RNA–Protein interactions for RNA: ENST00000581335.1

NUP85-217, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-217ENST00000581335 HSP90AB2PQ58FF8 381 aa12.19□□□□□ -0.46
NUP85-217ENST00000581335 USHBP1Q8N6Y0 703 aa12.19□□□□□ -0.46
NUP85-217ENST00000581335 SLC16A10Q8TF71 515 aa12.19□□□□□ -0.46
NUP85-217ENST00000581335 RAPGEF4Q8WZA2 1011 aa12.19□□□□□ -0.46
NUP85-217ENST00000581335 KIF24Q5T7B8 1368 aa12.18□□□□□ -0.46
NUP85-217ENST00000581335 TUBGCP6Q96RT7 1819 aa12.18□□□□□ -0.46
NUP85-217ENST00000581335 COL24A1Q17RW2 1714 aa12.18□□□□□ -0.46
NUP85-217ENST00000581335 TATP17735 454 aaPredicted RBP12.18□□□□□ -0.46
NUP85-217ENST00000581335 KCNQ4P56696 695 aa12.18□□□□□ -0.46
NUP85-217ENST00000581335 CARD14Q9BXL6 1004 aa12.18□□□□□ -0.46
NUP85-217ENST00000581335 FLT4P35916 1363 aa12.18□□□□□ -0.46
NUP85-217ENST00000581335 TFCP2L1Q9NZI6 479 aa12.17□□□□□ -0.46
NUP85-217ENST00000581335 PNPLA7Q6ZV29 1317 aa12.16□□□□□ -0.46
NUP85-217ENST00000581335 MAP3K5Q99683 1374 aa12.16□□□□□ -0.46
NUP85-217ENST00000581335 MAP2P11137 1827 aaKnown RBP12.16□□□□□ -0.46
NUP85-217ENST00000581335 NSD3Q9BZ95 1437 aa12.15□□□□□ -0.46
NUP85-217ENST00000581335 POLD1P28340 1107 aa12.15□□□□□ -0.46
NUP85-217ENST00000581335 RYDENQ9NUL5 291 aaKnown RBP12.15□□□□□ -0.46
NUP85-217ENST00000581335 CCNL1Q9UK58 526 aaPredicted RBP12.15□□□□□ -0.46
NUP85-217ENST00000581335 EMILIN1Q9Y6C2 1016 aa12.15□□□□□ -0.46
NUP85-217ENST00000581335 CHD4Q14839 1912 aa12.15□□□□□ -0.46
NUP85-217ENST00000581335 PCDH11XQ9BZA7 1347 aa12.14□□□□□ -0.47
NUP85-217ENST00000581335 PCDH11YQ9BZA8 1340 aa12.14□□□□□ -0.47
NUP85-217ENST00000581335 CLSPNQ9HAW4 1339 aa12.14□□□□□ -0.47
NUP85-217ENST00000581335 ANKRD26Q9UPS8 1709 aa12.14□□□□□ -0.47
NUP85-217ENST00000581335 ITGB4P16144 1822 aa12.14□□□□□ -0.47
NUP85-217ENST00000581335 PPM1GO15355 546 aaPredicted RBP12.13□□□□□ -0.47
NUP85-217ENST00000581335 PKD1L3Q7Z443 1732 aa12.13□□□□□ -0.47
NUP85-217ENST00000581335 C5P01031 1676 aa12.13□□□□□ -0.47
NUP85-217ENST00000581335 TAF1LQ8IZX4 1826 aa12.12□□□□□ -0.47
NUP85-217ENST00000581335 CYP27B1O15528 508 aa12.12□□□□□ -0.47
NUP85-217ENST00000581335 HMGB2P26583 209 aaKnown RBP12.12□□□□□ -0.47
NUP85-217ENST00000581335 MPRIPQ6WCQ1 1025 aa12.12□□□□□ -0.47
NUP85-217ENST00000581335 PCGF6Q9BYE7 350 aa12.12□□□□□ -0.47
NUP85-217ENST00000581335 WASHC2AQ641Q2 1341 aa12.11□□□□□ -0.47
NUP85-217ENST00000581335 COL23A1Q86Y22 540 aaPredicted RBP12.11□□□□□ -0.47
NUP85-217ENST00000581335 TOGARAM1Q9Y4F4 1720 aa12.11□□□□□ -0.47
NUP85-217ENST00000581335 NCAPD2Q15021 1401 aa12.11□□□□□ -0.47
NUP85-217ENST00000581335 GPR162Q16538 588 aa12.1□□□□□ -0.47
NUP85-217ENST00000581335 ZNF784Q8NCA9 323 aaPredicted RBP12.1□□□□□ -0.47
NUP85-217ENST00000581335 SPG7Q9UQ90 795 aa12.1□□□□□ -0.47
NUP85-217ENST00000581335 PALLDQ8WX93 1383 aa12.09□□□□□ -0.47
NUP85-217ENST00000581335 SMARCC1Q92922 1105 aaPredicted RBP12.09□□□□□ -0.47
NUP85-217ENST00000581335 EYA1Q99502 592 aa12.09□□□□□ -0.47
NUP85-217ENST00000581335 POLR3GLQ9BT43 218 aa12.09□□□□□ -0.47
NUP85-217ENST00000581335 POLKQ9UBT6 870 aa12.09□□□□□ -0.47
NUP85-217ENST00000581335 FLAD1Q8NFF5 587 aa12.08□□□□□ -0.48
NUP85-217ENST00000581335 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.08□□□□□ -0.48
NUP85-217ENST00000581335 UTRNP46939 3433 aa12.08□□□□□ -0.48
NUP85-217ENST00000581335 C4BP0C0L5 1744 aa12.08□□□□□ -0.48
NUP85-217ENST00000581335 EIF4G2P78344 907 aaKnown RBP eCLIP12.07□□□□□ -0.48
NUP85-217ENST00000581335 NLGN2Q8NFZ4 835 aa12.07□□□□□ -0.48
NUP85-217ENST00000581335 PIGBQ92521 554 aa12.07□□□□□ -0.48
NUP85-217ENST00000581335 IFNL2Q8IZJ0 200 aa12.06□□□□□ -0.48
NUP85-217ENST00000581335 HSPA5P11021 654 aaKnown RBP12.05□□□□□ -0.48
NUP85-217ENST00000581335 PHKG2P15735 406 aa12.05□□□□□ -0.48
NUP85-217ENST00000581335 TNNT2P45379 298 aaPredicted RBP12.05□□□□□ -0.48
NUP85-217ENST00000581335 EIF4A2Q14240 407 aaKnown RBP12.05□□□□□ -0.48
NUP85-217ENST00000581335 MSL1Q68DK7 614 aa12.05□□□□□ -0.48
NUP85-217ENST00000581335 ZNF467Q7Z7K2 595 aaPredicted RBP12.05□□□□□ -0.48
NUP85-217ENST00000581335 PELP1Q8IZL8 1130 aaKnown RBP12.05□□□□□ -0.48
NUP85-217ENST00000581335 PANK3Q9H999 370 aa12.05□□□□□ -0.48
NUP85-217ENST00000581335 UBR3Q6ZT12 1888 aa12.05□□□□□ -0.48
NUP85-217ENST00000581335 CHADLQ6NUI6 762 aa12.04□□□□□ -0.48
NUP85-217ENST00000581335 AK7Q96M32 723 aa12.04□□□□□ -0.48
NUP85-217ENST00000581335 TMOD3Q9NYL9 352 aa12.04□□□□□ -0.48
NUP85-217ENST00000581335 LOC102724428A0A0B4J2F2 783 aa12.03□□□□□ -0.48
NUP85-217ENST00000581335 SIK1P57059 783 aa12.03□□□□□ -0.48
NUP85-217ENST00000581335 ASAP1Q9ULH1 1129 aa12.03□□□□□ -0.48
NUP85-217ENST00000581335 CD2APQ9Y5K6 639 aa12.03□□□□□ -0.48
NUP85-217ENST00000581335 PLEKHG2Q9H7P9 1386 aa12.03□□□□□ -0.48
NUP85-217ENST00000581335 GRIN3BO60391 1043 aa12.02□□□□□ -0.49
NUP85-217ENST00000581335 AMIGO3Q86WK7 504 aa12.02□□□□□ -0.49
NUP85-217ENST00000581335 LINC00116Q8NCU8 138 aa12.02□□□□□ -0.49
NUP85-217ENST00000581335 FARP1Q9Y4F1 1045 aaPredicted RBP12.02□□□□□ -0.49
NUP85-217ENST00000581335 IGSF1Q8N6C5 1336 aa12.02□□□□□ -0.49
NUP85-217ENST00000581335 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.01□□□□□ -0.49
NUP85-217ENST00000581335 PHF14O94880 888 aa12.01□□□□□ -0.49
NUP85-217ENST00000581335 YBX3P16989 372 aaKnown RBP eCLIP12.01□□□□□ -0.49
NUP85-217ENST00000581335 SSFA2P28290 1259 aa12.01□□□□□ -0.49
NUP85-217ENST00000581335 ATP6V1AP38606 617 aa12.01□□□□□ -0.49
NUP85-217ENST00000581335 PDAP1Q13442 181 aaKnown RBP12.01□□□□□ -0.49
NUP85-217ENST00000581335 SMIM5Q71RC9 77 aa12.01□□□□□ -0.49
NUP85-217ENST00000581335 TSPYL2Q9H2G4 693 aaPredicted RBP12.01□□□□□ -0.49
NUP85-217ENST00000581335 ATG3Q9NT62 314 aa12.01□□□□□ -0.49
NUP85-217ENST00000581335 ERVV-2B6SEH9 535 aa12□□□□□ -0.49
NUP85-217ENST00000581335 ITPK1Q13572 414 aa12□□□□□ -0.49
NUP85-217ENST00000581335 PLEKHO1Q53GL0 409 aaPredicted RBP12□□□□□ -0.49
NUP85-217ENST00000581335 CCER1Q8TC90 406 aaPredicted RBP12□□□□□ -0.49
NUP85-217ENST00000581335 GOLGB1Q14789 3259 aaKnown RBP11.99□□□□□ -0.49
NUP85-217ENST00000581335 HSP90AB1P08238 724 aaKnown RBP11.99□□□□□ -0.49
NUP85-217ENST00000581335 MORC1Q86VD1 984 aa11.99□□□□□ -0.49
NUP85-217ENST00000581335 DCAF5Q96JK2 942 aa11.99□□□□□ -0.49
NUP85-217ENST00000581335 PCDHB8Q9UN66 801 aa11.99□□□□□ -0.49
NUP85-217ENST00000581335 PCDHB13Q9Y5F0 798 aa11.99□□□□□ -0.49
NUP85-217ENST00000581335 ZNF831Q5JPB2 1677 aa11.99□□□□□ -0.49
NUP85-217ENST00000581335 GNPATO15228 680 aa11.98□□□□□ -0.49
NUP85-217ENST00000581335 C1QTNF8P60827 252 aa11.98□□□□□ -0.49
NUP85-217ENST00000581335 AMOTQ4VCS5 1084 aa11.98□□□□□ -0.49
NUP85-217ENST00000581335 MFRPQ9BY79 579 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 487 ms