RNA–Protein interactions for RNA: ENST00000581698.1

ATPAF2-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-211ENST00000581698 AKAP4Q5JQC9 854 aa20.25■□□□□ 0.83
ATPAF2-211ENST00000581698 SMIM5Q71RC9 77 aa20.25■□□□□ 0.83
ATPAF2-211ENST00000581698 LINC00116Q8NCU8 138 aa20.25■□□□□ 0.83
ATPAF2-211ENST00000581698 UBR2Q8IWV8 1755 aa20.24■□□□□ 0.83
ATPAF2-211ENST00000581698 KCPQ6ZWJ8 1503 aa20.24■□□□□ 0.83
ATPAF2-211ENST00000581698 ZBTB7AO95365 584 aa20.24■□□□□ 0.83
ATPAF2-211ENST00000581698 MYH14Q7Z406 1995 aaKnown RBP20.23■□□□□ 0.83
ATPAF2-211ENST00000581698 LOC102724428A0A0B4J2F2 783 aa20.23■□□□□ 0.83
ATPAF2-211ENST00000581698 RNMTO43148 476 aaKnown RBP20.23■□□□□ 0.83
ATPAF2-211ENST00000581698 PRKAR2BP31323 418 aa20.23■□□□□ 0.83
ATPAF2-211ENST00000581698 SIK1P57059 783 aa20.23■□□□□ 0.83
ATPAF2-211ENST00000581698 HSP90AB1P08238 724 aaKnown RBP20.22■□□□□ 0.83
ATPAF2-211ENST00000581698 NFATC2IPQ8NCF5 419 aa20.22■□□□□ 0.83
ATPAF2-211ENST00000581698 C1orf141Q5JVX7 400 aa20.21■□□□□ 0.83
ATPAF2-211ENST00000581698 SMARCC1Q92922 1105 aaPredicted RBP20.21■□□□□ 0.83
ATPAF2-211ENST00000581698 CFAP53Q96M91 514 aa20.21■□□□□ 0.83
ATPAF2-211ENST00000581698 IL17REQ8NFR9 667 aa20.2■□□□□ 0.82
ATPAF2-211ENST00000581698 SLC52A2Q9HAB3 445 aa20.2■□□□□ 0.82
ATPAF2-211ENST00000581698 CEMIPQ8WUJ3 1361 aa20.2■□□□□ 0.82
ATPAF2-211ENST00000581698 MAP3K5Q99683 1374 aa20.2■□□□□ 0.82
ATPAF2-211ENST00000581698 DLG5Q8TDM6 1919 aa20.19■□□□□ 0.82
ATPAF2-211ENST00000581698 COL23A1Q86Y22 540 aaPredicted RBP20.19■□□□□ 0.82
ATPAF2-211ENST00000581698 PLEKHF1Q96S99 279 aa20.19■□□□□ 0.82
ATPAF2-211ENST00000581698 U2AF1L5P0DN76 240 aaPredicted RBP20.18■□□□□ 0.82
ATPAF2-211ENST00000581698 CABP4P57796 275 aa20.18■□□□□ 0.82
ATPAF2-211ENST00000581698 U2AF1Q01081 240 aaKnown RBP eCLIP20.18■□□□□ 0.82
ATPAF2-211ENST00000581698 RALBP1Q15311 655 aa20.18■□□□□ 0.82
ATPAF2-211ENST00000581698 SPON1Q9HCB6 807 aa20.18■□□□□ 0.82
ATPAF2-211ENST00000581698 ATF5Q9Y2D1 282 aaPredicted RBP20.18■□□□□ 0.82
ATPAF2-211ENST00000581698 FCHSD2O94868 740 aa20.16■□□□□ 0.82
ATPAF2-211ENST00000581698 PRKRIP1Q9H875 184 aaPredicted RBP20.16■□□□□ 0.82
ATPAF2-211ENST00000581698 SLC39A6Q13433 755 aa20.15■□□□□ 0.82
ATPAF2-211ENST00000581698 MTFR1LQ9H019 292 aa20.15■□□□□ 0.82
ATPAF2-211ENST00000581698 TFCP2L1Q9NZI6 479 aa20.15■□□□□ 0.82
ATPAF2-211ENST00000581698 MYBBP1AQ9BQG0 1328 aaKnown RBP20.15■□□□□ 0.82
ATPAF2-211ENST00000581698 C4AP0C0L4 1744 aa20.15■□□□□ 0.82
ATPAF2-211ENST00000581698 ATP6V1AP38606 617 aa20.14■□□□□ 0.81
ATPAF2-211ENST00000581698 GAS2L2Q8NHY3 880 aa20.13■□□□□ 0.81
ATPAF2-211ENST00000581698 NUDCQ9Y266 331 aa20.13■□□□□ 0.81
ATPAF2-211ENST00000581698 GNAT3A8MTJ3 354 aa20.12■□□□□ 0.81
ATPAF2-211ENST00000581698 PTCD1O75127 700 aaKnown RBP20.12■□□□□ 0.81
ATPAF2-211ENST00000581698 RBM42Q9BTD8 480 aaKnown RBP20.11■□□□□ 0.81
ATPAF2-211ENST00000581698 ZNF316A6NFI3 1004 aaPredicted RBP20.1■□□□□ 0.81
ATPAF2-211ENST00000581698 DCTN1Q14203 1278 aa20.1■□□□□ 0.81
ATPAF2-211ENST00000581698 CNTNAP4Q9C0A0 1308 aa20.09■□□□□ 0.81
ATPAF2-211ENST00000581698 KCNQ3O43525 872 aa20.09■□□□□ 0.81
ATPAF2-211ENST00000581698 CCDC184Q52MB2 194 aa20.09■□□□□ 0.81
ATPAF2-211ENST00000581698 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.08■□□□□ 0.81
ATPAF2-211ENST00000581698 MCM10Q7L590 875 aa20.08■□□□□ 0.81
ATPAF2-211ENST00000581698 SLC16A10Q8TF71 515 aa20.08■□□□□ 0.81
ATPAF2-211ENST00000581698 MSL1Q68DK7 614 aa20.07■□□□□ 0.8
ATPAF2-211ENST00000581698 INTS5Q6P9B9 1019 aaKnown RBP20.07■□□□□ 0.8
ATPAF2-211ENST00000581698 DNAJC10Q8IXB1 793 aa20.07■□□□□ 0.8
ATPAF2-211ENST00000581698 AK7Q96M32 723 aa20.07■□□□□ 0.8
ATPAF2-211ENST00000581698 KDM3BQ7LBC6 1761 aa20.07■□□□□ 0.8
ATPAF2-211ENST00000581698 GOLGB1Q14789 3259 aaKnown RBP20.07■□□□□ 0.8
ATPAF2-211ENST00000581698 GNPATO15228 680 aa20.06■□□□□ 0.8
ATPAF2-211ENST00000581698 PHF14O94880 888 aa20.06■□□□□ 0.8
ATPAF2-211ENST00000581698 RC3H1Q5TC82 1133 aaKnown RBP20.06■□□□□ 0.8
ATPAF2-211ENST00000581698 SSFA2P28290 1259 aa20.05■□□□□ 0.8
ATPAF2-211ENST00000581698 CRKLP46109 303 aaKnown RBP20.05■□□□□ 0.8
ATPAF2-211ENST00000581698 ZNF496Q96IT1 587 aaPredicted RBP20.05■□□□□ 0.8
ATPAF2-211ENST00000581698 UTRNP46939 3433 aa20.05■□□□□ 0.8
ATPAF2-211ENST00000581698 CYP19A1P11511 503 aaPredicted RBP20.04■□□□□ 0.8
ATPAF2-211ENST00000581698 FHDC1Q9C0D6 1143 aaPredicted RBP20.04■□□□□ 0.8
ATPAF2-211ENST00000581698 ZNF790Q6PG37 636 aa20.03■□□□□ 0.8
ATPAF2-211ENST00000581698 THUMPD2Q9BTF0 503 aaKnown RBP20.03■□□□□ 0.8
ATPAF2-211ENST00000581698 RPS6KA4O75676 772 aa20.02■□□□□ 0.8
ATPAF2-211ENST00000581698 NFE2L2Q16236 605 aa20.02■□□□□ 0.8
ATPAF2-211ENST00000581698 ARXQ96QS3 562 aa20.02■□□□□ 0.8
ATPAF2-211ENST00000581698 KIAA1551Q9HCM1 1747 aa20.02■□□□□ 0.79
ATPAF2-211ENST00000581698 HEG1Q9ULI3 1381 aa20.01■□□□□ 0.79
ATPAF2-211ENST00000581698 PRAMEF22A3QJZ6 481 aa20.01■□□□□ 0.79
ATPAF2-211ENST00000581698 ARHGEF1Q92888 912 aaKnown RBP20.01■□□□□ 0.79
ATPAF2-211ENST00000581698 SYT17Q9BSW7 474 aa20.01■□□□□ 0.79
ATPAF2-211ENST00000581698 HTATSF1O43719 755 aaKnown RBP20■□□□□ 0.79
ATPAF2-211ENST00000581698 TEFQ10587 303 aa20■□□□□ 0.79
ATPAF2-211ENST00000581698 FLAD1Q8NFF5 587 aa20■□□□□ 0.79
ATPAF2-211ENST00000581698 ADAMTS8Q9UP79 889 aa20■□□□□ 0.79
ATPAF2-211ENST00000581698 SOS1Q07889 1333 aaPredicted RBP20■□□□□ 0.79
ATPAF2-211ENST00000581698 MSH5O43196 834 aa19.99■□□□□ 0.79
ATPAF2-211ENST00000581698 CCDC146Q8IYE0 955 aa19.99■□□□□ 0.79
ATPAF2-211ENST00000581698 VSIG10Q8N0Z9 540 aa19.99■□□□□ 0.79
ATPAF2-211ENST00000581698 PPP1R1BQ9UD71 204 aaPredicted RBP19.99■□□□□ 0.79
ATPAF2-211ENST00000581698 ZBTB1Q9Y2K1 713 aa19.99■□□□□ 0.79
ATPAF2-211ENST00000581698 GYS1P13807 737 aa19.97■□□□□ 0.79
ATPAF2-211ENST00000581698 NLGN2Q8NFZ4 835 aa19.97■□□□□ 0.79
ATPAF2-211ENST00000581698 CCDC87Q9NVE4 849 aa19.97■□□□□ 0.79
ATPAF2-211ENST00000581698 MIS18AQ9NYP9 233 aa19.97■□□□□ 0.79
ATPAF2-211ENST00000581698 SRP68Q9UHB9 627 aaKnown RBP19.97■□□□□ 0.79
ATPAF2-211ENST00000581698 RTCBQ9Y3I0 505 aaKnown RBP19.97■□□□□ 0.79
ATPAF2-211ENST00000581698 KIF13BQ9NQT8 1826 aa19.97■□□□□ 0.79
ATPAF2-211ENST00000581698 BTBD11A6QL63 1104 aa19.96■□□□□ 0.79
ATPAF2-211ENST00000581698 LAMB4A4D0S4 1761 aa19.95■□□□□ 0.78
ATPAF2-211ENST00000581698 SCN7AQ01118 1682 aa19.95■□□□□ 0.78
ATPAF2-211ENST00000581698 ADRA2BP18089 450 aa19.95■□□□□ 0.78
ATPAF2-211ENST00000581698 TMPOP42166 694 aaKnown RBP19.95■□□□□ 0.78
ATPAF2-211ENST00000581698 RRP7AQ9Y3A4 280 aaKnown RBP19.95■□□□□ 0.78
ATPAF2-211ENST00000581698 USP42Q9H9J4 1324 aaKnown RBP19.95■□□□□ 0.78
ATPAF2-211ENST00000581698 TRAPPC3LQ5T215 181 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms