RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 AMIGO3Q86WK7 504 aa28.94■■■□□ 2.22
PPP4R1-228ENST00000584074 SYT17Q9BSW7 474 aa28.94■■■□□ 2.22
PPP4R1-228ENST00000584074 U2SURPO15042 1029 aaKnown RBP28.92■■■□□ 2.22
PPP4R1-228ENST00000584074 POLD1P28340 1107 aa28.92■■■□□ 2.22
PPP4R1-228ENST00000584074 AKAP4Q5JQC9 854 aa28.92■■■□□ 2.22
PPP4R1-228ENST00000584074 SMIM5Q71RC9 77 aa28.92■■■□□ 2.22
PPP4R1-228ENST00000584074 NFATC2IPQ8NCF5 419 aa28.91■■■□□ 2.22
PPP4R1-228ENST00000584074 FLAD1Q8NFF5 587 aa28.91■■■□□ 2.22
PPP4R1-228ENST00000584074 SLC4A9Q96Q91 983 aa28.9■■■□□ 2.22
PPP4R1-228ENST00000584074 RBM42Q9BTD8 480 aaKnown RBP28.9■■■□□ 2.22
PPP4R1-228ENST00000584074 MTHFSDQ2M296 383 aaKnown RBP28.89■■■□□ 2.22
PPP4R1-228ENST00000584074 MSL1Q68DK7 614 aa28.89■■■□□ 2.22
PPP4R1-228ENST00000584074 PHF14O94880 888 aa28.88■■■□□ 2.21
PPP4R1-228ENST00000584074 PPP2R1AP30153 589 aa28.88■■■□□ 2.21
PPP4R1-228ENST00000584074 LGR6Q9HBX8 967 aa28.88■■■□□ 2.21
PPP4R1-228ENST00000584074 COL24A1Q17RW2 1714 aa28.87■■■□□ 2.21
PPP4R1-228ENST00000584074 DCAF8L1A6NGE4 600 aa28.87■■■□□ 2.21
PPP4R1-228ENST00000584074 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.86■■■□□ 2.21
PPP4R1-228ENST00000584074 CFAP53Q96M91 514 aa28.86■■■□□ 2.21
PPP4R1-228ENST00000584074 GNPATO15228 680 aa28.85■■■□□ 2.21
PPP4R1-228ENST00000584074 KLHL34Q8N239 644 aa28.85■■■□□ 2.21
PPP4R1-228ENST00000584074 MAP3K5Q99683 1374 aa28.85■■■□□ 2.21
PPP4R1-228ENST00000584074 PTCD1O75127 700 aaKnown RBP28.84■■■□□ 2.21
PPP4R1-228ENST00000584074 SSFA2P28290 1259 aa28.84■■■□□ 2.21
PPP4R1-228ENST00000584074 RNMTO43148 476 aaKnown RBP28.83■■■□□ 2.21
PPP4R1-228ENST00000584074 SLC52A2Q9HAB3 445 aa28.82■■■□□ 2.2
PPP4R1-228ENST00000584074 UBR3Q6ZT12 1888 aa28.82■■■□□ 2.2
PPP4R1-228ENST00000584074 SCN11AQ9UI33 1791 aa28.81■■■□□ 2.2
PPP4R1-228ENST00000584074 ZNF831Q5JPB2 1677 aa28.78■■■□□ 2.2
PPP4R1-228ENST00000584074 RSPH6AQ9H0K4 717 aa28.77■■■□□ 2.2
PPP4R1-228ENST00000584074 NUDCQ9Y266 331 aa28.77■■■□□ 2.2
PPP4R1-228ENST00000584074 UTRNP46939 3433 aa28.76■■■□□ 2.2
PPP4R1-228ENST00000584074 RC3H1Q5TC82 1133 aaKnown RBP28.76■■■□□ 2.19
PPP4R1-228ENST00000584074 RTCBQ9Y3I0 505 aaKnown RBP28.76■■■□□ 2.19
PPP4R1-228ENST00000584074 MRC1P22897 1456 aa28.76■■■□□ 2.19
PPP4R1-228ENST00000584074 CNTNAP4Q9C0A0 1308 aa28.75■■■□□ 2.19
PPP4R1-228ENST00000584074 PRKAR2BP31323 418 aa28.75■■■□□ 2.19
PPP4R1-228ENST00000584074 NLGN2Q8NFZ4 835 aa28.75■■■□□ 2.19
PPP4R1-228ENST00000584074 GAS2L2Q8NHY3 880 aa28.75■■■□□ 2.19
PPP4R1-228ENST00000584074 PHACTR3Q96KR7 559 aa28.75■■■□□ 2.19
PPP4R1-228ENST00000584074 U2AF1L5P0DN76 240 aaPredicted RBP28.74■■■□□ 2.19
PPP4R1-228ENST00000584074 U2AF1Q01081 240 aaKnown RBP eCLIP28.74■■■□□ 2.19
PPP4R1-228ENST00000584074 SLC39A6Q13433 755 aa28.74■■■□□ 2.19
PPP4R1-228ENST00000584074 ADAMTS7Q9UKP4 1686 aa28.74■■■□□ 2.19
PPP4R1-228ENST00000584074 COL5A3P25940 1745 aaPredicted RBP28.73■■■□□ 2.19
PPP4R1-228ENST00000584074 TRAPPC3LQ5T215 181 aa28.73■■■□□ 2.19
PPP4R1-228ENST00000584074 GNAT3A8MTJ3 354 aa28.72■■■□□ 2.19
PPP4R1-228ENST00000584074 RPS6KA4O75676 772 aa28.71■■■□□ 2.19
PPP4R1-228ENST00000584074 CRKLP46109 303 aaKnown RBP28.71■■■□□ 2.19
PPP4R1-228ENST00000584074 IL17REQ8NFR9 667 aa28.71■■■□□ 2.19
PPP4R1-228ENST00000584074 GOLGB1Q14789 3259 aaKnown RBP28.7■■■□□ 2.18
PPP4R1-228ENST00000584074 YY1P25490 414 aa28.7■■■□□ 2.18
PPP4R1-228ENST00000584074 ARHGEF1Q92888 912 aaKnown RBP28.7■■■□□ 2.18
PPP4R1-228ENST00000584074 ADRA2BP18089 450 aa28.68■■■□□ 2.18
PPP4R1-228ENST00000584074 DNAJC10Q8IXB1 793 aa28.68■■■□□ 2.18
PPP4R1-228ENST00000584074 TJP1Q07157 1748 aa28.68■■■□□ 2.18
PPP4R1-228ENST00000584074 FCHSD2O94868 740 aa28.67■■■□□ 2.18
PPP4R1-228ENST00000584074 GPR162Q16538 588 aa28.67■■■□□ 2.18
PPP4R1-228ENST00000584074 KCPQ6ZWJ8 1503 aa28.66■■■□□ 2.18
PPP4R1-228ENST00000584074 TEFQ10587 303 aa28.66■■■□□ 2.18
PPP4R1-228ENST00000584074 DDX10Q13206 875 aaKnown RBP28.66■■■□□ 2.18
PPP4R1-228ENST00000584074 CD2APQ9Y5K6 639 aa28.66■■■□□ 2.18
PPP4R1-228ENST00000584074 VIRMAQ69YN4 1812 aaKnown RBP28.65■■■□□ 2.18
PPP4R1-228ENST00000584074 RFC4P35249 363 aa28.65■■■□□ 2.18
PPP4R1-228ENST00000584074 INTS5Q6P9B9 1019 aaKnown RBP28.65■■■□□ 2.18
PPP4R1-228ENST00000584074 PELP1Q8IZL8 1130 aaKnown RBP28.65■■■□□ 2.18
PPP4R1-228ENST00000584074 CICQ96RK0 1608 aaPredicted RBP28.65■■■□□ 2.18
PPP4R1-228ENST00000584074 MYH14Q7Z406 1995 aaKnown RBP28.64■■■□□ 2.17
PPP4R1-228ENST00000584074 MMP10P09238 476 aa28.63■■■□□ 2.17
PPP4R1-228ENST00000584074 CYP19A1P11511 503 aaPredicted RBP28.62■■■□□ 2.17
PPP4R1-228ENST00000584074 NLGN1Q8N2Q7 840 aa28.62■■■□□ 2.17
PPP4R1-228ENST00000584074 CCDC87Q9NVE4 849 aa28.62■■■□□ 2.17
PPP4R1-228ENST00000584074 CEMIPQ8WUJ3 1361 aa28.62■■■□□ 2.17
PPP4R1-228ENST00000584074 GYS1P13807 737 aa28.61■■■□□ 2.17
PPP4R1-228ENST00000584074 TTC5Q8N0Z6 440 aa28.61■■■□□ 2.17
PPP4R1-228ENST00000584074 VSIG10Q8N0Z9 540 aa28.6■■■□□ 2.17
PPP4R1-228ENST00000584074 ZNF790Q6PG37 636 aa28.59■■■□□ 2.17
PPP4R1-228ENST00000584074 SRP68Q9UHB9 627 aaKnown RBP28.59■■■□□ 2.17
PPP4R1-228ENST00000584074 YBX3P16989 372 aaKnown RBP eCLIP28.57■■■□□ 2.16
PPP4R1-228ENST00000584074 RALBP1Q15311 655 aa28.57■■■□□ 2.16
PPP4R1-228ENST00000584074 ZNF496Q96IT1 587 aaPredicted RBP28.57■■■□□ 2.16
PPP4R1-228ENST00000584074 C4AP0C0L4 1744 aa28.56■■■□□ 2.16
PPP4R1-228ENST00000584074 MCM10Q7L590 875 aa28.56■■■□□ 2.16
PPP4R1-228ENST00000584074 UBR2Q8IWV8 1755 aa28.55■■■□□ 2.16
PPP4R1-228ENST00000584074 SOS1Q07889 1333 aaPredicted RBP28.55■■■□□ 2.16
PPP4R1-228ENST00000584074 USP42Q9H9J4 1324 aaKnown RBP28.55■■■□□ 2.16
PPP4R1-228ENST00000584074 RTF1Q92541 710 aaKnown RBP28.55■■■□□ 2.16
PPP4R1-228ENST00000584074 ZBTB1Q9Y2K1 713 aa28.55■■■□□ 2.16
PPP4R1-228ENST00000584074 SIPA1L3O60292 1781 aaPredicted RBP28.55■■■□□ 2.16
PPP4R1-228ENST00000584074 BTBD11A6QL63 1104 aa28.54■■■□□ 2.16
PPP4R1-228ENST00000584074 DCTN1Q14203 1278 aa28.54■■■□□ 2.16
PPP4R1-228ENST00000584074 KCNQ3O43525 872 aa28.53■■■□□ 2.16
PPP4R1-228ENST00000584074 FKBP8Q14318 412 aa28.53■■■□□ 2.16
PPP4R1-228ENST00000584074 HEG1Q9ULI3 1381 aa28.52■■■□□ 2.16
PPP4R1-228ENST00000584074 STARD3NLO95772 234 aa28.51■■■□□ 2.15
PPP4R1-228ENST00000584074 PLEKHF1Q96S99 279 aa28.51■■■□□ 2.15
PPP4R1-228ENST00000584074 HTATSF1O43719 755 aaKnown RBP28.5■■■□□ 2.15
PPP4R1-228ENST00000584074 CANXP27824 592 aaKnown RBP28.5■■■□□ 2.15
PPP4R1-228ENST00000584074 FMNL2Q96PY5 1086 aa28.5■■■□□ 2.15
PPP4R1-228ENST00000584074 PARP3Q9Y6F1 533 aa28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms