RNA–Protein interactions for RNA: ENST00000582104.5

SNX11-210, Transcript of sorting nexin 11, humanhuman

TSL 2 BASIC

Gene SNX11, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-210ENST00000582104 RGPD2P0DJD1 1756 aa17.89■□□□□ 0.45
SNX11-210ENST00000582104 KIF13BQ9NQT8 1826 aa17.88■□□□□ 0.45
SNX11-210ENST00000582104 PXDNLA1KZ92 1463 aa17.88■□□□□ 0.45
SNX11-210ENST00000582104 C16orf71Q8IYS4 520 aaPredicted RBP17.88■□□□□ 0.45
SNX11-210ENST00000582104 LTV1Q96GA3 475 aaPredicted RBP17.88■□□□□ 0.45
SNX11-210ENST00000582104 N4BP2Q86UW6 1770 aaPredicted RBP17.88■□□□□ 0.45
SNX11-210ENST00000582104 RRS1Q15050 365 aaKnown RBP17.87■□□□□ 0.45
SNX11-210ENST00000582104 NCBP3Q53F19 620 aaKnown RBP17.87■□□□□ 0.45
SNX11-210ENST00000582104 POLKQ9UBT6 870 aa17.87■□□□□ 0.45
SNX11-210ENST00000582104 PALLDQ8WX93 1383 aa17.87■□□□□ 0.45
SNX11-210ENST00000582104 PHF14O94880 888 aa17.86■□□□□ 0.45
SNX11-210ENST00000582104 SMIM5Q71RC9 77 aa17.86■□□□□ 0.45
SNX11-210ENST00000582104 IP6K1Q92551 441 aa17.86■□□□□ 0.45
SNX11-210ENST00000582104 AK7Q96M32 723 aa17.86■□□□□ 0.45
SNX11-210ENST00000582104 EMILIN1Q9Y6C2 1016 aa17.86■□□□□ 0.45
SNX11-210ENST00000582104 HSPA1AP0DMV8 641 aaKnown RBP17.85■□□□□ 0.45
SNX11-210ENST00000582104 HSPA1BP0DMV9 641 aaKnown RBP17.85■□□□□ 0.45
SNX11-210ENST00000582104 HMGB2P26583 209 aaKnown RBP17.85■□□□□ 0.45
SNX11-210ENST00000582104 MTHFSP49914 203 aa17.85■□□□□ 0.45
SNX11-210ENST00000582104 PKD1L3Q7Z443 1732 aa17.85■□□□□ 0.45
SNX11-210ENST00000582104 BCS1LQ9Y276 419 aa17.85■□□□□ 0.45
SNX11-210ENST00000582104 SMG6Q86US8 1419 aaKnown RBP17.84■□□□□ 0.45
SNX11-210ENST00000582104 MAP3K19Q56UN5 1328 aa17.84■□□□□ 0.45
SNX11-210ENST00000582104 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.84■□□□□ 0.45
SNX11-210ENST00000582104 KCPQ6ZWJ8 1503 aa17.83■□□□□ 0.45
SNX11-210ENST00000582104 PLEKHG2Q9H7P9 1386 aa17.83■□□□□ 0.45
SNX11-210ENST00000582104 ARHGAP27Q6ZUM4 889 aa17.83■□□□□ 0.44
SNX11-210ENST00000582104 CNKSR2Q8WXI2 1034 aa17.83■□□□□ 0.44
SNX11-210ENST00000582104 C10orf71Q711Q0 1435 aa17.82■□□□□ 0.44
SNX11-210ENST00000582104 BRCA1P38398 1863 aaKnown RBP17.82■□□□□ 0.44
SNX11-210ENST00000582104 COL3A1P02461 1466 aaPredicted RBP17.82■□□□□ 0.44
SNX11-210ENST00000582104 TNRC6CQ9HCJ0 1690 aaKnown RBP17.81■□□□□ 0.44
SNX11-210ENST00000582104 CCER2I3L3R5 266 aa17.81■□□□□ 0.44
SNX11-210ENST00000582104 SSFA2P28290 1259 aa17.81■□□□□ 0.44
SNX11-210ENST00000582104 PPM1GO15355 546 aaPredicted RBP17.8■□□□□ 0.44
SNX11-210ENST00000582104 C9orf131Q5VYM1 1079 aa17.8■□□□□ 0.44
SNX11-210ENST00000582104 ITGB4P16144 1822 aa17.79■□□□□ 0.44
SNX11-210ENST00000582104 TGFB2P61812 414 aa17.79■□□□□ 0.44
SNX11-210ENST00000582104 MRS2Q9HD23 443 aa17.79■□□□□ 0.44
SNX11-210ENST00000582104 ARFGEF1Q9Y6D6 1849 aa17.79■□□□□ 0.44
SNX11-210ENST00000582104 KDM2BQ8NHM5 1336 aa17.78■□□□□ 0.44
SNX11-210ENST00000582104 A0A0G2JLW4 131 aa17.78■□□□□ 0.44
SNX11-210ENST00000582104 MMP10P09238 476 aa17.78■□□□□ 0.44
SNX11-210ENST00000582104 MPRIPQ6WCQ1 1025 aa17.78■□□□□ 0.44
SNX11-210ENST00000582104 HOXC9P31274 260 aa17.77■□□□□ 0.44
SNX11-210ENST00000582104 HSP90AB2PQ58FF8 381 aa17.77■□□□□ 0.44
SNX11-210ENST00000582104 SMC1BQ8NDV3 1235 aa17.77■□□□□ 0.44
SNX11-210ENST00000582104 RRAGCQ9HB90 399 aa17.77■□□□□ 0.44
SNX11-210ENST00000582104 INSRP06213 1382 aa17.77■□□□□ 0.43
SNX11-210ENST00000582104 FCHSD2O94868 740 aa17.76■□□□□ 0.43
SNX11-210ENST00000582104 AMPHP49418 695 aa17.76■□□□□ 0.43
SNX11-210ENST00000582104 FLT4P35916 1363 aa17.76■□□□□ 0.43
SNX11-210ENST00000582104 LINC00116Q8NCU8 138 aa17.75■□□□□ 0.43
SNX11-210ENST00000582104 SMARCC1Q92922 1105 aaPredicted RBP17.75■□□□□ 0.43
SNX11-210ENST00000582104 DPEP1P16444 411 aa17.74■□□□□ 0.43
SNX11-210ENST00000582104 RTL1A6NKG5 1358 aa17.74■□□□□ 0.43
SNX11-210ENST00000582104 KIF24Q5T7B8 1368 aa17.74■□□□□ 0.43
SNX11-210ENST00000582104 PCDH11XQ9BZA7 1347 aa17.73■□□□□ 0.43
SNX11-210ENST00000582104 PCDH11YQ9BZA8 1340 aa17.73■□□□□ 0.43
SNX11-210ENST00000582104 KCNA4P22459 653 aa17.73■□□□□ 0.43
SNX11-210ENST00000582104 NBPF6Q5VWK0 638 aa17.73■□□□□ 0.43
SNX11-210ENST00000582104 USHBP1Q8N6Y0 703 aa17.73■□□□□ 0.43
SNX11-210ENST00000582104 PNISRQ8TF01 805 aaKnown RBP17.73■□□□□ 0.43
SNX11-210ENST00000582104 NBPF4Q96M43 638 aa17.73■□□□□ 0.43
SNX11-210ENST00000582104 SBF1O95248 1867 aa17.72■□□□□ 0.43
SNX11-210ENST00000582104 GNPATO15228 680 aa17.72■□□□□ 0.43
SNX11-210ENST00000582104 IL13P35225 146 aa17.72■□□□□ 0.43
SNX11-210ENST00000582104 EIF4A2Q14240 407 aaKnown RBP17.72■□□□□ 0.43
SNX11-210ENST00000582104 RAPGEF4Q8WZA2 1011 aa17.72■□□□□ 0.43
SNX11-210ENST00000582104 CFAP53Q96M91 514 aa17.72■□□□□ 0.43
SNX11-210ENST00000582104 RNF181Q9P0P0 153 aa17.72■□□□□ 0.43
SNX11-210ENST00000582104 C4AP0C0L4 1744 aa17.72■□□□□ 0.43
SNX11-210ENST00000582104 LOC102724428A0A0B4J2F2 783 aa17.7■□□□□ 0.42
SNX11-210ENST00000582104 DIAPH1O60610 1272 aaKnown RBP17.7■□□□□ 0.42
SNX11-210ENST00000582104 TATP17735 454 aaPredicted RBP17.7■□□□□ 0.42
SNX11-210ENST00000582104 SIK1P57059 783 aa17.7■□□□□ 0.42
SNX11-210ENST00000582104 CYP27B1O15528 508 aa17.69■□□□□ 0.42
SNX11-210ENST00000582104 KCNA3P22001 575 aa17.69■□□□□ 0.42
SNX11-210ENST00000582104 PIGBQ92521 554 aa17.69■□□□□ 0.42
SNX11-210ENST00000582104 CCDC87Q9NVE4 849 aa17.69■□□□□ 0.42
SNX11-210ENST00000582104 PCDH10Q9P2E7 1040 aa17.69■□□□□ 0.42
SNX11-210ENST00000582104 ITPK1Q13572 414 aa17.68■□□□□ 0.42
SNX11-210ENST00000582104 DCAF5Q96JK2 942 aa17.68■□□□□ 0.42
SNX11-210ENST00000582104 FAM9BQ8IZU0 186 aa17.67■□□□□ 0.42
SNX11-210ENST00000582104 NLGN1Q8N2Q7 840 aa17.66■□□□□ 0.42
SNX11-210ENST00000582104 ADAMTS8Q9UP79 889 aa17.66■□□□□ 0.42
SNX11-210ENST00000582104 U2SURPO15042 1029 aaKnown RBP17.65■□□□□ 0.42
SNX11-210ENST00000582104 EYA1Q99502 592 aa17.65■□□□□ 0.42
SNX11-210ENST00000582104 PIM2Q9P1W9 311 aa17.65■□□□□ 0.42
SNX11-210ENST00000582104 U2AF1L5P0DN76 240 aaPredicted RBP17.63■□□□□ 0.41
SNX11-210ENST00000582104 ATP6V1AP38606 617 aa17.63■□□□□ 0.41
SNX11-210ENST00000582104 U2AF1Q01081 240 aaKnown RBP eCLIP17.63■□□□□ 0.41
SNX11-210ENST00000582104 WDR43Q15061 677 aaKnown RBP eCLIP17.63■□□□□ 0.41
SNX11-210ENST00000582104 DALRD3Q5D0E6 543 aaKnown RBP17.63■□□□□ 0.41
SNX11-210ENST00000582104 AEBP1Q8IUX7 1158 aa17.63■□□□□ 0.41
SNX11-210ENST00000582104 NUDCQ9Y266 331 aa17.63■□□□□ 0.41
SNX11-210ENST00000582104 HMOX1P09601 288 aa17.62■□□□□ 0.41
SNX11-210ENST00000582104 TRAPPC3LQ5T215 181 aa17.62■□□□□ 0.41
SNX11-210ENST00000582104 PARP3Q9Y6F1 533 aa17.62■□□□□ 0.41
SNX11-210ENST00000582104 ZC3H4Q9UPT8 1303 aaKnown RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms