RNA–Protein interactions for RNA: ENST00000584374.1

ITGB4-211, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 950 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-211ENST00000584374 C4BP0C0L5 1744 aa22.71■■□□□ 1.23
ITGB4-211ENST00000584374 SCN11AQ9UI33 1791 aa22.71■■□□□ 1.23
ITGB4-211ENST00000584374 ATF5Q9Y2D1 282 aaPredicted RBP22.7■■□□□ 1.22
ITGB4-211ENST00000584374 ITPK1Q13572 414 aa22.69■■□□□ 1.22
ITGB4-211ENST00000584374 SLC4A9Q96Q91 983 aa22.69■■□□□ 1.22
ITGB4-211ENST00000584374 TFCP2L1Q9NZI6 479 aa22.69■■□□□ 1.22
ITGB4-211ENST00000584374 COL24A1Q17RW2 1714 aa22.68■■□□□ 1.22
ITGB4-211ENST00000584374 AMIGO3Q86WK7 504 aa22.68■■□□□ 1.22
ITGB4-211ENST00000584374 MIER1Q8N108 512 aa22.68■■□□□ 1.22
ITGB4-211ENST00000584374 LINC00116Q8NCU8 138 aa22.68■■□□□ 1.22
ITGB4-211ENST00000584374 RSPH6AQ9H0K4 717 aa22.68■■□□□ 1.22
ITGB4-211ENST00000584374 CABP4P57796 275 aa22.67■■□□□ 1.22
ITGB4-211ENST00000584374 LGR6Q9HBX8 967 aa22.67■■□□□ 1.22
ITGB4-211ENST00000584374 ZNF831Q5JPB2 1677 aa22.67■■□□□ 1.22
ITGB4-211ENST00000584374 CCER2I3L3R5 266 aa22.66■■□□□ 1.22
ITGB4-211ENST00000584374 COL23A1Q86Y22 540 aaPredicted RBP22.66■■□□□ 1.22
ITGB4-211ENST00000584374 NFATC2IPQ8NCF5 419 aa22.66■■□□□ 1.22
ITGB4-211ENST00000584374 MRS2Q9HD23 443 aa22.66■■□□□ 1.22
ITGB4-211ENST00000584374 RNMTO43148 476 aaKnown RBP22.65■■□□□ 1.22
ITGB4-211ENST00000584374 SLC16A10Q8TF71 515 aa22.64■■□□□ 1.21
ITGB4-211ENST00000584374 PHACTR3Q96KR7 559 aa22.64■■□□□ 1.21
ITGB4-211ENST00000584374 NUDCQ9Y266 331 aa22.64■■□□□ 1.21
ITGB4-211ENST00000584374 UBR3Q6ZT12 1888 aa22.63■■□□□ 1.21
ITGB4-211ENST00000584374 PRKAR2BP31323 418 aa22.63■■□□□ 1.21
ITGB4-211ENST00000584374 ATP6V1AP38606 617 aa22.63■■□□□ 1.21
ITGB4-211ENST00000584374 SLC52A2Q9HAB3 445 aa22.63■■□□□ 1.21
ITGB4-211ENST00000584374 VIRMAQ69YN4 1812 aaKnown RBP22.61■■□□□ 1.21
ITGB4-211ENST00000584374 CICQ96RK0 1608 aaPredicted RBP22.61■■□□□ 1.21
ITGB4-211ENST00000584374 COL5A3P25940 1745 aaPredicted RBP22.61■■□□□ 1.21
ITGB4-211ENST00000584374 SMIM5Q71RC9 77 aa22.61■■□□□ 1.21
ITGB4-211ENST00000584374 PPP1R1BQ9UD71 204 aaPredicted RBP22.61■■□□□ 1.21
ITGB4-211ENST00000584374 MAP3K5Q99683 1374 aa22.61■■□□□ 1.21
ITGB4-211ENST00000584374 U2AF1L5P0DN76 240 aaPredicted RBP22.6■■□□□ 1.21
ITGB4-211ENST00000584374 HMGB2P26583 209 aaKnown RBP22.6■■□□□ 1.21
ITGB4-211ENST00000584374 U2AF1Q01081 240 aaKnown RBP eCLIP22.6■■□□□ 1.21
ITGB4-211ENST00000584374 WDR43Q15061 677 aaKnown RBP eCLIP22.6■■□□□ 1.21
ITGB4-211ENST00000584374 GAS2L2Q8NHY3 880 aa22.6■■□□□ 1.21
ITGB4-211ENST00000584374 IL17REQ8NFR9 667 aa22.59■■□□□ 1.21
ITGB4-211ENST00000584374 AK7Q96M32 723 aa22.59■■□□□ 1.21
ITGB4-211ENST00000584374 RBM42Q9BTD8 480 aaKnown RBP22.59■■□□□ 1.21
ITGB4-211ENST00000584374 KCPQ6ZWJ8 1503 aa22.58■■□□□ 1.21
ITGB4-211ENST00000584374 TJP1Q07157 1748 aa22.58■■□□□ 1.21
ITGB4-211ENST00000584374 FCHSD2O94868 740 aa22.58■■□□□ 1.21
ITGB4-211ENST00000584374 CEMIPQ8WUJ3 1361 aa22.57■■□□□ 1.2
ITGB4-211ENST00000584374 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.56■■□□□ 1.2
ITGB4-211ENST00000584374 GNAT3A8MTJ3 354 aa22.56■■□□□ 1.2
ITGB4-211ENST00000584374 PTCD1O75127 700 aaKnown RBP22.56■■□□□ 1.2
ITGB4-211ENST00000584374 SSFA2P28290 1259 aa22.56■■□□□ 1.2
ITGB4-211ENST00000584374 FLAD1Q8NFF5 587 aa22.56■■□□□ 1.2
ITGB4-211ENST00000584374 ARXQ96QS3 562 aa22.56■■□□□ 1.2
ITGB4-211ENST00000584374 CNTNAP4Q9C0A0 1308 aa22.56■■□□□ 1.2
ITGB4-211ENST00000584374 FHDC1Q9C0D6 1143 aaPredicted RBP22.55■■□□□ 1.2
ITGB4-211ENST00000584374 SIPA1L3O60292 1781 aaPredicted RBP22.55■■□□□ 1.2
ITGB4-211ENST00000584374 GNPATO15228 680 aa22.54■■□□□ 1.2
ITGB4-211ENST00000584374 PHF14O94880 888 aa22.54■■□□□ 1.2
ITGB4-211ENST00000584374 SLC39A6Q13433 755 aa22.54■■□□□ 1.2
ITGB4-211ENST00000584374 UBR2Q8IWV8 1755 aa22.53■■□□□ 1.2
ITGB4-211ENST00000584374 MSH5O43196 834 aa22.53■■□□□ 1.2
ITGB4-211ENST00000584374 RC3H1Q5TC82 1133 aaKnown RBP22.53■■□□□ 1.2
ITGB4-211ENST00000584374 MSL1Q68DK7 614 aa22.53■■□□□ 1.2
ITGB4-211ENST00000584374 MYH14Q7Z406 1995 aaKnown RBP22.52■■□□□ 1.2
ITGB4-211ENST00000584374 PLEKHF1Q96S99 279 aa22.52■■□□□ 1.2
ITGB4-211ENST00000584374 SYT17Q9BSW7 474 aa22.52■■□□□ 1.2
ITGB4-211ENST00000584374 PNNQ9H307 717 aaKnown RBP22.51■■□□□ 1.19
ITGB4-211ENST00000584374 NEFMP07197 916 aa22.5■■□□□ 1.19
ITGB4-211ENST00000584374 POLD1P28340 1107 aa22.49■■□□□ 1.19
ITGB4-211ENST00000584374 CCDC184Q52MB2 194 aa22.49■■□□□ 1.19
ITGB4-211ENST00000584374 CRKLP46109 303 aaKnown RBP22.48■■□□□ 1.19
ITGB4-211ENST00000584374 DNAJC10Q8IXB1 793 aa22.48■■□□□ 1.19
ITGB4-211ENST00000584374 FAM9BQ8IZU0 186 aa22.48■■□□□ 1.19
ITGB4-211ENST00000584374 RPS6KA4O75676 772 aa22.47■■□□□ 1.19
ITGB4-211ENST00000584374 INTS5Q6P9B9 1019 aaKnown RBP22.47■■□□□ 1.19
ITGB4-211ENST00000584374 RTCBQ9Y3I0 505 aaKnown RBP22.47■■□□□ 1.19
ITGB4-211ENST00000584374 C4AP0C0L4 1744 aa22.46■■□□□ 1.19
ITGB4-211ENST00000584374 TEFQ10587 303 aa22.46■■□□□ 1.19
ITGB4-211ENST00000584374 CYP19A1P11511 503 aaPredicted RBP22.45■■□□□ 1.18
ITGB4-211ENST00000584374 ADRA2BP18089 450 aa22.45■■□□□ 1.18
ITGB4-211ENST00000584374 ZNF790Q6PG37 636 aa22.45■■□□□ 1.18
ITGB4-211ENST00000584374 MCM10Q7L590 875 aa22.45■■□□□ 1.18
ITGB4-211ENST00000584374 VSIG10Q8N0Z9 540 aa22.45■■□□□ 1.18
ITGB4-211ENST00000584374 PNISRQ8TF01 805 aaKnown RBP22.45■■□□□ 1.18
ITGB4-211ENST00000584374 ARHGEF1Q92888 912 aaKnown RBP22.45■■□□□ 1.18
ITGB4-211ENST00000584374 DCTN1Q14203 1278 aa22.44■■□□□ 1.18
ITGB4-211ENST00000584374 TRAPPC3LQ5T215 181 aa22.44■■□□□ 1.18
ITGB4-211ENST00000584374 ZNF496Q96IT1 587 aaPredicted RBP22.44■■□□□ 1.18
ITGB4-211ENST00000584374 HTATSF1O43719 755 aaKnown RBP22.43■■□□□ 1.18
ITGB4-211ENST00000584374 KCNQ3O43525 872 aa22.42■■□□□ 1.18
ITGB4-211ENST00000584374 UTRNP46939 3433 aa22.42■■□□□ 1.18
ITGB4-211ENST00000584374 HEG1Q9ULI3 1381 aa22.41■■□□□ 1.18
ITGB4-211ENST00000584374 MAPK8IP3Q9UPT6 1336 aa22.41■■□□□ 1.18
ITGB4-211ENST00000584374 NLGN2Q8NFZ4 835 aa22.41■■□□□ 1.18
ITGB4-211ENST00000584374 CCDC87Q9NVE4 849 aa22.41■■□□□ 1.18
ITGB4-211ENST00000584374 DLG5Q8TDM6 1919 aa22.41■■□□□ 1.18
ITGB4-211ENST00000584374 SOS1Q07889 1333 aaPredicted RBP22.4■■□□□ 1.18
ITGB4-211ENST00000584374 GYS1P13807 737 aa22.4■■□□□ 1.18
ITGB4-211ENST00000584374 NFE2L2Q16236 605 aa22.4■■□□□ 1.18
ITGB4-211ENST00000584374 TTC5Q8N0Z6 440 aa22.4■■□□□ 1.18
ITGB4-211ENST00000584374 RTF1Q92541 710 aaKnown RBP22.4■■□□□ 1.18
ITGB4-211ENST00000584374 ADAMTS8Q9UP79 889 aa22.4■■□□□ 1.18
ITGB4-211ENST00000584374 BTBD11A6QL63 1104 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms