RNA–Protein interactions for RNA: ENST00000582486.5

GGA3-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5 BASIC

Gene GGA3, Length 2,319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-213ENST00000582486 COL5A2P05997 1499 aaPredicted RBP14.18□□□□□ -0.14
GGA3-213ENST00000582486 VIRMAQ69YN4 1812 aaKnown RBP14.18□□□□□ -0.14
GGA3-213ENST00000582486 INTS3Q68E01 1043 aaKnown RBP14.17□□□□□ -0.14
GGA3-213ENST00000582486 IFNL2Q8IZJ0 200 aa14.17□□□□□ -0.14
GGA3-213ENST00000582486 CHMP4BQ9H444 224 aaKnown RBP14.17□□□□□ -0.14
GGA3-213ENST00000582486 STRN4Q9NRL3 753 aa14.17□□□□□ -0.14
GGA3-213ENST00000582486 HDAC1Q13547 482 aaPredicted RBP14.16□□□□□ -0.14
GGA3-213ENST00000582486 KDM3BQ7LBC6 1761 aa14.16□□□□□ -0.14
GGA3-213ENST00000582486 CYP27B1O15528 508 aa14.16□□□□□ -0.14
GGA3-213ENST00000582486 EVA1CP58658 441 aa14.16□□□□□ -0.14
GGA3-213ENST00000582486 HDGFL1Q5TGJ6 251 aa14.16□□□□□ -0.14
GGA3-213ENST00000582486 C1orf115Q9H7X2 142 aa14.16□□□□□ -0.14
GGA3-213ENST00000582486 EIF2S2P20042 333 aaKnown RBP14.15□□□□□ -0.14
GGA3-213ENST00000582486 LARP1Q6PKG0 1096 aaKnown RBP14.15□□□□□ -0.14
GGA3-213ENST00000582486 PLEKHG2Q9H7P9 1386 aa14.15□□□□□ -0.14
GGA3-213ENST00000582486 KDM6AO15550 1401 aaPredicted RBP14.15□□□□□ -0.14
GGA3-213ENST00000582486 F6X3S4 739 aa14.15□□□□□ -0.14
GGA3-213ENST00000582486 PDE4AP27815 886 aa14.15□□□□□ -0.14
GGA3-213ENST00000582486 FLIIQ13045 1269 aa14.15□□□□□ -0.14
GGA3-213ENST00000582486 CARD10Q9BWT7 1032 aa14.14□□□□□ -0.15
GGA3-213ENST00000582486 SLC52A2Q9HAB3 445 aa14.14□□□□□ -0.15
GGA3-213ENST00000582486 PDZRN3Q9UPQ7 1066 aa14.14□□□□□ -0.15
GGA3-213ENST00000582486 ADAMTS7Q9UKP4 1686 aa14.14□□□□□ -0.15
GGA3-213ENST00000582486 AHDC1Q5TGY3 1603 aaPredicted RBP14.14□□□□□ -0.15
GGA3-213ENST00000582486 HOXB7P09629 217 aa14.14□□□□□ -0.15
GGA3-213ENST00000582486 FKBP5Q13451 457 aaPredicted RBP14.13□□□□□ -0.15
GGA3-213ENST00000582486 SLC4A10Q6U841 1118 aa14.13□□□□□ -0.15
GGA3-213ENST00000582486 NFATC2IPQ8NCF5 419 aa14.13□□□□□ -0.15
GGA3-213ENST00000582486 DCAF5Q96JK2 942 aa14.13□□□□□ -0.15
GGA3-213ENST00000582486 BACH2Q9BYV9 841 aa14.13□□□□□ -0.15
GGA3-213ENST00000582486 BTG4Q9NY30 223 aa14.13□□□□□ -0.15
GGA3-213ENST00000582486 SIPA1L3O60292 1781 aaPredicted RBP14.12□□□□□ -0.15
GGA3-213ENST00000582486 PKD1L3Q7Z443 1732 aa14.12□□□□□ -0.15
GGA3-213ENST00000582486 ZCRB1Q8TBF4 217 aaKnown RBP14.12□□□□□ -0.15
GGA3-213ENST00000582486 SCN11AQ9UI33 1791 aa14.12□□□□□ -0.15
GGA3-213ENST00000582486 GIGYF1O75420 1035 aaPredicted RBP14.12□□□□□ -0.15
GGA3-213ENST00000582486 IL2RBP14784 551 aa14.12□□□□□ -0.15
GGA3-213ENST00000582486 SLC39A6Q13433 755 aa14.12□□□□□ -0.15
GGA3-213ENST00000582486 PHAXQ9H814 394 aaKnown RBP14.12□□□□□ -0.15
GGA3-213ENST00000582486 CACNA1FO60840 1977 aa14.11□□□□□ -0.15
GGA3-213ENST00000582486 HEG1Q9ULI3 1381 aa14.11□□□□□ -0.15
GGA3-213ENST00000582486 HSP90AB1P08238 724 aaKnown RBP14.11□□□□□ -0.15
GGA3-213ENST00000582486 ZNF790Q6PG37 636 aa14.11□□□□□ -0.15
GGA3-213ENST00000582486 SMC5Q8IY18 1101 aa14.11□□□□□ -0.15
GGA3-213ENST00000582486 CHPF2Q9P2E5 772 aa14.11□□□□□ -0.15
GGA3-213ENST00000582486 USP35Q9P2H5 1018 aa14.11□□□□□ -0.15
GGA3-213ENST00000582486 PRAMEF22A3QJZ6 481 aa14.1□□□□□ -0.15
GGA3-213ENST00000582486 SIRT2Q8IXJ6 389 aa14.1□□□□□ -0.15
GGA3-213ENST00000582486 CCT4P50991 539 aaKnown RBP14.1□□□□□ -0.15
GGA3-213ENST00000582486 PIP4K2BP78356 416 aa14.1□□□□□ -0.15
GGA3-213ENST00000582486 MEIS3Q99687 375 aa14.1□□□□□ -0.15
GGA3-213ENST00000582486 CHMP4AQ9BY43 222 aa14.1□□□□□ -0.15
GGA3-213ENST00000582486 PCDH11XQ9BZA7 1347 aa14.09□□□□□ -0.15
GGA3-213ENST00000582486 PCDH11YQ9BZA8 1340 aa14.09□□□□□ -0.15
GGA3-213ENST00000582486 PARP4Q9UKK3 1724 aaKnown RBP14.09□□□□□ -0.15
GGA3-213ENST00000582486 TOM1O60784 492 aa14.09□□□□□ -0.15
GGA3-213ENST00000582486 ANXA1P04083 346 aa14.09□□□□□ -0.15
GGA3-213ENST00000582486 CABP4P57796 275 aa14.08□□□□□ -0.16
GGA3-213ENST00000582486 COL22A1Q8NFW1 1626 aaPredicted RBP14.08□□□□□ -0.16
GGA3-213ENST00000582486 DDX54Q8TDD1 881 aaKnown RBP14.08□□□□□ -0.16
GGA3-213ENST00000582486 FAM161AQ3B820 660 aa14.07□□□□□ -0.16
GGA3-213ENST00000582486 DBF4Q9UBU7 674 aaPredicted RBP14.07□□□□□ -0.16
GGA3-213ENST00000582486 PHLPP1O60346 1717 aa14.06□□□□□ -0.16
GGA3-213ENST00000582486 MRC1P22897 1456 aa14.06□□□□□ -0.16
GGA3-213ENST00000582486 C8orf34Q49A92 452 aa14.06□□□□□ -0.16
GGA3-213ENST00000582486 ZNF496Q96IT1 587 aaPredicted RBP14.06□□□□□ -0.16
GGA3-213ENST00000582486 COL14A1Q05707 1796 aaKnown RBP14.06□□□□□ -0.16
GGA3-213ENST00000582486 ADAMTS2O95450 1211 aa14.06□□□□□ -0.16
GGA3-213ENST00000582486 NUCB1Q02818 461 aa14.06□□□□□ -0.16
GGA3-213ENST00000582486 PROSER3Q2NL68 480 aa14.06□□□□□ -0.16
GGA3-213ENST00000582486 TTC5Q8N0Z6 440 aa14.06□□□□□ -0.16
GGA3-213ENST00000582486 GCC1Q96CN9 775 aa14.06□□□□□ -0.16
GGA3-213ENST00000582486 COL16A1Q07092 1604 aaPredicted RBP14.05□□□□□ -0.16
GGA3-213ENST00000582486 PRKCSHP14314 528 aaPredicted RBP14.05□□□□□ -0.16
GGA3-213ENST00000582486 NKX1-1Q15270 411 aaPredicted RBP14.05□□□□□ -0.16
GGA3-213ENST00000582486 CEP85Q6P2H3 762 aa14.05□□□□□ -0.16
GGA3-213ENST00000582486 ANKRD44Q8N8A2 993 aa14.05□□□□□ -0.16
GGA3-213ENST00000582486 ATP10DQ9P241 1426 aa14.05□□□□□ -0.16
GGA3-213ENST00000582486 PI4KAP2A4QPH2 592 aa14.04□□□□□ -0.16
GGA3-213ENST00000582486 RPAP2Q8IXW5 612 aaPredicted RBP14.04□□□□□ -0.16
GGA3-213ENST00000582486 PI4KAP1Q8N8J0 262 aa14.04□□□□□ -0.16
GGA3-213ENST00000582486 LNPKQ9C0E8 428 aa14.04□□□□□ -0.16
GGA3-213ENST00000582486 ERVV-2B6SEH9 535 aa14.03□□□□□ -0.16
GGA3-213ENST00000582486 UBAP1LF5GYI3 381 aa14.03□□□□□ -0.16
GGA3-213ENST00000582486 ANKRD45Q5TZF3 282 aa14.03□□□□□ -0.16
GGA3-213ENST00000582486 CHD1LQ86WJ1 897 aa14.03□□□□□ -0.16
GGA3-213ENST00000582486 DNAAF4Q8WXU2 420 aa14.03□□□□□ -0.16
GGA3-213ENST00000582486 FMNL2Q96PY5 1086 aa14.03□□□□□ -0.16
GGA3-213ENST00000582486 RTN4Q9NQC3 1192 aaKnown RBP14.03□□□□□ -0.16
GGA3-213ENST00000582486 PXDNLA1KZ92 1463 aa14.03□□□□□ -0.16
GGA3-213ENST00000582486 SHANK3Q9BYB0 1731 aa14.02□□□□□ -0.16
GGA3-213ENST00000582486 NUTM2BA6NNL0 878 aaPredicted RBP14.02□□□□□ -0.16
GGA3-213ENST00000582486 NUTM2EB1AL46 878 aaPredicted RBP14.02□□□□□ -0.16
GGA3-213ENST00000582486 GNAI2P04899 355 aa14.02□□□□□ -0.16
GGA3-213ENST00000582486 SNRPA1P09661 255 aaKnown RBP14.02□□□□□ -0.16
GGA3-213ENST00000582486 PDIA6Q15084 440 aa14.02□□□□□ -0.16
GGA3-213ENST00000582486 NUTM2AQ8IVF1 878 aaPredicted RBP14.02□□□□□ -0.16
GGA3-213ENST00000582486 DDX21Q9NR30 783 aaKnown RBP eCLIP14.02□□□□□ -0.16
GGA3-213ENST00000582486 HYPKQ9NX55 129 aa14.02□□□□□ -0.16
GGA3-213ENST00000582486 GNAI3P08754 354 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 173.4 ms