RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 C4AP0C0L4 1744 aa21.5■■□□□ 1.03
SKA2-209ENST00000583976 GNPATO15228 680 aa21.5■■□□□ 1.03
SKA2-209ENST00000583976 ATG3Q9NT62 314 aa21.5■■□□□ 1.03
SKA2-209ENST00000583976 ATP10DQ9P241 1426 aa21.49■■□□□ 1.03
SKA2-209ENST00000583976 SSFA2P28290 1259 aa21.49■■□□□ 1.03
SKA2-209ENST00000583976 CD2APQ9Y5K6 639 aa21.49■■□□□ 1.03
SKA2-209ENST00000583976 ZNF831Q5JPB2 1677 aa21.49■■□□□ 1.03
SKA2-209ENST00000583976 AEBP1Q8IUX7 1158 aa21.48■■□□□ 1.03
SKA2-209ENST00000583976 PLEKHG2Q9H7P9 1386 aa21.48■■□□□ 1.03
SKA2-209ENST00000583976 CICQ96RK0 1608 aaPredicted RBP21.47■■□□□ 1.03
SKA2-209ENST00000583976 GIGYF1O75420 1035 aaPredicted RBP21.47■■□□□ 1.03
SKA2-209ENST00000583976 ATP6V1AP38606 617 aa21.47■■□□□ 1.03
SKA2-209ENST00000583976 SLC4A9Q96Q91 983 aa21.47■■□□□ 1.03
SKA2-209ENST00000583976 GRIN3BO60391 1043 aa21.46■■□□□ 1.03
SKA2-209ENST00000583976 ADCY9O60503 1353 aa21.46■■□□□ 1.03
SKA2-209ENST00000583976 CEP350Q5VT06 3117 aa21.45■■□□□ 1.02
SKA2-209ENST00000583976 ZEB1P37275 1124 aaPredicted RBP21.45■■□□□ 1.02
SKA2-209ENST00000583976 TJP1Q07157 1748 aa21.45■■□□□ 1.02
SKA2-209ENST00000583976 KIF13BQ9NQT8 1826 aa21.45■■□□□ 1.02
SKA2-209ENST00000583976 N4BP2Q86UW6 1770 aaPredicted RBP21.43■■□□□ 1.02
SKA2-209ENST00000583976 MYH14Q7Z406 1995 aaKnown RBP21.43■■□□□ 1.02
SKA2-209ENST00000583976 ZNF530Q6P9A1 599 aaPredicted RBP21.43■■□□□ 1.02
SKA2-209ENST00000583976 PXDNLA1KZ92 1463 aa21.43■■□□□ 1.02
SKA2-209ENST00000583976 HMGB2P26583 209 aaKnown RBP21.41■■□□□ 1.02
SKA2-209ENST00000583976 SCN11AQ9UI33 1791 aa21.41■■□□□ 1.02
SKA2-209ENST00000583976 C10orf71Q711Q0 1435 aa21.4■■□□□ 1.02
SKA2-209ENST00000583976 MMP10P09238 476 aa21.4■■□□□ 1.02
SKA2-209ENST00000583976 MORC1Q86VD1 984 aa21.4■■□□□ 1.02
SKA2-209ENST00000583976 RBM42Q9BTD8 480 aaKnown RBP21.4■■□□□ 1.02
SKA2-209ENST00000583976 DCAF5Q96JK2 942 aa21.39■■□□□ 1.01
SKA2-209ENST00000583976 ERVV-2B6SEH9 535 aa21.38■■□□□ 1.01
SKA2-209ENST00000583976 PLEKHO1Q53GL0 409 aaPredicted RBP21.38■■□□□ 1.01
SKA2-209ENST00000583976 ZNF526Q8TF50 670 aaPredicted RBP21.38■■□□□ 1.01
SKA2-209ENST00000583976 VIRMAQ69YN4 1812 aaKnown RBP21.38■■□□□ 1.01
SKA2-209ENST00000583976 CNTNAP4Q9C0A0 1308 aa21.37■■□□□ 1.01
SKA2-209ENST00000583976 BRCA1P38398 1863 aaKnown RBP21.37■■□□□ 1.01
SKA2-209ENST00000583976 HSP90AB1P08238 724 aaKnown RBP21.36■■□□□ 1.01
SKA2-209ENST00000583976 CABP4P57796 275 aa21.36■■□□□ 1.01
SKA2-209ENST00000583976 SULT6B1Q6IMI4 303 aa21.36■■□□□ 1.01
SKA2-209ENST00000583976 RTCBQ9Y3I0 505 aaKnown RBP21.36■■□□□ 1.01
SKA2-209ENST00000583976 ADAMTS7Q9UKP4 1686 aa21.35■■□□□ 1.01
SKA2-209ENST00000583976 MRC1P22897 1456 aa21.34■■□□□ 1.01
SKA2-209ENST00000583976 PTCD1O75127 700 aaKnown RBP21.34■■□□□ 1.01
SKA2-209ENST00000583976 IL13P35225 146 aa21.34■■□□□ 1.01
SKA2-209ENST00000583976 AMOTQ4VCS5 1084 aa21.34■■□□□ 1.01
SKA2-209ENST00000583976 ARHGEF1Q92888 912 aaKnown RBP21.34■■□□□ 1.01
SKA2-209ENST00000583976 KIF7Q2M1P5 1343 aa21.33■■□□□ 1.01
SKA2-209ENST00000583976 MTHFSP49914 203 aa21.33■■□□□ 1.01
SKA2-209ENST00000583976 AMER1Q5JTC6 1135 aaPredicted RBP21.33■■□□□ 1.01
SKA2-209ENST00000583976 C1orf141Q5JVX7 400 aa21.33■■□□□ 1.01
SKA2-209ENST00000583976 TRAPPC3LQ5T215 181 aa21.33■■□□□ 1.01
SKA2-209ENST00000583976 GYS1P13807 737 aa21.32■■□□□ 1
SKA2-209ENST00000583976 GPBP1L1Q9HC44 474 aaPredicted RBP21.32■■□□□ 1
SKA2-209ENST00000583976 KNSTRNQ9Y448 316 aa21.32■■□□□ 1
SKA2-209ENST00000583976 RPS6KA4O75676 772 aa21.3■■□□□ 1
SKA2-209ENST00000583976 ADRA2BP18089 450 aa21.3■■□□□ 1
SKA2-209ENST00000583976 RC3H1Q5TC82 1133 aaKnown RBP21.3■■□□□ 1
SKA2-209ENST00000583976 NFATC2IPQ8NCF5 419 aa21.3■■□□□ 1
SKA2-209ENST00000583976 SRP68Q9UHB9 627 aaKnown RBP21.3■■□□□ 1
SKA2-209ENST00000583976 KCPQ6ZWJ8 1503 aa21.29■■□□□ 1
SKA2-209ENST00000583976 CRKLP46109 303 aaKnown RBP21.29■■□□□ 1
SKA2-209ENST00000583976 A0A0G2JLW4 131 aa21.28■■□□□ 1
SKA2-209ENST00000583976 RFC4P35249 363 aa21.28■■□□□ 1
SKA2-209ENST00000583976 COL3A1P02461 1466 aaPredicted RBP21.27■■□□□ 1
SKA2-209ENST00000583976 HMOX1P09601 288 aa21.27■■□□□ 1
SKA2-209ENST00000583976 NLGN1Q8N2Q7 840 aa21.27■■□□□ 1
SKA2-209ENST00000583976 BCS1LQ9Y276 419 aa21.27■■□□□ 1
SKA2-209ENST00000583976 UBR2Q8IWV8 1755 aa21.26■□□□□ 0.99
SKA2-209ENST00000583976 DPEP1P16444 411 aa21.26■□□□□ 0.99
SKA2-209ENST00000583976 ARFGEF1Q9Y6D6 1849 aa21.26■□□□□ 0.99
SKA2-209ENST00000583976 USP42Q9H9J4 1324 aaKnown RBP21.26■□□□□ 0.99
SKA2-209ENST00000583976 DDR1Q08345 913 aa21.25■□□□□ 0.99
SKA2-209ENST00000583976 FKBP8Q14318 412 aa21.25■□□□□ 0.99
SKA2-209ENST00000583976 CCDC87Q9NVE4 849 aa21.25■□□□□ 0.99
SKA2-209ENST00000583976 LGR6Q9HBX8 967 aa21.24■□□□□ 0.99
SKA2-209ENST00000583976 AKAP4Q5JQC9 854 aa21.23■□□□□ 0.99
SKA2-209ENST00000583976 CC2D1BQ5T0F9 858 aaKnown RBP21.23■□□□□ 0.99
SKA2-209ENST00000583976 INTS5Q6P9B9 1019 aaKnown RBP21.23■□□□□ 0.99
SKA2-209ENST00000583976 DNAJC10Q8IXB1 793 aa21.23■□□□□ 0.99
SKA2-209ENST00000583976 SLC52A2Q9HAB3 445 aa21.23■□□□□ 0.99
SKA2-209ENST00000583976 PARP3Q9Y6F1 533 aa21.23■□□□□ 0.99
SKA2-209ENST00000583976 TGFB2P61812 414 aa21.22■□□□□ 0.99
SKA2-209ENST00000583976 SLC39A6Q13433 755 aa21.22■□□□□ 0.99
SKA2-209ENST00000583976 AFDNP55196 1824 aaKnown RBP21.21■□□□□ 0.99
SKA2-209ENST00000583976 KIF3CO14782 793 aa21.21■□□□□ 0.99
SKA2-209ENST00000583976 CNGB1Q14028 1251 aaPredicted RBP21.2■□□□□ 0.98
SKA2-209ENST00000583976 SOS1Q07889 1333 aaPredicted RBP21.2■□□□□ 0.98
SKA2-209ENST00000583976 RNMTO43148 476 aaKnown RBP21.19■□□□□ 0.98
SKA2-209ENST00000583976 FCHSD2O94868 740 aa21.19■□□□□ 0.98
SKA2-209ENST00000583976 KCNA3P22001 575 aa21.19■□□□□ 0.98
SKA2-209ENST00000583976 MTHFSDQ2M296 383 aaKnown RBP21.19■□□□□ 0.98
SKA2-209ENST00000583976 NRXN2Q9P2S2 1712 aa21.18■□□□□ 0.98
SKA2-209ENST00000583976 SIPA1L3O60292 1781 aaPredicted RBP21.18■□□□□ 0.98
SKA2-209ENST00000583976 PER1O15534 1290 aaPredicted RBP21.18■□□□□ 0.98
SKA2-209ENST00000583976 COL15A1P39059 1388 aa21.18■□□□□ 0.98
SKA2-209ENST00000583976 ARHGAP27Q6ZUM4 889 aa21.17■□□□□ 0.98
SKA2-209ENST00000583976 ZBTB1Q9Y2K1 713 aa21.17■□□□□ 0.98
SKA2-209ENST00000583976 SCN7AQ01118 1682 aa21.17■□□□□ 0.98
SKA2-209ENST00000583976 DLEC1Q9Y238 1755 aa21.16■□□□□ 0.98
SKA2-209ENST00000583976 POLRMTO00411 1230 aaKnown RBP21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms