RNA–Protein interactions for RNA: ENST00000582981.5

TOP3A-214, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,239 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-214ENST00000582981 ANO2Q9NQ90 1003 aa12.78□□□□□ -0.36
TOP3A-214ENST00000582981 TMEM51Q9NW97 253 aa12.78□□□□□ -0.36
TOP3A-214ENST00000582981 LETM1O95202 739 aaPredicted RBP12.78□□□□□ -0.36
TOP3A-214ENST00000582981 PRR36Q9H6K5 1346 aa12.77□□□□□ -0.36
TOP3A-214ENST00000582981 NCBP3Q53F19 620 aaKnown RBP12.77□□□□□ -0.37
TOP3A-214ENST00000582981 TMEM63CQ9P1W3 806 aa12.77□□□□□ -0.37
TOP3A-214ENST00000582981 TSPYL4Q9UJ04 414 aa12.77□□□□□ -0.37
TOP3A-214ENST00000582981 CPS1P31327 1500 aa12.77□□□□□ -0.37
TOP3A-214ENST00000582981 ZNF710Q8N1W2 664 aa12.77□□□□□ -0.37
TOP3A-214ENST00000582981 C17orf53Q8N3J3 647 aaPredicted RBP12.77□□□□□ -0.37
TOP3A-214ENST00000582981 DDX54Q8TDD1 881 aaKnown RBP12.77□□□□□ -0.37
TOP3A-214ENST00000582981 PDLIM2Q96JY6 352 aa12.77□□□□□ -0.37
TOP3A-214ENST00000582981 KNDC1Q76NI1 1749 aa12.76□□□□□ -0.37
TOP3A-214ENST00000582981 ZNF445P59923 1031 aa12.76□□□□□ -0.37
TOP3A-214ENST00000582981 UNC5CLQ8IV45 518 aa12.76□□□□□ -0.37
TOP3A-214ENST00000582981 MYRIPQ8NFW9 859 aa12.76□□□□□ -0.37
TOP3A-214ENST00000582981 RTL1A6NKG5 1358 aa12.76□□□□□ -0.37
TOP3A-214ENST00000582981 ZFYVE9O95405 1425 aa12.76□□□□□ -0.37
TOP3A-214ENST00000582981 PNMA6EA0A0J9YXQ4 647 aa12.76□□□□□ -0.37
TOP3A-214ENST00000582981 IL25Q9H293 177 aa12.76□□□□□ -0.37
TOP3A-214ENST00000582981 ATP10DQ9P241 1426 aa12.76□□□□□ -0.37
TOP3A-214ENST00000582981 ST18O60284 1047 aa12.75□□□□□ -0.37
TOP3A-214ENST00000582981 CCDC61Q9Y6R9 512 aa12.75□□□□□ -0.37
TOP3A-214ENST00000582981 ALKQ9UM73 1620 aa12.75□□□□□ -0.37
TOP3A-214ENST00000582981 LMOD3Q0VAK6 560 aa12.75□□□□□ -0.37
TOP3A-214ENST00000582981 FKBP5Q13451 457 aaPredicted RBP12.75□□□□□ -0.37
TOP3A-214ENST00000582981 SLC26A8Q96RN1 970 aa12.75□□□□□ -0.37
TOP3A-214ENST00000582981 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.75□□□□□ -0.37
TOP3A-214ENST00000582981 PIK3R4Q99570 1358 aa12.74□□□□□ -0.37
TOP3A-214ENST00000582981 PDE1AP54750 535 aa12.74□□□□□ -0.37
TOP3A-214ENST00000582981 CASC1Q6TDU7 716 aa12.74□□□□□ -0.37
TOP3A-214ENST00000582981 NUTM1Q86Y26 1132 aa12.74□□□□□ -0.37
TOP3A-214ENST00000582981 TMX3Q96JJ7 454 aa12.74□□□□□ -0.37
TOP3A-214ENST00000582981 DIP2CQ9Y2E4 1556 aa12.74□□□□□ -0.37
TOP3A-214ENST00000582981 MCM5P33992 734 aa12.74□□□□□ -0.37
TOP3A-214ENST00000582981 BRPF1P55201 1214 aaPredicted RBP12.74□□□□□ -0.37
TOP3A-214ENST00000582981 KIF3AQ9Y496 699 aa12.74□□□□□ -0.37
TOP3A-214ENST00000582981 U2AF2P26368 475 aaKnown RBP eCLIP12.73□□□□□ -0.373e-6■■□□□ 13
TOP3A-214ENST00000582981 MTHFSDQ2M296 383 aaKnown RBP12.73□□□□□ -0.37
TOP3A-214ENST00000582981 PAXIP1Q6ZW49 1069 aaPredicted RBP12.73□□□□□ -0.37
TOP3A-214ENST00000582981 PDCL2Q8N4E4 241 aa12.73□□□□□ -0.37
TOP3A-214ENST00000582981 USHBP1Q8N6Y0 703 aa12.73□□□□□ -0.37
TOP3A-214ENST00000582981 ERC2O15083 957 aa12.73□□□□□ -0.37
TOP3A-214ENST00000582981 ANXA1P04083 346 aa12.73□□□□□ -0.37
TOP3A-214ENST00000582981 CPA1P15085 419 aa12.73□□□□□ -0.37
TOP3A-214ENST00000582981 NUCB2P80303 420 aa12.73□□□□□ -0.37
TOP3A-214ENST00000582981 PLCB2Q00722 1185 aa12.73□□□□□ -0.37
TOP3A-214ENST00000582981 C14orf37Q86TY3 774 aa12.73□□□□□ -0.37
TOP3A-214ENST00000582981 IPO4Q8TEX9 1081 aaKnown RBP12.73□□□□□ -0.37
TOP3A-214ENST00000582981 GADD45BO75293 160 aaPredicted RBP12.72□□□□□ -0.37
TOP3A-214ENST00000582981 ACEP12821 1306 aa12.72□□□□□ -0.37
TOP3A-214ENST00000582981 IBTKQ9P2D0 1353 aaPredicted RBP12.72□□□□□ -0.37
TOP3A-214ENST00000582981 RGS12O14924 1447 aa12.72□□□□□ -0.37
TOP3A-214ENST00000582981 CHL1O00533 1208 aa12.72□□□□□ -0.37
TOP3A-214ENST00000582981 RTF1Q92541 710 aaKnown RBP12.72□□□□□ -0.37
TOP3A-214ENST00000582981 MAP3K19Q56UN5 1328 aa12.72□□□□□ -0.37
TOP3A-214ENST00000582981 RPAP2Q8IXW5 612 aaPredicted RBP12.71□□□□□ -0.37
TOP3A-214ENST00000582981 EIF2S2P20042 333 aaKnown RBP12.71□□□□□ -0.37
TOP3A-214ENST00000582981 RBM33Q96EV2 1170 aaKnown RBP12.71□□□□□ -0.37
TOP3A-214ENST00000582981 ESF1Q9H501 851 aaKnown RBP12.71□□□□□ -0.37
TOP3A-214ENST00000582981 LRRFIP2Q9Y608 721 aaKnown RBP12.71□□□□□ -0.37
TOP3A-214ENST00000582981 REC8O95072 547 aa12.71□□□□□ -0.38
TOP3A-214ENST00000582981 CYP2E1P05181 493 aaPredicted RBP12.71□□□□□ -0.38
TOP3A-214ENST00000582981 TMEM131LA2VDJ0 1609 aa12.71□□□□□ -0.38
TOP3A-214ENST00000582981 HMGN5P82970 282 aaKnown RBP12.7□□□□□ -0.38
TOP3A-214ENST00000582981 CHMP4AQ9BY43 222 aa12.7□□□□□ -0.38
TOP3A-214ENST00000582981 TTC12Q9H892 705 aaPredicted RBP12.7□□□□□ -0.38
TOP3A-214ENST00000582981 BCL2L12Q9HB09 334 aa12.7□□□□□ -0.38
TOP3A-214ENST00000582981 DLG5Q8TDM6 1919 aa12.7□□□□□ -0.38
TOP3A-214ENST00000582981 EDC4Q6P2E9 1401 aaKnown RBP12.7□□□□□ -0.38
TOP3A-214ENST00000582981 TTC21BQ7Z4L5 1316 aa12.69□□□□□ -0.38
TOP3A-214ENST00000582981 NOLC1Q14978 699 aaKnown RBP eCLIP12.69□□□□□ -0.38
TOP3A-214ENST00000582981 LRSAM1Q6UWE0 723 aa12.69□□□□□ -0.38
TOP3A-214ENST00000582981 KIF20BQ96Q89 1820 aa12.69□□□□□ -0.38
TOP3A-214ENST00000582981 KCNJ4P48050 445 aa12.69□□□□□ -0.38
TOP3A-214ENST00000582981 MX1P20591 662 aa12.68□□□□□ -0.38
TOP3A-214ENST00000582981 AMPHP49418 695 aa12.68□□□□□ -0.38
TOP3A-214ENST00000582981 PRIMPOLQ96LW4 560 aa12.68□□□□□ -0.38
TOP3A-214ENST00000582981 PHAXQ9H814 394 aaKnown RBP12.68□□□□□ -0.38
TOP3A-214ENST00000582981 CHMP3Q9Y3E7 222 aa12.68□□□□□ -0.38
TOP3A-214ENST00000582981 NEO1Q92859 1461 aa12.68□□□□□ -0.38
TOP3A-214ENST00000582981 HMMRO75330 724 aa12.68□□□□□ -0.38
TOP3A-214ENST00000582981 TAF7LQ5H9L4 462 aa12.68□□□□□ -0.38
TOP3A-214ENST00000582981 ESYT1Q9BSJ8 1104 aa12.67□□□□□ -0.38
TOP3A-214ENST00000582981 STK31Q9BXU1 1019 aa12.67□□□□□ -0.38
TOP3A-214ENST00000582981 RIMBP3CA6NJZ7 1639 aa12.67□□□□□ -0.38
TOP3A-214ENST00000582981 RIMBP3BA6NNM3 1639 aa12.67□□□□□ -0.38
TOP3A-214ENST00000582981 RIMBP3Q9UFD9 1639 aa12.67□□□□□ -0.38
TOP3A-214ENST00000582981 GNAI2P04899 355 aa12.67□□□□□ -0.38
TOP3A-214ENST00000582981 CEBPAP49715 358 aaPredicted RBP12.67□□□□□ -0.38
TOP3A-214ENST00000582981 FLIIQ13045 1269 aa12.67□□□□□ -0.38
TOP3A-214ENST00000582981 LRRCC1Q9C099 1032 aa12.67□□□□□ -0.38
TOP3A-214ENST00000582981 SPG7Q9UQ90 795 aa12.67□□□□□ -0.38
TOP3A-214ENST00000582981 PREX1Q8TCU6 1659 aa12.67□□□□□ -0.38
TOP3A-214ENST00000582981 CPSF1Q10570 1443 aaKnown RBP12.66□□□□□ -0.38
TOP3A-214ENST00000582981 CDK12Q9NYV4 1490 aaPredicted RBP12.66□□□□□ -0.38
TOP3A-214ENST00000582981 ARHGAP31Q2M1Z3 1444 aa12.66□□□□□ -0.38
TOP3A-214ENST00000582981 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.66□□□□□ -0.38
TOP3A-214ENST00000582981 TRHP20396 242 aaPredicted RBP12.66□□□□□ -0.38
TOP3A-214ENST00000582981 NGDNQ8NEJ9 315 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms