RNA–Protein interactions for RNA: ENST00000583577.1

MKS1-212, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-212ENST00000583577 TGFB2P61812 414 aa13.33□□□□□ -0.28
MKS1-212ENST00000583577 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.33□□□□□ -0.28
MKS1-212ENST00000583577 PUS7Q96PZ0 661 aaKnown RBP13.33□□□□□ -0.28
MKS1-212ENST00000583577 MKRN1Q9UHC7 482 aaKnown RBP13.33□□□□□ -0.28
MKS1-212ENST00000583577 ITGB4P16144 1822 aa13.33□□□□□ -0.28
MKS1-212ENST00000583577 PALLDQ8WX93 1383 aa13.32□□□□□ -0.28
MKS1-212ENST00000583577 MLLT1Q03111 559 aaPredicted RBP13.32□□□□□ -0.28
MKS1-212ENST00000583577 CDCA8Q53HL2 280 aa13.32□□□□□ -0.28
MKS1-212ENST00000583577 KTN1Q86UP2 1357 aaKnown RBP13.32□□□□□ -0.28
MKS1-212ENST00000583577 ABHD8Q96I13 439 aa13.31□□□□□ -0.28
MKS1-212ENST00000583577 NSD3Q9BZ95 1437 aa13.3□□□□□ -0.28
MKS1-212ENST00000583577 MON2Q7Z3U7 1717 aa13.3□□□□□ -0.28
MKS1-212ENST00000583577 TMC1Q8TDI8 760 aa13.3□□□□□ -0.28
MKS1-212ENST00000583577 SSFA2P28290 1259 aa13.29□□□□□ -0.28
MKS1-212ENST00000583577 CTCFP49711 727 aaPredicted RBP13.29□□□□□ -0.28
MKS1-212ENST00000583577 MPRIPQ6WCQ1 1025 aa13.29□□□□□ -0.28
MKS1-212ENST00000583577 NME9Q86XW9 330 aa13.29□□□□□ -0.28
MKS1-212ENST00000583577 AIDAQ96BJ3 306 aa13.29□□□□□ -0.28
MKS1-212ENST00000583577 VEGFAP15692 232 aaPredicted RBP13.28□□□□□ -0.28
MKS1-212ENST00000583577 MEGF6O75095 1541 aa13.28□□□□□ -0.28
MKS1-212ENST00000583577 CCDC85CA6NKD9 419 aa13.27□□□□□ -0.29
MKS1-212ENST00000583577 LBX1P52954 281 aa13.27□□□□□ -0.29
MKS1-212ENST00000583577 TSHZ2Q9NRE2 1034 aa13.27□□□□□ -0.29
MKS1-212ENST00000583577 CCDC87Q9NVE4 849 aa13.27□□□□□ -0.29
MKS1-212ENST00000583577 USP31Q70CQ4 1352 aa13.27□□□□□ -0.29
MKS1-212ENST00000583577 GNPATO15228 680 aa13.26□□□□□ -0.29
MKS1-212ENST00000583577 HDGFL2Q7Z4V5 671 aaPredicted RBP13.26□□□□□ -0.29
MKS1-212ENST00000583577 IP6K1Q92551 441 aa13.26□□□□□ -0.29
MKS1-212ENST00000583577 TERF2IPQ9NYB0 399 aa13.26□□□□□ -0.29
MKS1-212ENST00000583577 MAP2P11137 1827 aaKnown RBP13.25□□□□□ -0.29
MKS1-212ENST00000583577 C4AP0C0L4 1744 aa13.25□□□□□ -0.29
MKS1-212ENST00000583577 DALRD3Q5D0E6 543 aaKnown RBP13.25□□□□□ -0.29
MKS1-212ENST00000583577 LINC00116Q8NCU8 138 aa13.25□□□□□ -0.29
MKS1-212ENST00000583577 SMARCC1Q92922 1105 aaPredicted RBP13.25□□□□□ -0.29
MKS1-212ENST00000583577 DCAF5Q96JK2 942 aa13.25□□□□□ -0.29
MKS1-212ENST00000583577 POLR3GLQ9BT43 218 aa13.25□□□□□ -0.29
MKS1-212ENST00000583577 SLC12A5Q9H2X9 1139 aa13.25□□□□□ -0.29
MKS1-212ENST00000583577 PIM2Q9P1W9 311 aa13.25□□□□□ -0.29
MKS1-212ENST00000583577 KCNA3P22001 575 aa13.24□□□□□ -0.29
MKS1-212ENST00000583577 CREBZFQ9NS37 354 aa13.24□□□□□ -0.29
MKS1-212ENST00000583577 VIRMAQ69YN4 1812 aaKnown RBP13.24□□□□□ -0.29
MKS1-212ENST00000583577 FKBP8Q14318 412 aa13.23□□□□□ -0.29
MKS1-212ENST00000583577 CD163L1Q9NR16 1453 aa13.23□□□□□ -0.29
MKS1-212ENST00000583577 TIAM2Q8IVF5 1701 aa13.22□□□□□ -0.29
MKS1-212ENST00000583577 GLTPD2A6NH11 291 aa13.22□□□□□ -0.29
MKS1-212ENST00000583577 RGS19P49795 217 aa13.22□□□□□ -0.29
MKS1-212ENST00000583577 RASSF7Q02833 373 aa13.22□□□□□ -0.29
MKS1-212ENST00000583577 USHBP1Q8N6Y0 703 aa13.22□□□□□ -0.29
MKS1-212ENST00000583577 KIF20BQ96Q89 1820 aa13.22□□□□□ -0.29
MKS1-212ENST00000583577 A0A1W2PP64 1363 aa13.21□□□□□ -0.29
MKS1-212ENST00000583577 NLGN1Q8N2Q7 840 aa13.21□□□□□ -0.29
MKS1-212ENST00000583577 PARP3Q9Y6F1 533 aa13.21□□□□□ -0.29
MKS1-212ENST00000583577 EDC4Q6P2E9 1401 aaKnown RBP13.21□□□□□ -0.3
MKS1-212ENST00000583577 CNTNAP1P78357 1384 aa13.2□□□□□ -0.3
MKS1-212ENST00000583577 WASHC2AQ641Q2 1341 aa13.2□□□□□ -0.3
MKS1-212ENST00000583577 LOC102724428A0A0B4J2F2 783 aa13.2□□□□□ -0.3
MKS1-212ENST00000583577 SIK1P57059 783 aa13.2□□□□□ -0.3
MKS1-212ENST00000583577 RAPGEF4Q8WZA2 1011 aa13.2□□□□□ -0.3
MKS1-212ENST00000583577 CFAP44Q96MT7 982 aa13.2□□□□□ -0.3
MKS1-212ENST00000583577 ZC3H4Q9UPT8 1303 aaKnown RBP13.19□□□□□ -0.3
MKS1-212ENST00000583577 VEGFBP49765 207 aa13.19□□□□□ -0.3
MKS1-212ENST00000583577 TRAPPC3LQ5T215 181 aa13.19□□□□□ -0.3
MKS1-212ENST00000583577 PIGBQ92521 554 aa13.19□□□□□ -0.3
MKS1-212ENST00000583577 PCDH11XQ9BZA7 1347 aa13.18□□□□□ -0.3
MKS1-212ENST00000583577 PCDH11YQ9BZA8 1340 aa13.18□□□□□ -0.3
MKS1-212ENST00000583577 HSPA8P11142 646 aaKnown RBP13.18□□□□□ -0.3
MKS1-212ENST00000583577 TATP17735 454 aaPredicted RBP13.18□□□□□ -0.3
MKS1-212ENST00000583577 CHRNA5P30532 468 aa13.18□□□□□ -0.3
MKS1-212ENST00000583577 HOXC9P31274 260 aa13.18□□□□□ -0.3
MKS1-212ENST00000583577 AMPHP49418 695 aa13.18□□□□□ -0.3
MKS1-212ENST00000583577 ITPK1Q13572 414 aa13.18□□□□□ -0.3
MKS1-212ENST00000583577 WBP1LQ9NX94 342 aa13.18□□□□□ -0.3
MKS1-212ENST00000583577 CGNL1Q0VF96 1302 aa13.17□□□□□ -0.3
MKS1-212ENST00000583577 POTECB2RU33 542 aa13.17□□□□□ -0.3
MKS1-212ENST00000583577 LMNB1P20700 586 aa13.17□□□□□ -0.3
MKS1-212ENST00000583577 ATP6V1AP38606 617 aa13.17□□□□□ -0.3
MKS1-212ENST00000583577 NBPF6Q5VWK0 638 aa13.17□□□□□ -0.3
MKS1-212ENST00000583577 CHADLQ6NUI6 762 aa13.17□□□□□ -0.3
MKS1-212ENST00000583577 NBPF4Q96M43 638 aa13.17□□□□□ -0.3
MKS1-212ENST00000583577 KIF7Q2M1P5 1343 aa13.16□□□□□ -0.3
MKS1-212ENST00000583577 RTCBQ9Y3I0 505 aaKnown RBP13.16□□□□□ -0.3
MKS1-212ENST00000583577 MAP3K19Q56UN5 1328 aa13.15□□□□□ -0.3
MKS1-212ENST00000583577 ZBED9Q6R2W3 1325 aa13.15□□□□□ -0.3
MKS1-212ENST00000583577 DICER1Q9UPY3 1922 aaKnown RBP13.15□□□□□ -0.3
MKS1-212ENST00000583577 CASP8AP2Q9UKL3 1982 aa13.15□□□□□ -0.3
MKS1-212ENST00000583577 CYP27B1O15528 508 aa13.15□□□□□ -0.3
MKS1-212ENST00000583577 GYS1P13807 737 aa13.15□□□□□ -0.3
MKS1-212ENST00000583577 FBLN1P23142 703 aa13.15□□□□□ -0.3
MKS1-212ENST00000583577 ARHGEF1Q92888 912 aaKnown RBP13.15□□□□□ -0.3
MKS1-212ENST00000583577 ANP32EQ9BTT0 268 aa13.15□□□□□ -0.3
MKS1-212ENST00000583577 MYH14Q7Z406 1995 aaKnown RBP13.14□□□□□ -0.31
MKS1-212ENST00000583577 KDM6AO15550 1401 aaPredicted RBP13.14□□□□□ -0.31
MKS1-212ENST00000583577 ANKRD26Q9UPS8 1709 aa13.14□□□□□ -0.31
MKS1-212ENST00000583577 POTEIP0CG38 1075 aa13.14□□□□□ -0.31
MKS1-212ENST00000583577 POTEJP0CG39 1038 aa13.14□□□□□ -0.31
MKS1-212ENST00000583577 RFC4P35249 363 aa13.14□□□□□ -0.31
MKS1-212ENST00000583577 PRKRIP1Q9H875 184 aaPredicted RBP13.14□□□□□ -0.31
MKS1-212ENST00000583577 DPY19L2Q6NUT2 758 aa13.13□□□□□ -0.31
MKS1-212ENST00000583577 ASAP1Q9ULH1 1129 aa13.13□□□□□ -0.31
MKS1-212ENST00000583577 HNRNPUQ00839 825 aaKnown RBP eCLIP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms