RNA–Protein interactions for RNA: ENST00000582277.5

NDEL1-212, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3

Gene NDEL1, Length 749 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-212ENST00000582277 UPP2O95045 317 aa6.93□□□□□ -1.3
NDEL1-212ENST00000582277 ADD1P35611 737 aaKnown RBP6.93□□□□□ -1.3
NDEL1-212ENST00000582277 SENP2Q9HC62 589 aa6.93□□□□□ -1.3
NDEL1-212ENST00000582277 SUGT1Q9Y2Z0 365 aa6.93□□□□□ -1.3
NDEL1-212ENST00000582277 DHX9Q08211 1270 aaKnown RBP6.92□□□□□ -1.3
NDEL1-212ENST00000582277 TSGA10IPQ3SY00 556 aa6.92□□□□□ -1.3
NDEL1-212ENST00000582277 LINC00528Q8N1L1 170 aa6.92□□□□□ -1.3
NDEL1-212ENST00000582277 MEIOBQ8N635 442 aa6.92□□□□□ -1.3
NDEL1-212ENST00000582277 CCER1Q8TC90 406 aaPredicted RBP6.92□□□□□ -1.3
NDEL1-212ENST00000582277 GIPC2Q8TF65 315 aa6.92□□□□□ -1.3
NDEL1-212ENST00000582277 PCDHB11Q9Y5F2 797 aa6.92□□□□□ -1.3
NDEL1-212ENST00000582277 HSP90AB4PQ58FF6 505 aa6.91□□□□□ -1.3
NDEL1-212ENST00000582277 ESPNB1AK53 854 aa6.9□□□□□ -1.3
NDEL1-212ENST00000582277 MAFGO15525 162 aa6.9□□□□□ -1.3
NDEL1-212ENST00000582277 LILRA1O75019 489 aa6.9□□□□□ -1.3
NDEL1-212ENST00000582277 RAB11FIP3O75154 756 aa6.9□□□□□ -1.3
NDEL1-212ENST00000582277 SCTRP47872 440 aa6.9□□□□□ -1.3
NDEL1-212ENST00000582277 FGD1P98174 961 aa6.9□□□□□ -1.3
NDEL1-212ENST00000582277 ZNF662Q6ZS27 426 aa6.9□□□□□ -1.3
NDEL1-212ENST00000582277 DPH6Q7L8W6 267 aa6.9□□□□□ -1.3
NDEL1-212ENST00000582277 NOP9Q86U38 636 aaKnown RBP6.9□□□□□ -1.3
NDEL1-212ENST00000582277 KIFC2Q96AC6 838 aa6.9□□□□□ -1.3
NDEL1-212ENST00000582277 INSM2Q96T92 566 aaPredicted RBP6.9□□□□□ -1.3
NDEL1-212ENST00000582277 CDCA7Q9BWT1 371 aaPredicted RBP6.9□□□□□ -1.3
NDEL1-212ENST00000582277 CEP126Q9P2H0 1117 aa6.9□□□□□ -1.3
NDEL1-212ENST00000582277 SOCS7O14512 581 aa6.89□□□□□ -1.31
NDEL1-212ENST00000582277 MAN1A2O60476 641 aa6.89□□□□□ -1.31
NDEL1-212ENST00000582277 ATG7O95352 703 aa6.89□□□□□ -1.31
NDEL1-212ENST00000582277 EIF4G2P78344 907 aaKnown RBP eCLIP6.89□□□□□ -1.31
NDEL1-212ENST00000582277 CCDC181Q5TID7 509 aa6.89□□□□□ -1.31
NDEL1-212ENST00000582277 TSEN34Q9BSV6 310 aaKnown RBP6.89□□□□□ -1.31
NDEL1-212ENST00000582277 METTL14Q9HCE5 456 aaKnown RBP6.89□□□□□ -1.31
NDEL1-212ENST00000582277 CTSOP43234 321 aaPredicted RBP6.88□□□□□ -1.31
NDEL1-212ENST00000582277 HDGFL1Q5TGJ6 251 aa6.88□□□□□ -1.31
NDEL1-212ENST00000582277 Q6ZVU0 165 aa6.88□□□□□ -1.31
NDEL1-212ENST00000582277 CCDC85AQ96PX6 553 aaPredicted RBP6.88□□□□□ -1.31
NDEL1-212ENST00000582277 PPP1R12CQ9BZL4 782 aa6.88□□□□□ -1.31
NDEL1-212ENST00000582277 POLMQ9NP87 494 aaPredicted RBP6.88□□□□□ -1.31
NDEL1-212ENST00000582277 TMA7Q9Y2S6 64 aaKnown RBP6.88□□□□□ -1.31
NDEL1-212ENST00000582277 A0A0U1RQG5 324 aaPredicted RBP6.87□□□□□ -1.31
NDEL1-212ENST00000582277 MEN1O00255 615 aa6.87□□□□□ -1.31
NDEL1-212ENST00000582277 SEMA3FQ13275 785 aa6.87□□□□□ -1.31
NDEL1-212ENST00000582277 NOM1Q5C9Z4 860 aaKnown RBP6.87□□□□□ -1.31
NDEL1-212ENST00000582277 ESF1Q9H501 851 aaKnown RBP6.87□□□□□ -1.31
NDEL1-212ENST00000582277 SLC52A1Q9NWF4 448 aa6.87□□□□□ -1.31
NDEL1-212ENST00000582277 DNMT3LQ9UJW3 386 aa6.87□□□□□ -1.31
NDEL1-212ENST00000582277 TTLL8A6PVC2 850 aa6.86□□□□□ -1.31
NDEL1-212ENST00000582277 PIK3CDO00329 1044 aa6.86□□□□□ -1.31
NDEL1-212ENST00000582277 STAU1O95793 577 aaKnown RBP6.86□□□□□ -1.31
NDEL1-212ENST00000582277 ADH1AP07327 375 aa6.86□□□□□ -1.31
NDEL1-212ENST00000582277 MCCD1P59942 119 aaPredicted RBP6.86□□□□□ -1.31
NDEL1-212ENST00000582277 ANAPC15P60006 121 aa6.86□□□□□ -1.31
NDEL1-212ENST00000582277 SLFNL1Q499Z3 407 aa6.86□□□□□ -1.31
NDEL1-212ENST00000582277 OXLD1Q5BKU9 147 aa6.86□□□□□ -1.31
NDEL1-212ENST00000582277 RNF20Q5VTR2 975 aa6.86□□□□□ -1.31
NDEL1-212ENST00000582277 ADAMTS19Q8TE59 1207 aa6.86□□□□□ -1.31
NDEL1-212ENST00000582277 PLCD4Q9BRC7 762 aa6.86□□□□□ -1.31
NDEL1-212ENST00000582277 RAB6BQ9NRW1 208 aa6.86□□□□□ -1.31
NDEL1-212ENST00000582277 SOS2Q07890 1332 aaPredicted RBP6.85□□□□□ -1.31
NDEL1-212ENST00000582277 PTMSP20962 102 aa6.85□□□□□ -1.31
NDEL1-212ENST00000582277 RNF135Q8IUD6 432 aa6.85□□□□□ -1.31
NDEL1-212ENST00000582277 SEPT12Q8IYM1 358 aa6.85□□□□□ -1.31
NDEL1-212ENST00000582277 KDF1Q8NAX2 398 aaPredicted RBP6.85□□□□□ -1.31
NDEL1-212ENST00000582277 MORC4Q8TE76 937 aa6.85□□□□□ -1.31
NDEL1-212ENST00000582277 ATP5J2-PTCD1G3V325 749 aa6.84□□□□□ -1.31
NDEL1-212ENST00000582277 RECKO95980 971 aa6.84□□□□□ -1.31
NDEL1-212ENST00000582277 PTGIRP43119 386 aa6.84□□□□□ -1.31
NDEL1-212ENST00000582277 WASHC4Q2M389 1173 aa6.84□□□□□ -1.31
NDEL1-212ENST00000582277 NPAS4Q8IUM7 802 aa6.84□□□□□ -1.31
NDEL1-212ENST00000582277 MAGEC2Q9UBF1 373 aaPredicted RBP6.84□□□□□ -1.31
NDEL1-212ENST00000582277 SBNO2Q9Y2G9 1366 aa6.83□□□□□ -1.32
NDEL1-212ENST00000582277 PALM3A6NDB9 673 aaPredicted RBP6.83□□□□□ -1.32
NDEL1-212ENST00000582277 HMGB1P1B2RPK0 211 aaPredicted RBP6.83□□□□□ -1.32
NDEL1-212ENST00000582277 TERTO14746 1132 aaKnown RBP6.83□□□□□ -1.32
NDEL1-212ENST00000582277 SPINT1O43278 529 aa6.83□□□□□ -1.32
NDEL1-212ENST00000582277 CENPBP07199 599 aaPredicted RBP6.83□□□□□ -1.32
NDEL1-212ENST00000582277 LMOD1P29536 600 aaPredicted RBP6.83□□□□□ -1.32
NDEL1-212ENST00000582277 MARSP56192 900 aaKnown RBP6.83□□□□□ -1.32
NDEL1-212ENST00000582277 PRICKLE2Q7Z3G6 844 aa6.83□□□□□ -1.32
NDEL1-212ENST00000582277 CUEDC1Q9NWM3 386 aaPredicted RBP6.83□□□□□ -1.32
NDEL1-212ENST00000582277 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.83□□□□□ -1.32
NDEL1-212ENST00000582277 DOLKQ9UPQ8 538 aa6.83□□□□□ -1.32
NDEL1-212ENST00000582277 A0A1W2PRU2 124 aa6.82□□□□□ -1.32
NDEL1-212ENST00000582277 WFS1O76024 890 aa6.82□□□□□ -1.32
NDEL1-212ENST00000582277 RHOQP17081 205 aa6.82□□□□□ -1.32
NDEL1-212ENST00000582277 ERCC5P28715 1186 aaPredicted RBP6.82□□□□□ -1.32
NDEL1-212ENST00000582277 ERVK-9P63128 1117 aa6.82□□□□□ -1.32
NDEL1-212ENST00000582277 SPTY2D1Q68D10 685 aaPredicted RBP6.82□□□□□ -1.32
NDEL1-212ENST00000582277 TREML4Q6UXN2 200 aa6.82□□□□□ -1.32
NDEL1-212ENST00000582277 OSBPL3Q9H4L5 887 aa6.82□□□□□ -1.32
NDEL1-212ENST00000582277 ARHGEF10LQ9HCE6 1279 aa6.82□□□□□ -1.32
NDEL1-212ENST00000582277 TLDC2A0PJX2 215 aa6.81□□□□□ -1.32
NDEL1-212ENST00000582277 MYCP01106 439 aaPredicted RBP6.81□□□□□ -1.32
NDEL1-212ENST00000582277 IGBP1P78318 339 aa6.81□□□□□ -1.32
NDEL1-212ENST00000582277 NFX1Q12986 1120 aaKnown RBP6.81□□□□□ -1.32
NDEL1-212ENST00000582277 LCE2AQ5TA79 106 aaPredicted RBP6.81□□□□□ -1.32
NDEL1-212ENST00000582277 LCE2CQ5TA81 110 aa6.81□□□□□ -1.32
NDEL1-212ENST00000582277 DEPDC4Q8N2C3 294 aa6.81□□□□□ -1.32
NDEL1-212ENST00000582277 PHTF2Q8N3S3 785 aa6.81□□□□□ -1.32
NDEL1-212ENST00000582277 LARGE2Q8N3Y3 721 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms