RNA–Protein interactions for RNA: ENST00000582490.5

NDEL1-213, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-213ENST00000582490 CARD10Q9BWT7 1032 aa8.88□□□□□ -0.99
NDEL1-213ENST00000582490 ERBB3P21860 1342 aa8.87□□□□□ -0.99
NDEL1-213ENST00000582490 N4BP2Q86UW6 1770 aaPredicted RBP8.87□□□□□ -0.99
NDEL1-213ENST00000582490 PLEKHG3A1L390 1219 aa8.87□□□□□ -0.99
NDEL1-213ENST00000582490 TOMM70O94826 608 aa8.87□□□□□ -0.99
NDEL1-213ENST00000582490 HSPA1AP0DMV8 641 aaKnown RBP8.87□□□□□ -0.99
NDEL1-213ENST00000582490 HSPA1BP0DMV9 641 aaKnown RBP8.87□□□□□ -0.99
NDEL1-213ENST00000582490 NLRP6P59044 892 aa8.87□□□□□ -0.99
NDEL1-213ENST00000582490 NLRP13Q86W25 1043 aa8.87□□□□□ -0.99
NDEL1-213ENST00000582490 KDM2AQ9Y2K7 1162 aa8.87□□□□□ -0.99
NDEL1-213ENST00000582490 LY75O60449 1722 aa8.87□□□□□ -0.99
NDEL1-213ENST00000582490 PIK3C2AO00443 1686 aa8.87□□□□□ -0.99
NDEL1-213ENST00000582490 SLIT3O75094 1523 aa8.86□□□□□ -0.99
NDEL1-213ENST00000582490 ARHGEF25Q86VW2 580 aa8.86□□□□□ -0.99
NDEL1-213ENST00000582490 CABP2Q9NPB3 220 aa8.86□□□□□ -0.99
NDEL1-213ENST00000582490 TNS2Q63HR2 1409 aa8.86□□□□□ -0.99
NDEL1-213ENST00000582490 BRD4O60885 1362 aaPredicted RBP8.86□□□□□ -0.99
NDEL1-213ENST00000582490 IGSF1Q8N6C5 1336 aa8.85□□□□□ -0.99
NDEL1-213ENST00000582490 MPHOSPH9Q99550 1183 aa8.85□□□□□ -0.99
NDEL1-213ENST00000582490 CSB-PGBD3P0DP91 1061 aa8.84□□□□□ -0.99
NDEL1-213ENST00000582490 PRIM1P49642 420 aaKnown RBP8.84□□□□□ -0.99
NDEL1-213ENST00000582490 TMEM121BQ9BXQ6 578 aaPredicted RBP8.84□□□□□ -0.99
NDEL1-213ENST00000582490 NSD2O96028 1365 aa8.84□□□□□ -0.99
NDEL1-213ENST00000582490 TRPM1Q7Z4N2 1603 aa8.83□□□□□ -1
NDEL1-213ENST00000582490 KIAA1551Q9HCM1 1747 aa8.83□□□□□ -1
NDEL1-213ENST00000582490 PPIP5K1Q6PFW1 1433 aa8.83□□□□□ -1
NDEL1-213ENST00000582490 CD2APQ9Y5K6 639 aa8.83□□□□□ -1
NDEL1-213ENST00000582490 QRICH2Q9H0J4 1663 aa8.83□□□□□ -1
NDEL1-213ENST00000582490 TOGARAM1Q9Y4F4 1720 aa8.83□□□□□ -1
NDEL1-213ENST00000582490 TAF1LQ8IZX4 1826 aa8.82□□□□□ -1
NDEL1-213ENST00000582490 CPSF1Q10570 1443 aaKnown RBP8.82□□□□□ -1
NDEL1-213ENST00000582490 RGPD2P0DJD1 1756 aa8.82□□□□□ -1
NDEL1-213ENST00000582490 FAM161AQ3B820 660 aa8.82□□□□□ -1
NDEL1-213ENST00000582490 DDX54Q8TDD1 881 aaKnown RBP8.82□□□□□ -1
NDEL1-213ENST00000582490 CDCA7Q9BWT1 371 aaPredicted RBP8.82□□□□□ -1
NDEL1-213ENST00000582490 EIF3AQ14152 1382 aaKnown RBP8.82□□□□□ -1
NDEL1-213ENST00000582490 SBF1O95248 1867 aa8.81□□□□□ -1
NDEL1-213ENST00000582490 ABCC6O95255 1503 aa8.81□□□□□ -1
NDEL1-213ENST00000582490 DOT1LQ8TEK3 1739 aa8.81□□□□□ -1
NDEL1-213ENST00000582490 G3V3G9 751 aa8.81□□□□□ -1
NDEL1-213ENST00000582490 CABP1Q9NZU7 370 aa8.81□□□□□ -1
NDEL1-213ENST00000582490 SLC27A3Q5K4L6 730 aa8.8□□□□□ -1
NDEL1-213ENST00000582490 RBM46Q8TBY0 533 aaKnown RBP8.8□□□□□ -1
NDEL1-213ENST00000582490 SYTL4Q96C24 671 aaPredicted RBP8.8□□□□□ -1
NDEL1-213ENST00000582490 RRAGCQ9HB90 399 aa8.8□□□□□ -1
NDEL1-213ENST00000582490 NLRP2Q9NX02 1062 aa8.8□□□□□ -1
NDEL1-213ENST00000582490 USP54Q70EL1 1684 aa8.8□□□□□ -1
NDEL1-213ENST00000582490 TNRC18O15417 2968 aaPredicted RBP8.8□□□□□ -1
NDEL1-213ENST00000582490 NFAT5O94916 1531 aa8.8□□□□□ -1
NDEL1-213ENST00000582490 KCPQ6ZWJ8 1503 aa8.8□□□□□ -1
NDEL1-213ENST00000582490 PDE4DIPQ5VU43 2346 aa8.79□□□□□ -1
NDEL1-213ENST00000582490 DPY19L2Q6NUT2 758 aa8.79□□□□□ -1
NDEL1-213ENST00000582490 MARVELD3Q96A59 401 aa8.79□□□□□ -1
NDEL1-213ENST00000582490 CICQ96RK0 1608 aaPredicted RBP8.79□□□□□ -1
NDEL1-213ENST00000582490 UBR3Q6ZT12 1888 aa8.79□□□□□ -1
NDEL1-213ENST00000582490 A0A0G2JLW4 131 aa8.78□□□□□ -1
NDEL1-213ENST00000582490 FOXN1O15353 648 aa8.78□□□□□ -1
NDEL1-213ENST00000582490 NBPF1Q3BBV0 1214 aa8.78□□□□□ -1
NDEL1-213ENST00000582490 ARHGAP27Q6ZUM4 889 aa8.78□□□□□ -1
NDEL1-213ENST00000582490 DCAF11Q8TEB1 546 aa8.78□□□□□ -1
NDEL1-213ENST00000582490 CCNL1Q9UK58 526 aaPredicted RBP8.78□□□□□ -1
NDEL1-213ENST00000582490 BRCA1P38398 1863 aaKnown RBP8.78□□□□□ -1
NDEL1-213ENST00000582490 CCDC88AQ3V6T2 1871 aa8.78□□□□□ -1
NDEL1-213ENST00000582490 C5P01031 1676 aa8.78□□□□□ -1
NDEL1-213ENST00000582490 CCDC7Q96M83 1385 aa8.77□□□□□ -1.01
NDEL1-213ENST00000582490 LTN1O94822 1766 aa8.77□□□□□ -1.01
NDEL1-213ENST00000582490 CENPBP07199 599 aaPredicted RBP8.77□□□□□ -1.01
NDEL1-213ENST00000582490 IL2RBP14784 551 aa8.77□□□□□ -1.01
NDEL1-213ENST00000582490 AMER1Q5JTC6 1135 aaPredicted RBP8.77□□□□□ -1.01
NDEL1-213ENST00000582490 C9orf131Q5VYM1 1079 aa8.77□□□□□ -1.01
NDEL1-213ENST00000582490 FBLN1P23142 703 aa8.76□□□□□ -1.01
NDEL1-213ENST00000582490 SRPK2P78362 688 aaKnown RBP8.76□□□□□ -1.01
NDEL1-213ENST00000582490 BCS1LQ9Y276 419 aa8.76□□□□□ -1.01
NDEL1-213ENST00000582490 BOLA1Q9Y3E2 137 aa8.76□□□□□ -1.01
NDEL1-213ENST00000582490 PKD1L3Q7Z443 1732 aa8.76□□□□□ -1.01
NDEL1-213ENST00000582490 TTC21BQ7Z4L5 1316 aa8.76□□□□□ -1.01
NDEL1-213ENST00000582490 PXDNLA1KZ92 1463 aa8.76□□□□□ -1.01
NDEL1-213ENST00000582490 KIF13BQ9NQT8 1826 aa8.75□□□□□ -1.01
NDEL1-213ENST00000582490 PHF14O94880 888 aa8.75□□□□□ -1.01
NDEL1-213ENST00000582490 EMP3P54852 163 aa8.74□□□□□ -1.01
NDEL1-213ENST00000582490 FSTL1Q12841 308 aa8.74□□□□□ -1.01
NDEL1-213ENST00000582490 EFCAB3Q8N7B9 438 aa8.74□□□□□ -1.01
NDEL1-213ENST00000582490 ANKRD24Q8TF21 1146 aa8.74□□□□□ -1.01
NDEL1-213ENST00000582490 DPEP1P16444 411 aa8.73□□□□□ -1.01
NDEL1-213ENST00000582490 KCNA3P22001 575 aa8.73□□□□□ -1.01
NDEL1-213ENST00000582490 LTV1Q96GA3 475 aaPredicted RBP8.73□□□□□ -1.01
NDEL1-213ENST00000582490 MKRN1Q9UHC7 482 aaKnown RBP8.73□□□□□ -1.01
NDEL1-213ENST00000582490 C4BP0C0L5 1744 aa8.73□□□□□ -1.01
NDEL1-213ENST00000582490 ITGB4P16144 1822 aa8.73□□□□□ -1.01
NDEL1-213ENST00000582490 ANKRD36BQ8N2N9 1353 aa8.73□□□□□ -1.01
NDEL1-213ENST00000582490 KIAA1210Q9ULL0 1709 aa8.72□□□□□ -1.01
NDEL1-213ENST00000582490 C16orf71Q8IYS4 520 aaPredicted RBP8.72□□□□□ -1.01
NDEL1-213ENST00000582490 MAP2P11137 1827 aaKnown RBP8.71□□□□□ -1.01
NDEL1-213ENST00000582490 ARFGEF1Q9Y6D6 1849 aa8.71□□□□□ -1.01
NDEL1-213ENST00000582490 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.71□□□□□ -1.02
NDEL1-213ENST00000582490 POTECB2RU33 542 aa8.71□□□□□ -1.02
NDEL1-213ENST00000582490 NME9Q86XW9 330 aa8.71□□□□□ -1.02
NDEL1-213ENST00000582490 FAM208AQ9UK61 1670 aaKnown RBP8.71□□□□□ -1.02
NDEL1-213ENST00000582490 RIOK3O14730 519 aaKnown RBP8.7□□□□□ -1.02
NDEL1-213ENST00000582490 FCHSD2O94868 740 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms