RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 CALD1Q05682 793 aaKnown RBP21.36■■□□□ 1.01
CDK5RAP3-228ENST00000583363 SPINK5Q9NQ38 1064 aaPredicted RBP21.36■■□□□ 1.01
CDK5RAP3-228ENST00000583363 SLFN5Q08AF3 891 aa21.35■■□□□ 1.01
CDK5RAP3-228ENST00000583363 PTF1AQ7RTS3 328 aa21.35■■□□□ 1.01
CDK5RAP3-228ENST00000583363 DCAF5Q96JK2 942 aa21.35■■□□□ 1.01
CDK5RAP3-228ENST00000583363 SPON1Q9HCB6 807 aa21.35■■□□□ 1.01
CDK5RAP3-228ENST00000583363 KCNQ2O43526 872 aa21.34■■□□□ 1.01
CDK5RAP3-228ENST00000583363 TRMT2AQ8IZ69 625 aaKnown RBP21.34■■□□□ 1.01
CDK5RAP3-228ENST00000583363 TNS2Q63HR2 1409 aa21.34■■□□□ 1.01
CDK5RAP3-228ENST00000583363 CEMIPQ8WUJ3 1361 aa21.34■■□□□ 1.01
CDK5RAP3-228ENST00000583363 E9PSI1 815 aa21.33■■□□□ 1.01
CDK5RAP3-228ENST00000583363 PLSCR1O15162 318 aa21.33■■□□□ 1.01
CDK5RAP3-228ENST00000583363 ZNF853P0CG23 659 aa21.33■■□□□ 1.01
CDK5RAP3-228ENST00000583363 MARCH10Q8NA82 808 aaPredicted RBP21.33■■□□□ 1.01
CDK5RAP3-228ENST00000583363 SHANK3Q9BYB0 1731 aa21.32■■□□□ 1
CDK5RAP3-228ENST00000583363 ANO8Q9HCE9 1232 aaPredicted RBP21.32■■□□□ 1
CDK5RAP3-228ENST00000583363 CASZ1Q86V15 1759 aa21.31■■□□□ 1
CDK5RAP3-228ENST00000583363 TAF7Q15545 349 aaPredicted RBP21.31■■□□□ 1
CDK5RAP3-228ENST00000583363 CFAP44Q96MT7 982 aa21.31■■□□□ 1
CDK5RAP3-228ENST00000583363 BCL11BQ9C0K0 894 aaPredicted RBP21.31■■□□□ 1
CDK5RAP3-228ENST00000583363 IFT57Q9NWB7 429 aa21.31■■□□□ 1
CDK5RAP3-228ENST00000583363 PPP1R1BQ9UD71 204 aaPredicted RBP21.31■■□□□ 1
CDK5RAP3-228ENST00000583363 KDM6AO15550 1401 aaPredicted RBP21.3■■□□□ 1
CDK5RAP3-228ENST00000583363 CHL1O00533 1208 aa21.3■■□□□ 1
CDK5RAP3-228ENST00000583363 GNAI1P63096 354 aa21.3■■□□□ 1
CDK5RAP3-228ENST00000583363 ERVV-2B6SEH9 535 aa21.29■■□□□ 1
CDK5RAP3-228ENST00000583363 YY1P25490 414 aa21.29■■□□□ 1
CDK5RAP3-228ENST00000583363 DUSP27Q5VZP5 1158 aa21.29■■□□□ 1
CDK5RAP3-228ENST00000583363 PROM2Q8N271 834 aa21.29■■□□□ 1
CDK5RAP3-228ENST00000583363 BABAM1Q9NWV8 329 aa21.29■■□□□ 1
CDK5RAP3-228ENST00000583363 LAS1LQ9Y4W2 734 aaKnown RBP21.29■■□□□ 1
CDK5RAP3-228ENST00000583363 TEFQ10587 303 aa21.28■■□□□ 1
CDK5RAP3-228ENST00000583363 MYH16Q9H6N6 1097 aa21.28■■□□□ 1
CDK5RAP3-228ENST00000583363 SLC52A2Q9HAB3 445 aa21.28■■□□□ 1
CDK5RAP3-228ENST00000583363 BCL9O00512 1426 aa21.28■■□□□ 1
CDK5RAP3-228ENST00000583363 ADAMTS7Q9UKP4 1686 aa21.28■■□□□ 1
CDK5RAP3-228ENST00000583363 NFATC2IPQ8NCF5 419 aa21.27■■□□□ 1
CDK5RAP3-228ENST00000583363 PDGFDQ9GZP0 370 aaPredicted RBP21.27■■□□□ 1
CDK5RAP3-228ENST00000583363 CABP4P57796 275 aa21.26■□□□□ 0.99
CDK5RAP3-228ENST00000583363 MIS18AQ9NYP9 233 aa21.26■□□□□ 0.99
CDK5RAP3-228ENST00000583363 SCN11AQ9UI33 1791 aa21.25■□□□□ 0.99
CDK5RAP3-228ENST00000583363 MBIPQ9NS73 344 aa21.25■□□□□ 0.99
CDK5RAP3-228ENST00000583363 TSR2Q969E8 191 aaKnown RBP21.24■□□□□ 0.99
CDK5RAP3-228ENST00000583363 BTBD11A6QL63 1104 aa21.23■□□□□ 0.99
CDK5RAP3-228ENST00000583363 TSPYL4Q9UJ04 414 aa21.23■□□□□ 0.99
CDK5RAP3-228ENST00000583363 FANCIQ9NVI1 1328 aa21.23■□□□□ 0.99
CDK5RAP3-228ENST00000583363 VIRMAQ69YN4 1812 aaKnown RBP21.22■□□□□ 0.99
CDK5RAP3-228ENST00000583363 CENPBP07199 599 aaPredicted RBP21.22■□□□□ 0.99
CDK5RAP3-228ENST00000583363 ZBTB7AO95365 584 aa21.2■□□□□ 0.98
CDK5RAP3-228ENST00000583363 PRIM1P49642 420 aaKnown RBP21.2■□□□□ 0.98
CDK5RAP3-228ENST00000583363 TXNRD1Q16881 649 aa21.2■□□□□ 0.98
CDK5RAP3-228ENST00000583363 MRC1P22897 1456 aa21.2■□□□□ 0.98
CDK5RAP3-228ENST00000583363 KCNQ3O43525 872 aa21.19■□□□□ 0.98
CDK5RAP3-228ENST00000583363 EXOSC9Q06265 439 aaKnown RBP21.19■□□□□ 0.98
CDK5RAP3-228ENST00000583363 PIGBQ92521 554 aa21.19■□□□□ 0.98
CDK5RAP3-228ENST00000583363 TMOD3Q9NYL9 352 aa21.19■□□□□ 0.98
CDK5RAP3-228ENST00000583363 DCAF8L1A6NGE4 600 aa21.18■□□□□ 0.98
CDK5RAP3-228ENST00000583363 PTGER2P43116 358 aa21.18■□□□□ 0.98
CDK5RAP3-228ENST00000583363 ACSBG1Q96GR2 724 aa21.18■□□□□ 0.98
CDK5RAP3-228ENST00000583363 NHSQ6T4R5 1651 aa21.18■□□□□ 0.98
CDK5RAP3-228ENST00000583363 SLC39A6Q13433 755 aa21.17■□□□□ 0.98
CDK5RAP3-228ENST00000583363 SIPA1L3O60292 1781 aaPredicted RBP21.17■□□□□ 0.98
CDK5RAP3-228ENST00000583363 KAT6BQ8WYB5 2073 aa21.17■□□□□ 0.98
CDK5RAP3-228ENST00000583363 TOGARAM1Q9Y4F4 1720 aa21.16■□□□□ 0.98
CDK5RAP3-228ENST00000583363 EIF4A1P60842 406 aaKnown RBP21.16■□□□□ 0.98
CDK5RAP3-228ENST00000583363 SLC15A2Q16348 729 aa21.16■□□□□ 0.98
CDK5RAP3-228ENST00000583363 ZNF790Q6PG37 636 aa21.16■□□□□ 0.98
CDK5RAP3-228ENST00000583363 STK32BQ9NY57 414 aa21.16■□□□□ 0.98
CDK5RAP3-228ENST00000583363 ATF5Q9Y2D1 282 aaPredicted RBP21.16■□□□□ 0.98
CDK5RAP3-228ENST00000583363 C8orf58Q8NAV2 365 aa21.15■□□□□ 0.98
CDK5RAP3-228ENST00000583363 SYTL4Q96C24 671 aaPredicted RBP21.15■□□□□ 0.98
CDK5RAP3-228ENST00000583363 ITGB4P16144 1822 aa21.13■□□□□ 0.97
CDK5RAP3-228ENST00000583363 CT47B1P0C2W7 299 aaPredicted RBP21.13■□□□□ 0.97
CDK5RAP3-228ENST00000583363 KRT24Q2M2I5 525 aa21.13■□□□□ 0.97
CDK5RAP3-228ENST00000583363 TSPYL6Q8N831 410 aa21.13■□□□□ 0.97
CDK5RAP3-228ENST00000583363 ATG3Q9NT62 314 aa21.13■□□□□ 0.97
CDK5RAP3-228ENST00000583363 VAMP4O75379 141 aa21.12■□□□□ 0.97
CDK5RAP3-228ENST00000583363 TTC5Q8N0Z6 440 aa21.12■□□□□ 0.97
CDK5RAP3-228ENST00000583363 ASAP1Q9ULH1 1129 aa21.12■□□□□ 0.97
CDK5RAP3-228ENST00000583363 ELL2O00472 640 aaPredicted RBP21.11■□□□□ 0.97
CDK5RAP3-228ENST00000583363 TWISTNBQ3B726 338 aaPredicted RBP21.11■□□□□ 0.97
CDK5RAP3-228ENST00000583363 PAPPAQ13219 1627 aa21.11■□□□□ 0.97
CDK5RAP3-228ENST00000583363 BTAF1O14981 1849 aa21.11■□□□□ 0.97
CDK5RAP3-228ENST00000583363 HEG1Q9ULI3 1381 aa21.1■□□□□ 0.97
CDK5RAP3-228ENST00000583363 KDM3BQ7LBC6 1761 aa21.1■□□□□ 0.97
CDK5RAP3-228ENST00000583363 ZNF496Q96IT1 587 aaPredicted RBP21.1■□□□□ 0.97
CDK5RAP3-228ENST00000583363 SGIP1Q9BQI5 828 aa21.1■□□□□ 0.97
CDK5RAP3-228ENST00000583363 DOT1LQ8TEK3 1739 aa21.09■□□□□ 0.97
CDK5RAP3-228ENST00000583363 UTRNP46939 3433 aa21.09■□□□□ 0.97
CDK5RAP3-228ENST00000583363 FMNL2Q96PY5 1086 aa21.09■□□□□ 0.97
CDK5RAP3-228ENST00000583363 FHDC1Q9C0D6 1143 aaPredicted RBP21.09■□□□□ 0.97
CDK5RAP3-228ENST00000583363 MTFR1LQ9H019 292 aa21.09■□□□□ 0.97
CDK5RAP3-228ENST00000583363 SOS1Q07889 1333 aaPredicted RBP21.08■□□□□ 0.97
CDK5RAP3-228ENST00000583363 GIGYF1O75420 1035 aaPredicted RBP21.08■□□□□ 0.97
CDK5RAP3-228ENST00000583363 SYT17Q9BSW7 474 aa21.08■□□□□ 0.97
CDK5RAP3-228ENST00000583363 RCAN3Q9UKA8 241 aa21.08■□□□□ 0.97
CDK5RAP3-228ENST00000583363 HOXB7P09629 217 aa21.07■□□□□ 0.96
CDK5RAP3-228ENST00000583363 ZNF428Q96B54 188 aa21.07■□□□□ 0.96
CDK5RAP3-228ENST00000583363 SMARCC1Q92922 1105 aaPredicted RBP21.06■□□□□ 0.96
CDK5RAP3-228ENST00000583363 PTCD1O75127 700 aaKnown RBP21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms