RNA–Protein interactions for RNA: ENST00000583796.1

IFT20-213, Transcript of intraflagellar transport 20, humanhuman

Gene IFT20, Length 1,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-213ENST00000583796 RAPGEF4Q8WZA2 1011 aa13□□□□□ -0.33
IFT20-213ENST00000583796 ROBO1Q9Y6N7 1651 aa13□□□□□ -0.33
IFT20-213ENST00000583796 VIRMAQ69YN4 1812 aaKnown RBP12.98□□□□□ -0.33
IFT20-213ENST00000583796 CHRDL2Q6WN34 429 aa12.98□□□□□ -0.33
IFT20-213ENST00000583796 SIPA1L3O60292 1781 aaPredicted RBP12.98□□□□□ -0.33
IFT20-213ENST00000583796 COL5A2P05997 1499 aaPredicted RBP12.98□□□□□ -0.33
IFT20-213ENST00000583796 WDR17Q8IZU2 1322 aa12.98□□□□□ -0.33
IFT20-213ENST00000583796 TATP17735 454 aaPredicted RBP12.97□□□□□ -0.33
IFT20-213ENST00000583796 ITPRIPQ8IWB1 547 aa12.97□□□□□ -0.33
IFT20-213ENST00000583796 RWDD1Q9H446 243 aaPredicted RBP12.97□□□□□ -0.33
IFT20-213ENST00000583796 PRDM11Q9NQV5 511 aa12.97□□□□□ -0.33
IFT20-213ENST00000583796 NLRP2Q9NX02 1062 aa12.97□□□□□ -0.33
IFT20-213ENST00000583796 SPG7Q9UQ90 795 aa12.97□□□□□ -0.33
IFT20-213ENST00000583796 MRC1P22897 1456 aa12.97□□□□□ -0.33
IFT20-213ENST00000583796 CSB-PGBD3P0DP91 1061 aa12.97□□□□□ -0.33
IFT20-213ENST00000583796 TEFQ10587 303 aa12.97□□□□□ -0.33
IFT20-213ENST00000583796 CCDC30Q5VVM6 783 aa12.97□□□□□ -0.33
IFT20-213ENST00000583796 TMEM57Q8N5G2 664 aa12.97□□□□□ -0.33
IFT20-213ENST00000583796 CABLES1Q8TDN4 633 aa12.97□□□□□ -0.33
IFT20-213ENST00000583796 SCN11AQ9UI33 1791 aa12.96□□□□□ -0.33
IFT20-213ENST00000583796 MEGF6O75095 1541 aa12.96□□□□□ -0.34
IFT20-213ENST00000583796 ELL2O00472 640 aaPredicted RBP12.96□□□□□ -0.34
IFT20-213ENST00000583796 RNMTO43148 476 aaKnown RBP12.96□□□□□ -0.34
IFT20-213ENST00000583796 HSP90AB1P08238 724 aaKnown RBP12.96□□□□□ -0.34
IFT20-213ENST00000583796 HDAC1Q13547 482 aaPredicted RBP12.96□□□□□ -0.34
IFT20-213ENST00000583796 STK31Q9BXU1 1019 aa12.96□□□□□ -0.34
IFT20-213ENST00000583796 ZBTB40Q9NUA8 1239 aa12.96□□□□□ -0.34
IFT20-213ENST00000583796 TNNQ9UQP3 1299 aa12.95□□□□□ -0.34
IFT20-213ENST00000583796 RGS12O14924 1447 aa12.95□□□□□ -0.34
IFT20-213ENST00000583796 COL14A1Q05707 1796 aaKnown RBP12.95□□□□□ -0.34
IFT20-213ENST00000583796 N4BP2Q86UW6 1770 aaPredicted RBP12.95□□□□□ -0.34
IFT20-213ENST00000583796 PXDNLA1KZ92 1463 aa12.94□□□□□ -0.34
IFT20-213ENST00000583796 INTS3Q68E01 1043 aaKnown RBP12.94□□□□□ -0.34
IFT20-213ENST00000583796 CHRNA2Q15822 529 aa12.93□□□□□ -0.34
IFT20-213ENST00000583796 IFNL2Q8IZJ0 200 aa12.93□□□□□ -0.34
IFT20-213ENST00000583796 CARD10Q9BWT7 1032 aa12.93□□□□□ -0.34
IFT20-213ENST00000583796 ZBTB7BO15156 539 aaPredicted RBP12.92□□□□□ -0.34
IFT20-213ENST00000583796 PLEKHG5O94827 1062 aa12.92□□□□□ -0.34
IFT20-213ENST00000583796 PHKG2P15735 406 aa12.92□□□□□ -0.34
IFT20-213ENST00000583796 PCDHB15Q9Y5E8 787 aa12.92□□□□□ -0.34
IFT20-213ENST00000583796 HEG1Q9ULI3 1381 aa12.92□□□□□ -0.34
IFT20-213ENST00000583796 BTBD11A6QL63 1104 aa12.91□□□□□ -0.34
IFT20-213ENST00000583796 IGHDP01880 384 aa12.91□□□□□ -0.34
IFT20-213ENST00000583796 EIF4A1P60842 406 aaKnown RBP12.91□□□□□ -0.34
IFT20-213ENST00000583796 KRT24Q2M2I5 525 aa12.91□□□□□ -0.34
IFT20-213ENST00000583796 DCAF5Q96JK2 942 aa12.91□□□□□ -0.34
IFT20-213ENST00000583796 MIS18AQ9NYP9 233 aa12.91□□□□□ -0.34
IFT20-213ENST00000583796 RBM19Q9Y4C8 960 aaKnown RBP12.91□□□□□ -0.34
IFT20-213ENST00000583796 PCDH11XQ9BZA7 1347 aa12.91□□□□□ -0.34
IFT20-213ENST00000583796 PCDH11YQ9BZA8 1340 aa12.91□□□□□ -0.34
IFT20-213ENST00000583796 COL16A1Q07092 1604 aaPredicted RBP12.91□□□□□ -0.34
IFT20-213ENST00000583796 CCT4P50991 539 aaKnown RBP12.91□□□□□ -0.34
IFT20-213ENST00000583796 MPRIPQ6WCQ1 1025 aa12.91□□□□□ -0.34
IFT20-213ENST00000583796 LGR6Q9HBX8 967 aa12.91□□□□□ -0.34
IFT20-213ENST00000583796 PLCH1Q4KWH8 1693 aa12.9□□□□□ -0.34
IFT20-213ENST00000583796 KDM6AO15550 1401 aaPredicted RBP12.9□□□□□ -0.34
IFT20-213ENST00000583796 TOM1L2Q6ZVM7 507 aa12.9□□□□□ -0.34
IFT20-213ENST00000583796 PHLPP1O60346 1717 aa12.89□□□□□ -0.35
IFT20-213ENST00000583796 HDGFL1Q5TGJ6 251 aa12.89□□□□□ -0.35
IFT20-213ENST00000583796 REM2Q8IYK8 340 aaPredicted RBP12.89□□□□□ -0.35
IFT20-213ENST00000583796 SLC52A2Q9HAB3 445 aa12.89□□□□□ -0.35
IFT20-213ENST00000583796 TOM1O60784 492 aa12.88□□□□□ -0.35
IFT20-213ENST00000583796 IL2RBP14784 551 aa12.88□□□□□ -0.35
IFT20-213ENST00000583796 FLIIQ13045 1269 aa12.88□□□□□ -0.35
IFT20-213ENST00000583796 SMC5Q8IY18 1101 aa12.88□□□□□ -0.35
IFT20-213ENST00000583796 SPDYE2BA6NHP3 402 aa12.87□□□□□ -0.35
IFT20-213ENST00000583796 SPDYE6P0CI01 402 aa12.87□□□□□ -0.35
IFT20-213ENST00000583796 SPDYE2Q495Y8 402 aa12.87□□□□□ -0.35
IFT20-213ENST00000583796 GCC1Q96CN9 775 aa12.87□□□□□ -0.35
IFT20-213ENST00000583796 NKX1-1Q15270 411 aaPredicted RBP12.86□□□□□ -0.35
IFT20-213ENST00000583796 ZCRB1Q8TBF4 217 aaKnown RBP12.86□□□□□ -0.35
IFT20-213ENST00000583796 DBF4Q9UBU7 674 aaPredicted RBP12.86□□□□□ -0.35
IFT20-213ENST00000583796 SHANK3Q9BYB0 1731 aa12.86□□□□□ -0.35
IFT20-213ENST00000583796 IBTKQ9P2D0 1353 aaPredicted RBP12.86□□□□□ -0.35
IFT20-213ENST00000583796 CYP27B1O15528 508 aa12.85□□□□□ -0.35
IFT20-213ENST00000583796 GIGYF1O75420 1035 aaPredicted RBP12.85□□□□□ -0.35
IFT20-213ENST00000583796 EVA1CP58658 441 aa12.85□□□□□ -0.35
IFT20-213ENST00000583796 RPAP2Q8IXW5 612 aaPredicted RBP12.85□□□□□ -0.35
IFT20-213ENST00000583796 LRP6O75581 1613 aa12.85□□□□□ -0.35
IFT20-213ENST00000583796 ERVV-2B6SEH9 535 aa12.85□□□□□ -0.35
IFT20-213ENST00000583796 FKBP5Q13451 457 aaPredicted RBP12.85□□□□□ -0.35
IFT20-213ENST00000583796 ZNF790Q6PG37 636 aa12.85□□□□□ -0.35
IFT20-213ENST00000583796 BACH2Q9BYV9 841 aa12.85□□□□□ -0.35
IFT20-213ENST00000583796 NWD2Q9ULI1 1742 aa12.84□□□□□ -0.35
IFT20-213ENST00000583796 LAMB4A4D0S4 1761 aa12.84□□□□□ -0.35
IFT20-213ENST00000583796 WNK3Q9BYP7 1800 aa12.84□□□□□ -0.35
IFT20-213ENST00000583796 PAPPAQ13219 1627 aa12.84□□□□□ -0.35
IFT20-213ENST00000583796 ATP10DQ9P241 1426 aa12.84□□□□□ -0.35
IFT20-213ENST00000583796 PDE4AP27815 886 aa12.84□□□□□ -0.35
IFT20-213ENST00000583796 FAM161AQ3B820 660 aa12.84□□□□□ -0.35
IFT20-213ENST00000583796 DISP2A7MBM2 1401 aa12.83□□□□□ -0.36
IFT20-213ENST00000583796 UBR2Q8IWV8 1755 aa12.83□□□□□ -0.36
IFT20-213ENST00000583796 GNAI3P08754 354 aa12.83□□□□□ -0.36
IFT20-213ENST00000583796 TTC5Q8N0Z6 440 aa12.83□□□□□ -0.36
IFT20-213ENST00000583796 PDZRN3Q9UPQ7 1066 aa12.83□□□□□ -0.36
IFT20-213ENST00000583796 LARP1Q6PKG0 1096 aaKnown RBP12.82□□□□□ -0.36
IFT20-213ENST00000583796 G2E3Q7L622 706 aa12.82□□□□□ -0.36
IFT20-213ENST00000583796 CDCA7Q9BWT1 371 aaPredicted RBP12.82□□□□□ -0.36
IFT20-213ENST00000583796 HYPKQ9NX55 129 aa12.82□□□□□ -0.36
IFT20-213ENST00000583796 BTG4Q9NY30 223 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms