RNA–Protein interactions for RNA: ENST00000583844.5

SKAP1-206, Transcript of src kinase associated phosphoprotein 1, humanhuman

TSL 3

Gene SKAP1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP1-206ENST00000583844 DALRD3Q5D0E6 543 aaKnown RBP12.28□□□□□ -0.44
SKAP1-206ENST00000583844 RAPGEF4Q8WZA2 1011 aa12.28□□□□□ -0.44
SKAP1-206ENST00000583844 PCDH11XQ9BZA7 1347 aa12.28□□□□□ -0.44
SKAP1-206ENST00000583844 PCDH11YQ9BZA8 1340 aa12.28□□□□□ -0.44
SKAP1-206ENST00000583844 GLTPD2A6NH11 291 aa12.27□□□□□ -0.45
SKAP1-206ENST00000583844 TATP17735 454 aaPredicted RBP12.27□□□□□ -0.45
SKAP1-206ENST00000583844 AMPHP49418 695 aa12.27□□□□□ -0.45
SKAP1-206ENST00000583844 CTCFP49711 727 aaPredicted RBP12.27□□□□□ -0.45
SKAP1-206ENST00000583844 MLLT1Q03111 559 aaPredicted RBP12.27□□□□□ -0.45
SKAP1-206ENST00000583844 BRCA1P38398 1863 aaKnown RBP12.27□□□□□ -0.45
SKAP1-206ENST00000583844 POTECB2RU33 542 aa12.26□□□□□ -0.45
SKAP1-206ENST00000583844 TRAPPC3LQ5T215 181 aa12.26□□□□□ -0.45
SKAP1-206ENST00000583844 CREBZFQ9NS37 354 aa12.26□□□□□ -0.45
SKAP1-206ENST00000583844 ZC3H4Q9UPT8 1303 aaKnown RBP12.26□□□□□ -0.45
SKAP1-206ENST00000583844 EDC4Q6P2E9 1401 aaKnown RBP12.26□□□□□ -0.45
SKAP1-206ENST00000583844 RGPD2P0DJD1 1756 aa12.25□□□□□ -0.45
SKAP1-206ENST00000583844 GYS1P13807 737 aa12.25□□□□□ -0.45
SKAP1-206ENST00000583844 ATP6V1AP38606 617 aa12.25□□□□□ -0.45
SKAP1-206ENST00000583844 LBX1P52954 281 aa12.25□□□□□ -0.45
SKAP1-206ENST00000583844 RASSF7Q02833 373 aa12.25□□□□□ -0.45
SKAP1-206ENST00000583844 HDGFL2Q7Z4V5 671 aaPredicted RBP12.25□□□□□ -0.45
SKAP1-206ENST00000583844 TMC1Q8TDI8 760 aa12.25□□□□□ -0.45
SKAP1-206ENST00000583844 ARHGEF1Q92888 912 aaKnown RBP12.25□□□□□ -0.45
SKAP1-206ENST00000583844 SLC12A5Q9H2X9 1139 aa12.25□□□□□ -0.45
SKAP1-206ENST00000583844 PARP3Q9Y6F1 533 aa12.25□□□□□ -0.45
SKAP1-206ENST00000583844 MAP2P11137 1827 aaKnown RBP12.25□□□□□ -0.45
SKAP1-206ENST00000583844 ARFGEF1Q9Y6D6 1849 aa12.25□□□□□ -0.45
SKAP1-206ENST00000583844 KDM6AO15550 1401 aaPredicted RBP12.24□□□□□ -0.45
SKAP1-206ENST00000583844 CHRNA5P30532 468 aa12.24□□□□□ -0.45
SKAP1-206ENST00000583844 RGS19P49795 217 aa12.24□□□□□ -0.45
SKAP1-206ENST00000583844 ASAP1Q9ULH1 1129 aa12.24□□□□□ -0.45
SKAP1-206ENST00000583844 RTCBQ9Y3I0 505 aaKnown RBP12.24□□□□□ -0.45
SKAP1-206ENST00000583844 C4AP0C0L4 1744 aa12.23□□□□□ -0.45
SKAP1-206ENST00000583844 CNTNAP1P78357 1384 aa12.23□□□□□ -0.45
SKAP1-206ENST00000583844 AIDAQ96BJ3 306 aa12.23□□□□□ -0.45
SKAP1-206ENST00000583844 A0A1W2PP64 1363 aa12.22□□□□□ -0.45
SKAP1-206ENST00000583844 WBP1LQ9NX94 342 aa12.22□□□□□ -0.45
SKAP1-206ENST00000583844 SBF1O95248 1867 aa12.21□□□□□ -0.45
SKAP1-206ENST00000583844 LMNB1P20700 586 aa12.21□□□□□ -0.45
SKAP1-206ENST00000583844 VEGFBP49765 207 aa12.21□□□□□ -0.45
SKAP1-206ENST00000583844 NKX1-1Q15270 411 aaPredicted RBP12.21□□□□□ -0.45
SKAP1-206ENST00000583844 COG3Q96JB2 828 aa12.21□□□□□ -0.45
SKAP1-206ENST00000583844 CCDC85CA6NKD9 419 aa12.2□□□□□ -0.46
SKAP1-206ENST00000583844 HSPA8P11142 646 aaKnown RBP12.2□□□□□ -0.46
SKAP1-206ENST00000583844 ADRA2BP18089 450 aa12.2□□□□□ -0.46
SKAP1-206ENST00000583844 RFC4P35249 363 aa12.2□□□□□ -0.46
SKAP1-206ENST00000583844 RRS1Q15050 365 aaKnown RBP12.2□□□□□ -0.46
SKAP1-206ENST00000583844 CHADLQ6NUI6 762 aa12.2□□□□□ -0.46
SKAP1-206ENST00000583844 ATG3Q9NT62 314 aa12.2□□□□□ -0.46
SKAP1-206ENST00000583844 TERF2IPQ9NYB0 399 aa12.2□□□□□ -0.46
SKAP1-206ENST00000583844 ITGB4P16144 1822 aa12.2□□□□□ -0.46
SKAP1-206ENST00000583844 RTL1A6NKG5 1358 aa12.19□□□□□ -0.46
SKAP1-206ENST00000583844 POTEIP0CG38 1075 aa12.19□□□□□ -0.46
SKAP1-206ENST00000583844 POTEJP0CG39 1038 aa12.19□□□□□ -0.46
SKAP1-206ENST00000583844 DDR1Q08345 913 aa12.19□□□□□ -0.46
SKAP1-206ENST00000583844 SLC4A9Q96Q91 983 aa12.19□□□□□ -0.46
SKAP1-206ENST00000583844 TMOD3Q9NYL9 352 aa12.19□□□□□ -0.46
SKAP1-206ENST00000583844 RPS6KA4O75676 772 aa12.18□□□□□ -0.46
SKAP1-206ENST00000583844 KDRP35968 1356 aa12.18□□□□□ -0.46
SKAP1-206ENST00000583844 HSP90AB2PQ58FF8 381 aa12.17□□□□□ -0.46
SKAP1-206ENST00000583844 RC3H1Q5TC82 1133 aaKnown RBP12.17□□□□□ -0.46
SKAP1-206ENST00000583844 SMG6Q86US8 1419 aaKnown RBP12.17□□□□□ -0.46
SKAP1-206ENST00000583844 ROCK2O75116 1388 aaKnown RBP12.17□□□□□ -0.46
SKAP1-206ENST00000583844 PASKQ96RG2 1323 aa12.16□□□□□ -0.46
SKAP1-206ENST00000583844 NFKBIEO00221 500 aa12.16□□□□□ -0.46
SKAP1-206ENST00000583844 FKBP8Q14318 412 aa12.16□□□□□ -0.46
SKAP1-206ENST00000583844 DPY19L2Q6NUT2 758 aa12.16□□□□□ -0.46
SKAP1-206ENST00000583844 L3MBTL2Q969R5 705 aa12.16□□□□□ -0.46
SKAP1-206ENST00000583844 SRP68Q9UHB9 627 aaKnown RBP12.16□□□□□ -0.46
SKAP1-206ENST00000583844 CNTNAP4Q9C0A0 1308 aa12.15□□□□□ -0.46
SKAP1-206ENST00000583844 INSRP06213 1382 aa12.15□□□□□ -0.46
SKAP1-206ENST00000583844 POLRMTO00411 1230 aaKnown RBP12.14□□□□□ -0.47
SKAP1-206ENST00000583844 RBM42Q9BTD8 480 aaKnown RBP12.14□□□□□ -0.47
SKAP1-206ENST00000583844 TMEM88BA6NKF7 163 aa12.13□□□□□ -0.47
SKAP1-206ENST00000583844 SPG7Q9UQ90 795 aa12.13□□□□□ -0.47
SKAP1-206ENST00000583844 USP42Q9H9J4 1324 aaKnown RBP12.12□□□□□ -0.47
SKAP1-206ENST00000583844 TM4SF1P30408 202 aa12.12□□□□□ -0.47
SKAP1-206ENST00000583844 DDNO94850 711 aaPredicted RBP12.11□□□□□ -0.47
SKAP1-206ENST00000583844 ITGBL1O95965 494 aaPredicted RBP12.11□□□□□ -0.47
SKAP1-206ENST00000583844 PHKG2P15735 406 aa12.11□□□□□ -0.47
SKAP1-206ENST00000583844 MAP2K1Q02750 393 aaPredicted RBP12.11□□□□□ -0.47
SKAP1-206ENST00000583844 TTLL6Q8N841 843 aa12.11□□□□□ -0.47
SKAP1-206ENST00000583844 GGNBP2Q9H3C7 697 aa12.11□□□□□ -0.47
SKAP1-206ENST00000583844 TIAM2Q8IVF5 1701 aa12.11□□□□□ -0.47
SKAP1-206ENST00000583844 RASSF10A6NK89 507 aa12.1□□□□□ -0.47
SKAP1-206ENST00000583844 ERFEQ4G0M1 354 aa12.1□□□□□ -0.47
SKAP1-206ENST00000583844 IFNL2Q8IZJ0 200 aa12.1□□□□□ -0.47
SKAP1-206ENST00000583844 CFAP44Q96MT7 982 aa12.1□□□□□ -0.47
SKAP1-206ENST00000583844 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.1□□□□□ -0.47
SKAP1-206ENST00000583844 WDR33Q9C0J8 1336 aaKnown RBP12.1□□□□□ -0.47
SKAP1-206ENST00000583844 VIRMAQ69YN4 1812 aaKnown RBP12.09□□□□□ -0.47
SKAP1-206ENST00000583844 FLT4P35916 1363 aa12.09□□□□□ -0.47
SKAP1-206ENST00000583844 FYB1O15117 783 aa12.09□□□□□ -0.47
SKAP1-206ENST00000583844 DEFB115Q30KQ5 88 aa12.09□□□□□ -0.47
SKAP1-206ENST00000583844 LDHDQ86WU2 507 aa12.09□□□□□ -0.47
SKAP1-206ENST00000583844 PUS7Q96PZ0 661 aaKnown RBP12.09□□□□□ -0.47
SKAP1-206ENST00000583844 NCAPD2Q15021 1401 aa12.09□□□□□ -0.47
SKAP1-206ENST00000583844 CRKLP46109 303 aaKnown RBP12.08□□□□□ -0.48
SKAP1-206ENST00000583844 PDE4DIPQ5VU43 2346 aa12.08□□□□□ -0.48
SKAP1-206ENST00000583844 MYH14Q7Z406 1995 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms