP3A-217ENST00000584582 AATKQ6ZMQ8 1374 aa13.7□□□□□ -0.22
TOP3A-217ENST00000584582 PLEKHG1Q9ULL1 1385 aa13.7□□□□□ -0.22
TOP3A-217ENST00000584582 SIGLEC1Q9BZZ2 1709 aa13.7□□□□□ -0.22
TOP3A-217ENST00000584582 COPS6Q7L5N1 327 aa13.7□□□□□ -0.22
TOP3A-217ENST00000584582 USP44Q9H0E7 712 aa13.7□□□□□ -0.22
TOP3A-217ENST00000584582 NDUFB9Q9Y6M9 179 aa13.7□□□□□ -0.22
TOP3A-217ENST00000584582 RTL1A6NKG5 1358 aa13.7□□□□□ -0.22
TOP3A-217ENST00000584582 UBE3BQ7Z3V4 1068 aa13.69□□□□□ -0.22
TOP3A-217ENST00000584582 SIRT1Q96EB6 747 aa13.69□□□□□ -0.22
TOP3A-217ENST00000584582 IQSEC2Q5JU85 1478 aa13.69□□□□□ -0.22
TOP3A-217ENST00000584582 ATP8B2P98198 1209 aa13.69□□□□□ -0.22
TOP3A-217ENST00000584582 XAGE3Q8WTP9 111 aa13.69□□□□□ -0.22
TOP3A-217ENST00000584582 GOLGA6L4A6NEF3 574 aa13.69□□□□□ -0.22
TOP3A-217ENST00000584582 CPSF1Q10570 1443 aaKnown RBP13.69□□□□□ -0.22
TOP3A-217ENST00000584582 KIF1BPQ96EK5 621 aa13.68□□□□□ -0.22
TOP3A-217ENST00000584582 UNC5CLQ8IV45 518 aa13.68□□□□□ -0.22
TOP3A-217ENST00000584582 ZC3H13Q5T200 1668 aaKnown RBP13.68□□□□□ -0.22
TOP3A-217ENST00000584582 MYO3AQ8NEV4 1616 aa13.68□□□□□ -0.22
TOP3A-217ENST00000584582 NLRP1Q9C000 1473 aa13.68□□□□□ -0.22
TOP3A-217ENST00000584582 PKP1Q13835 747 aa13.68□□□□□ -0.22
TOP3A-217ENST00000584582 AXIN2Q9Y2T1 843 aa13.68□□□□□ -0.22
TOP3A-217ENST00000584582 KIAA1210Q9ULL0 1709 aa13.68□□□□□ -0.22
TOP3A-217ENST00000584582 MYO5BQ9ULV0 1848 aa13.68□□□□□ -0.22
TOP3A-217ENST00000584582 NUCB2P80303 420 aa13.67□□□□□ -0.22
TOP3A-217ENST00000584582 AMOTQ4VCS5 1084 aa13.67□□□□□ -0.22
TOP3A-217ENST00000584582 HSP90AB4PQ58FF6 505 aa13.67□□□□□ -0.22
TOP3A-217ENST00000584582 PRPF40BQ6NWY9 871 aaKnown RBP13.67□□□□□ -0.22
TOP3A-217ENST00000584582 NPHP1O15259 732 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms