RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 CHL1O00533 1208 aa12.15□□□□□ -0.46
UBBP4-201ENST00000583708 KCNQ2O43526 872 aa12.15□□□□□ -0.46
UBBP4-201ENST00000583708 APBA3O96018 575 aa12.15□□□□□ -0.46
UBBP4-201ENST00000583708 FAM182BQ5T319 152 aa12.15□□□□□ -0.46
UBBP4-201ENST00000583708 ILDR2Q71H61 639 aa12.15□□□□□ -0.46
UBBP4-201ENST00000583708 MCM10Q7L590 875 aa12.15□□□□□ -0.46
UBBP4-201ENST00000583708 UPF1Q92900 1129 aaKnown RBP eCLIP12.15□□□□□ -0.461e-8■□□□□ 9
UBBP4-201ENST00000583708 ACSBG1Q96GR2 724 aa12.15□□□□□ -0.46
UBBP4-201ENST00000583708 ZNF790Q6PG37 636 aa12.14□□□□□ -0.47
UBBP4-201ENST00000583708 TTC5Q8N0Z6 440 aa12.14□□□□□ -0.47
UBBP4-201ENST00000583708 ATG3Q9NT62 314 aa12.14□□□□□ -0.47
UBBP4-201ENST00000583708 RRP7AQ9Y3A4 280 aaKnown RBP12.14□□□□□ -0.47
UBBP4-201ENST00000583708 KAT6BQ8WYB5 2073 aa12.14□□□□□ -0.47
UBBP4-201ENST00000583708 ZNF853P0CG23 659 aa12.13□□□□□ -0.47
UBBP4-201ENST00000583708 FMNL2Q96PY5 1086 aa12.13□□□□□ -0.47
UBBP4-201ENST00000583708 MYH16Q9H6N6 1097 aa12.13□□□□□ -0.47
UBBP4-201ENST00000583708 NHSQ6T4R5 1651 aa12.13□□□□□ -0.47
UBBP4-201ENST00000583708 SCN11AQ9UI33 1791 aa12.13□□□□□ -0.47
UBBP4-201ENST00000583708 GOLGA2Q08379 1002 aa12.12□□□□□ -0.47
UBBP4-201ENST00000583708 DCTN1Q14203 1278 aa12.12□□□□□ -0.47
UBBP4-201ENST00000583708 ZNF521Q96K83 1311 aa12.11□□□□□ -0.47
UBBP4-201ENST00000583708 E9PSI1 815 aa12.11□□□□□ -0.47
UBBP4-201ENST00000583708 SOCS7O14512 581 aa12.11□□□□□ -0.47
UBBP4-201ENST00000583708 HOXB7P09629 217 aa12.11□□□□□ -0.47
UBBP4-201ENST00000583708 CAMKK2Q96RR4 588 aa12.11□□□□□ -0.47
UBBP4-201ENST00000583708 TSPYL4Q9UJ04 414 aa12.11□□□□□ -0.47
UBBP4-201ENST00000583708 ASAP1Q9ULH1 1129 aa12.11□□□□□ -0.47
UBBP4-201ENST00000583708 EP400Q96L91 3159 aa12.11□□□□□ -0.47
UBBP4-201ENST00000583708 SBF2Q86WG5 1849 aa12.11□□□□□ -0.47
UBBP4-201ENST00000583708 PALLDQ8WX93 1383 aa12.1□□□□□ -0.47
UBBP4-201ENST00000583708 LOC102724428A0A0B4J2F2 783 aa12.1□□□□□ -0.47
UBBP4-201ENST00000583708 SIK1P57059 783 aa12.1□□□□□ -0.47
UBBP4-201ENST00000583708 HNRNPUQ00839 825 aaKnown RBP eCLIP12.1□□□□□ -0.47
UBBP4-201ENST00000583708 ZBED9Q6R2W3 1325 aa12.1□□□□□ -0.47
UBBP4-201ENST00000583708 STARD3NLO95772 234 aa12.09□□□□□ -0.47
UBBP4-201ENST00000583708 SNRPA1P09661 255 aaKnown RBP12.09□□□□□ -0.47
UBBP4-201ENST00000583708 TXNRD1Q16881 649 aa12.09□□□□□ -0.47
UBBP4-201ENST00000583708 RC3H1Q5TC82 1133 aaKnown RBP12.09□□□□□ -0.47
UBBP4-201ENST00000583708 DLG5Q8TDM6 1919 aa12.08□□□□□ -0.48
UBBP4-201ENST00000583708 CT47B1P0C2W7 299 aaPredicted RBP12.08□□□□□ -0.48
UBBP4-201ENST00000583708 EIF4A1P60842 406 aaKnown RBP12.08□□□□□ -0.48
UBBP4-201ENST00000583708 ZNF428Q96B54 188 aa12.08□□□□□ -0.48
UBBP4-201ENST00000583708 THUMPD2Q9BTF0 503 aaKnown RBP12.08□□□□□ -0.48
UBBP4-201ENST00000583708 RGPD3A6NKT7 1758 aaPredicted RBP12.07□□□□□ -0.48
UBBP4-201ENST00000583708 RGPD4Q7Z3J3 1758 aa12.07□□□□□ -0.48
UBBP4-201ENST00000583708 HEG1Q9ULI3 1381 aa12.07□□□□□ -0.48
UBBP4-201ENST00000583708 ITGB4P16144 1822 aa12.07□□□□□ -0.48
UBBP4-201ENST00000583708 ATP6V1AP38606 617 aa12.07□□□□□ -0.48
UBBP4-201ENST00000583708 SLFN5Q08AF3 891 aa12.07□□□□□ -0.48
UBBP4-201ENST00000583708 NBPF14Q5TI25 921 aa12.07□□□□□ -0.48
UBBP4-201ENST00000583708 PTF1AQ7RTS3 328 aa12.07□□□□□ -0.48
UBBP4-201ENST00000583708 TRMT2AQ8IZ69 625 aaKnown RBP12.07□□□□□ -0.48
UBBP4-201ENST00000583708 DOT1LQ8TEK3 1739 aa12.07□□□□□ -0.48
UBBP4-201ENST00000583708 RBM42Q9BTD8 480 aaKnown RBP12.07□□□□□ -0.48
UBBP4-201ENST00000583708 CCNL1Q9UK58 526 aaPredicted RBP12.07□□□□□ -0.48
UBBP4-201ENST00000583708 ERBB4Q15303 1308 aa12.07□□□□□ -0.48
UBBP4-201ENST00000583708 ZNF831Q5JPB2 1677 aa12.06□□□□□ -0.48
UBBP4-201ENST00000583708 TOGARAM1Q9Y4F4 1720 aa12.06□□□□□ -0.48
UBBP4-201ENST00000583708 PTCD1O75127 700 aaKnown RBP12.06□□□□□ -0.48
UBBP4-201ENST00000583708 GIGYF1O75420 1035 aaPredicted RBP12.06□□□□□ -0.48
UBBP4-201ENST00000583708 EN1Q05925 392 aaPredicted RBP12.06□□□□□ -0.48
UBBP4-201ENST00000583708 SLC39A6Q13433 755 aa12.06□□□□□ -0.48
UBBP4-201ENST00000583708 PROM2Q8N271 834 aa12.06□□□□□ -0.48
UBBP4-201ENST00000583708 FLAD1Q8NFF5 587 aa12.06□□□□□ -0.48
UBBP4-201ENST00000583708 ZNF496Q96IT1 587 aaPredicted RBP12.06□□□□□ -0.48
UBBP4-201ENST00000583708 MBIPQ9NS73 344 aa12.06□□□□□ -0.48
UBBP4-201ENST00000583708 SALL2Q9Y467 1007 aaPredicted RBP12.06□□□□□ -0.48
UBBP4-201ENST00000583708 SIPA1L3O60292 1781 aaPredicted RBP12.05□□□□□ -0.48
UBBP4-201ENST00000583708 BTAF1O14981 1849 aa12.05□□□□□ -0.48
UBBP4-201ENST00000583708 LAS1LQ9Y4W2 734 aaKnown RBP12.05□□□□□ -0.48
UBBP4-201ENST00000583708 EZH2Q15910 746 aaKnown RBP12.04□□□□□ -0.48
UBBP4-201ENST00000583708 MIS18AQ9NYP9 233 aa12.04□□□□□ -0.48
UBBP4-201ENST00000583708 CNTNAP4Q9C0A0 1308 aa12.04□□□□□ -0.48
UBBP4-201ENST00000583708 TNS1Q9HBL0 1735 aaKnown RBP12.03□□□□□ -0.48
UBBP4-201ENST00000583708 RGL2O15211 777 aa12.03□□□□□ -0.48
UBBP4-201ENST00000583708 CYP19A1P11511 503 aaPredicted RBP12.03□□□□□ -0.48
UBBP4-201ENST00000583708 ADRA2BP18089 450 aa12.03□□□□□ -0.48
UBBP4-201ENST00000583708 DEFB132Q7Z7B7 95 aa12.03□□□□□ -0.48
UBBP4-201ENST00000583708 KCPQ6ZWJ8 1503 aa12.02□□□□□ -0.48
UBBP4-201ENST00000583708 PAPPAQ13219 1627 aa12.02□□□□□ -0.49
UBBP4-201ENST00000583708 KCNQ3O43525 872 aa12.02□□□□□ -0.49
UBBP4-201ENST00000583708 DUSP27Q5VZP5 1158 aa12.02□□□□□ -0.49
UBBP4-201ENST00000583708 SLC4A9Q96Q91 983 aa12.02□□□□□ -0.49
UBBP4-201ENST00000583708 LRRC4BQ9NT99 713 aa12.02□□□□□ -0.49
UBBP4-201ENST00000583708 STK32BQ9NY57 414 aa12.02□□□□□ -0.49
UBBP4-201ENST00000583708 FANCIQ9NVI1 1328 aa12.02□□□□□ -0.49
UBBP4-201ENST00000583708 CICQ96RK0 1608 aaPredicted RBP12.01□□□□□ -0.49
UBBP4-201ENST00000583708 LY75O60449 1722 aa12.01□□□□□ -0.49
UBBP4-201ENST00000583708 A0A087WZG4 1122 aa12.01□□□□□ -0.49
UBBP4-201ENST00000583708 RPS6KA4O75676 772 aa12.01□□□□□ -0.49
UBBP4-201ENST00000583708 IL6STP40189 918 aaPredicted RBP12.01□□□□□ -0.49
UBBP4-201ENST00000583708 ITPK1Q13572 414 aa12.01□□□□□ -0.49
UBBP4-201ENST00000583708 CCDC30Q5VVM6 783 aa12.01□□□□□ -0.49
UBBP4-201ENST00000583708 NPM2Q86SE8 214 aaKnown RBP12.01□□□□□ -0.49
UBBP4-201ENST00000583708 DNAJC10Q8IXB1 793 aa12.01□□□□□ -0.49
UBBP4-201ENST00000583708 CCDC87Q9NVE4 849 aa12.01□□□□□ -0.49
UBBP4-201ENST00000583708 VIRMAQ69YN4 1812 aaKnown RBP12.01□□□□□ -0.49
UBBP4-201ENST00000583708 SSFA2P28290 1259 aa12□□□□□ -0.49
UBBP4-201ENST00000583708 SLC15A2Q16348 729 aa12□□□□□ -0.49
UBBP4-201ENST00000583708 TWISTNBQ3B726 338 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms