RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 PTPREP23469 700 aa11.65□□□□□ -0.54
PPP4R1-225ENST00000583438 EZH2Q15910 746 aaKnown RBP11.65□□□□□ -0.54
PPP4R1-225ENST00000583438 NUTM2GQ5VZR2 741 aa11.65□□□□□ -0.54
PPP4R1-225ENST00000583438 POLR3AO14802 1390 aaPredicted RBP11.65□□□□□ -0.55
PPP4R1-225ENST00000583438 SPATA31A1Q5TZJ5 1347 aa11.64□□□□□ -0.55
PPP4R1-225ENST00000583438 SSH2Q76I76 1423 aa11.64□□□□□ -0.55
PPP4R1-225ENST00000583438 FAM205CA6NFA0 338 aa11.64□□□□□ -0.55
PPP4R1-225ENST00000583438 TRIM66O15016 1216 aa11.64□□□□□ -0.55
PPP4R1-225ENST00000583438 PADI6Q6TGC4 694 aa11.64□□□□□ -0.55
PPP4R1-225ENST00000583438 AKAP12Q02952 1782 aa11.64□□□□□ -0.55
PPP4R1-225ENST00000583438 POTEB3A0JP26 581 aa11.63□□□□□ -0.55
PPP4R1-225ENST00000583438 BRPF1P55201 1214 aaPredicted RBP11.63□□□□□ -0.55
PPP4R1-225ENST00000583438 R3HDM1Q15032 1099 aaKnown RBP11.63□□□□□ -0.55
PPP4R1-225ENST00000583438 POTEBQ6S5H4 581 aa11.63□□□□□ -0.55
PPP4R1-225ENST00000583438 POTEEQ6S8J3 1075 aa11.63□□□□□ -0.55
PPP4R1-225ENST00000583438 DCAF11Q8TEB1 546 aa11.63□□□□□ -0.55
PPP4R1-225ENST00000583438 RGPD3A6NKT7 1758 aaPredicted RBP11.63□□□□□ -0.55
PPP4R1-225ENST00000583438 RGPD4Q7Z3J3 1758 aa11.63□□□□□ -0.55
PPP4R1-225ENST00000583438 GPRASP1Q5JY77 1395 aa11.63□□□□□ -0.55
PPP4R1-225ENST00000583438 A0A0G2JS52 829 aa11.62□□□□□ -0.55
PPP4R1-225ENST00000583438 PPP1R3GB7ZBB8 358 aa11.62□□□□□ -0.55
PPP4R1-225ENST00000583438 PRSS12P56730 875 aa11.62□□□□□ -0.55
PPP4R1-225ENST00000583438 MYT1Q01538 1121 aa11.62□□□□□ -0.55
PPP4R1-225ENST00000583438 TTC13Q8NBP0 860 aa11.62□□□□□ -0.55
PPP4R1-225ENST00000583438 NUDT16Q96DE0 195 aaKnown RBP11.62□□□□□ -0.55
PPP4R1-225ENST00000583438 CAMKK2Q96RR4 588 aa11.62□□□□□ -0.55
PPP4R1-225ENST00000583438 KCNK17Q96T54 332 aa11.62□□□□□ -0.55
PPP4R1-225ENST00000583438 PRDM11Q9NQV5 511 aa11.62□□□□□ -0.55
PPP4R1-225ENST00000583438 COL5A2P05997 1499 aaPredicted RBP11.62□□□□□ -0.55
PPP4R1-225ENST00000583438 SLIT3O75094 1523 aa11.61□□□□□ -0.55
PPP4R1-225ENST00000583438 BAG6P46379 1132 aa11.61□□□□□ -0.55
PPP4R1-225ENST00000583438 ZC3H6P61129 1189 aaKnown RBP11.61□□□□□ -0.55
PPP4R1-225ENST00000583438 CDCA7LQ96GN5 454 aa11.61□□□□□ -0.55
PPP4R1-225ENST00000583438 USP19O94966 1318 aa11.6□□□□□ -0.55
PPP4R1-225ENST00000583438 TRPM1Q7Z4N2 1603 aa11.6□□□□□ -0.55
PPP4R1-225ENST00000583438 TRIM37O94972 964 aa11.6□□□□□ -0.55
PPP4R1-225ENST00000583438 PSEN2P49810 448 aa11.6□□□□□ -0.55
PPP4R1-225ENST00000583438 SF3B2Q13435 895 aaKnown RBP11.6□□□□□ -0.55
PPP4R1-225ENST00000583438 FAM161AQ3B820 660 aa11.6□□□□□ -0.55
PPP4R1-225ENST00000583438 NBPF1Q3BBV0 1214 aa11.6□□□□□ -0.55
PPP4R1-225ENST00000583438 PTF1AQ7RTS3 328 aa11.6□□□□□ -0.55
PPP4R1-225ENST00000583438 NGDNQ8NEJ9 315 aaKnown RBP11.6□□□□□ -0.55
PPP4R1-225ENST00000583438 STRN4Q9NRL3 753 aa11.6□□□□□ -0.55
PPP4R1-225ENST00000583438 RBM27Q9P2N5 1060 aaKnown RBP11.6□□□□□ -0.55
PPP4R1-225ENST00000583438 FAM198AQ9UFP1 575 aa11.6□□□□□ -0.55
PPP4R1-225ENST00000583438 ACEP12821 1306 aa11.6□□□□□ -0.55
PPP4R1-225ENST00000583438 EIF3AQ14152 1382 aaKnown RBP11.59□□□□□ -0.55
PPP4R1-225ENST00000583438 LARP1Q6PKG0 1096 aaKnown RBP11.59□□□□□ -0.55
PPP4R1-225ENST00000583438 HS3ST6Q96QI5 342 aa11.59□□□□□ -0.55
PPP4R1-225ENST00000583438 CDK19Q9BWU1 502 aa11.59□□□□□ -0.55
PPP4R1-225ENST00000583438 AXIN2Q9Y2T1 843 aa11.59□□□□□ -0.55
PPP4R1-225ENST00000583438 MYOM1P52179 1685 aa11.59□□□□□ -0.55
PPP4R1-225ENST00000583438 PDE4DQ08499 809 aa11.58□□□□□ -0.56
PPP4R1-225ENST00000583438 NEUROD2Q15784 382 aa11.58□□□□□ -0.56
PPP4R1-225ENST00000583438 USP35Q9P2H5 1018 aa11.58□□□□□ -0.56
PPP4R1-225ENST00000583438 TSKSQ9UJT2 592 aa11.58□□□□□ -0.56
PPP4R1-225ENST00000583438 CPDO75976 1380 aa11.57□□□□□ -0.56
PPP4R1-225ENST00000583438 NBPF8Q3BBV2 869 aa11.57□□□□□ -0.56
PPP4R1-225ENST00000583438 ZNF687Q8N1G0 1237 aa11.57□□□□□ -0.56
PPP4R1-225ENST00000583438 PPIP5K1Q6PFW1 1433 aa11.57□□□□□ -0.56
PPP4R1-225ENST00000583438 MON2Q7Z3U7 1717 aa11.57□□□□□ -0.56
PPP4R1-225ENST00000583438 ARHGAP33O14559 1287 aa11.56□□□□□ -0.56
PPP4R1-225ENST00000583438 ADGRG1Q9Y653 693 aa11.56□□□□□ -0.56
PPP4R1-225ENST00000583438 NFAT5O94916 1531 aa11.55□□□□□ -0.56
PPP4R1-225ENST00000583438 LTN1O94822 1766 aa11.55□□□□□ -0.56
PPP4R1-225ENST00000583438 PLEKHG3A1L390 1219 aa11.55□□□□□ -0.56
PPP4R1-225ENST00000583438 PROX2Q3B8N5 592 aa11.55□□□□□ -0.56
PPP4R1-225ENST00000583438 DMRTA1Q5VZB9 504 aa11.55□□□□□ -0.56
PPP4R1-225ENST00000583438 PHOX2BQ99453 314 aa11.55□□□□□ -0.56
PPP4R1-225ENST00000583438 PDGFDQ9GZP0 370 aaPredicted RBP11.55□□□□□ -0.56
PPP4R1-225ENST00000583438 USP54Q70EL1 1684 aa11.55□□□□□ -0.56
PPP4R1-225ENST00000583438 USP6P35125 1406 aa11.54□□□□□ -0.56
PPP4R1-225ENST00000583438 TUBGCP6Q96RT7 1819 aa11.54□□□□□ -0.56
PPP4R1-225ENST00000583438 C3orf80F5H4A9 247 aa11.54□□□□□ -0.56
PPP4R1-225ENST00000583438 ZBED2Q9BTP6 218 aa11.54□□□□□ -0.56
PPP4R1-225ENST00000583438 GPBP1L1Q9HC44 474 aaPredicted RBP11.54□□□□□ -0.56
PPP4R1-225ENST00000583438 PAPPAQ13219 1627 aa11.53□□□□□ -0.56
PPP4R1-225ENST00000583438 TRIM6-TRIM34B2RNG4 842 aa11.53□□□□□ -0.56
PPP4R1-225ENST00000583438 APBA3O96018 575 aa11.53□□□□□ -0.56
PPP4R1-225ENST00000583438 AMHR2Q16671 573 aa11.53□□□□□ -0.56
PPP4R1-225ENST00000583438 UTRNP46939 3433 aa11.53□□□□□ -0.56
PPP4R1-225ENST00000583438 FAM196AQ6ZSG2 479 aa11.52□□□□□ -0.57
PPP4R1-225ENST00000583438 METTL3Q86U44 580 aaKnown RBP11.52□□□□□ -0.57
PPP4R1-225ENST00000583438 NHSQ6T4R5 1651 aa11.52□□□□□ -0.57
PPP4R1-225ENST00000583438 CRB1P82279 1406 aa11.52□□□□□ -0.57
PPP4R1-225ENST00000583438 PBX2P40425 430 aa11.51□□□□□ -0.57
PPP4R1-225ENST00000583438 PXYLP1Q8TE99 480 aa11.51□□□□□ -0.57
PPP4R1-225ENST00000583438 PARD3Q8TEW0 1356 aa11.51□□□□□ -0.57
PPP4R1-225ENST00000583438 RGPD2P0DJD1 1756 aa11.51□□□□□ -0.57
PPP4R1-225ENST00000583438 BTAF1O14981 1849 aa11.51□□□□□ -0.57
PPP4R1-225ENST00000583438 SHANK3Q9BYB0 1731 aa11.5□□□□□ -0.57
PPP4R1-225ENST00000583438 GCP02774 474 aa11.5□□□□□ -0.57
PPP4R1-225ENST00000583438 OATP04181 439 aa11.5□□□□□ -0.57
PPP4R1-225ENST00000583438 TCP11L2Q8N4U5 519 aa11.5□□□□□ -0.57
PPP4R1-225ENST00000583438 ABTB2Q8N961 1025 aa11.5□□□□□ -0.57
PPP4R1-225ENST00000583438 PARP9Q8IXQ6 854 aa11.49□□□□□ -0.57
PPP4R1-225ENST00000583438 NLRP7Q8WX94 980 aa11.49□□□□□ -0.57
PPP4R1-225ENST00000583438 REPIN1Q9BWE0 567 aaKnown RBP11.49□□□□□ -0.57
PPP4R1-225ENST00000583438 OVOS2A0A0G2JMS6 1433 aa11.49□□□□□ -0.57
PPP4R1-225ENST00000583438 OVOS2A0A0J9YW53 1432 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 177.7 ms